AT4G30700 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G30700
Description Pentatricopeptide repeat (PPR) superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G30700 Pentatricopeptide repeat (PPR) superfamily protein 1 0.3 -0.31
2 AT5G04040 Patatin-like phospholipase family protein SUGAR-DEPENDENT1 -0.84 0.32 -0.3
3 AT5G57900 SKP1 interacting partner 1 SKP1 interacting partner 1 -0.83 0.32 -0.31
4 AT1G69070 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Nop14-like protein (InterPro:IPR007276); Has 69842 Blast
hits to 35213 proteins in 1572 species: Archae - 363;
Bacteria - 20593; Metazoa - 20851; Fungi - 8010; Plants -
2912; Viruses - 517; Other Eukaryotes - 16596 (source: NCBI
BLink).		 0.83 0.31 -0.33
5 AT1G69950 transposable element gene 0.83 0.33 -0.3
6 AT4G39530 Tetratricopeptide repeat (TPR)-like superfamily protein 0.82 0.3 -0.3
7 AT1G15510 Tetratricopeptide repeat (TPR)-like superfamily protein ARABIDOPSIS EARLY CHLOROPLAST
BIOGENESIS2, EARLY CHLOROPLAST
BIOGENESIS2, VANILLA CREAM 1		 0.81 0.29 -0.32
8 AT5G08610 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 PIGMENT DEFECTIVE 340 0.8 0.31 -0.31
9 AT3G14730 Pentatricopeptide repeat (PPR) superfamily protein 0.8 0.32 -0.33
10 AT4G20930 6-phosphogluconate dehydrogenase family protein -0.8 0.32 -0.31
11 AT1G18090 5'-3' exonuclease family protein 0.8 0.34 -0.32
12 AT5G64370 beta-ureidopropionase beta-ureidopropionase, PYRIMIDINE
3		 -0.79 0.32 -0.3
13 AT1G49670 ARP protein (REF) NQR -0.79 0.34 -0.32
14 AT3G53940 Mitochondrial substrate carrier family protein 0.79 0.32 -0.3
15 AT2G47710 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.79 0.31 -0.3
16 AT5G19920 Transducin/WD40 repeat-like superfamily protein 0.79 0.32 -0.3
17 AT5G50310 Galactose oxidase/kelch repeat superfamily protein 0.79 0.3 -0.29
18 AT3G17000 ubiquitin-conjugating enzyme 32 ubiquitin-conjugating enzyme 32 -0.79 0.33 -0.33
19 AT2G47990 transducin family protein / WD-40 repeat family protein EMBRYO SAC DEVELOPMENT ARREST 13,
EMBRYO SAC DEVELOPMENT ARREST 19,
SLOW WALKER1		 0.79 0.32 -0.33
20 AT1G58180 beta carbonic anhydrase 6 A. THALIANA BETA CARBONIC
ANHYDRASE 6, beta carbonic
anhydrase 6		 -0.79 0.3 -0.32
21 AT4G28085 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.79 0.29 -0.3
22 AT5G48180 nitrile specifier protein 5 nitrile specifier protein 5 -0.78 0.31 -0.32
23 AT2G31945 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 8 plant structures;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G05575.1); Has 61 Blast hits
to 61 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.78 0.3 -0.29
24 AT3G57940 Domain of unknown function (DUF1726) ;Putative ATPase
(DUF699)		 0.78 0.34 -0.32
25 AT2G01490 phytanoyl-CoA dioxygenase (PhyH) family protein -0.78 0.3 -0.31
26 AT4G18140 SCP1-like small phosphatase 4b SCP1-like small phosphatase 4b -0.78 0.34 -0.29
27 AT5G65860 ankyrin repeat family protein 0.78 0.32 -0.31
28 AT2G22400 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.77 0.3 -0.31
29 AT1G44770 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G49710.3); Has 81 Blast hits
to 81 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.77 0.31 -0.28
30 AT5G42050 DCD (Development and Cell Death) domain protein -0.77 0.34 -0.32
31 AT2G29760 Tetratricopeptide repeat (TPR)-like superfamily protein ORGANELLE TRANSCRIPT PROCESSING 81 0.77 0.33 -0.31
32 AT1G73740 UDP-Glycosyltransferase superfamily protein -0.77 0.35 -0.31
33 AT3G57490 Ribosomal protein S5 family protein 0.77 0.28 -0.3
34 AT1G74800 Galactosyltransferase family protein 0.77 0.33 -0.31
35 AT2G20710 Tetratricopeptide repeat (TPR)-like superfamily protein 0.77 0.32 -0.32
36 AT1G45150 unknown protein; Has 219 Blast hits to 202 proteins in 78
species: Archae - 0; Bacteria - 166; Metazoa - 0; Fungi -
0; Plants - 36; Viruses - 0; Other Eukaryotes - 17 (source:
NCBI BLink).		 -0.77 0.32 -0.32
37 AT1G26540 Agenet domain-containing protein 0.77 0.31 -0.34
38 AT2G43400 electron-transfer flavoprotein:ubiquinone oxidoreductase electron-transfer
flavoprotein:ubiquinone
oxidoreductase		 -0.77 0.31 -0.31
39 AT3G44100 MD-2-related lipid recognition domain-containing protein -0.76 0.3 -0.29
40 AT2G22690 zinc ion binding -0.76 0.3 -0.33
41 AT3G04670 WRKY DNA-binding protein 39 WRKY DNA-BINDING PROTEIN 39, WRKY
DNA-binding protein 39		 -0.76 0.35 -0.31
42 AT5G41670 6-phosphogluconate dehydrogenase family protein 0.76 0.31 -0.31
43 AT3G06780 glycine-rich protein -0.76 0.31 -0.32
44 AT3G51730 saposin B domain-containing protein -0.76 0.33 -0.3
45 AT4G24400 CBL-interacting protein kinase 8 ATCIPK8, CBL-interacting protein
kinase 8, PROTEIN KINASE 11,
SNF1-RELATED PROTEIN KINASE 3.13		 -0.76 0.34 -0.32
46 AT3G51130 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0183
(InterPro:IPR005373); Has 269 Blast hits to 265 proteins in
123 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi
- 82; Plants - 37; Viruses - 0; Other Eukaryotes - 19
(source: NCBI BLink).		 -0.76 0.32 -0.33
47 AT2G02710 PAS/LOV protein B PAS/LOV PROTEIN, PAS/LOV PROTEIN
A, PAS/LOV protein B, PAS/LOV
PROTEIN C		 -0.76 0.32 -0.32
48 AT1G06570 phytoene desaturation 1 4-hydroxyphenylpyruvate
dioxygenase,
4-hydroxyphenylpyruvate
dioxygenase, phytoene desaturation
1		 -0.76 0.31 -0.32
49 AT4G02680 ETO1-like 1 ETO1-like 1 0.76 0.29 -0.3
50 AT3G58170 BET1P/SFT1P-like protein 14A ATBET11, ARABIDOPSIS THALIANA
BET1P/SFT1P-LIKE PROTEIN 14A,
BET11, BET1P/SFT1P-like protein
14A		 -0.76 0.31 -0.29
51 AT3G20240 Mitochondrial substrate carrier family protein 0.76 0.32 -0.32
52 AT1G76150 enoyl-CoA hydratase 2 ATECH2, enoyl-CoA hydratase 2 -0.76 0.31 -0.34
53 AT1G71460 Pentatricopeptide repeat (PPR-like) superfamily protein 0.76 0.3 -0.32
54 AT5G58740 HSP20-like chaperones superfamily protein -0.76 0.3 -0.3
55 AT5G06370 NC domain-containing protein-related -0.76 0.3 -0.31
56 AT1G63810 CONTAINS InterPro DOMAIN/s: Nrap protein
(InterPro:IPR005554); Has 396 Blast hits to 382 proteins in
182 species: Archae - 3; Bacteria - 2; Metazoa - 142; Fungi
- 146; Plants - 43; Viruses - 0; Other Eukaryotes - 60
(source: NCBI BLink).		 0.75 0.32 -0.3
57 AT3G59670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G37440.2); Has 77 Blast hits
to 77 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 0.75 0.32 -0.31
58 AT3G12520 sulfate transporter 4;2 sulfate transporter 4;2 -0.75 0.32 -0.3
59 AT5G03490 UDP-Glycosyltransferase superfamily protein -0.75 0.33 -0.31
60 AT1G02305 Cysteine proteinases superfamily protein -0.75 0.33 -0.33
61 AT5G13800 pheophytinase Co-regulated with NYE1,
pheophytinase		 -0.75 0.34 -0.32
62 AT1G47128 Granulin repeat cysteine protease family protein responsive to dehydration 21,
RESPONSIVE TO DEHYDRATION 21A		 -0.75 0.31 -0.31
63 AT4G36040 Chaperone DnaJ-domain superfamily protein DnaJ11 -0.75 0.33 -0.3
64 AT3G44850 Protein kinase superfamily protein 0.75 0.3 -0.33
65 AT2G04280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G12700.1); Has 130 Blast hits to 130 proteins in
16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.75 0.31 -0.31
66 AT3G01160 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cytosol, nucleus;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: NUC153
(InterPro:IPR012580); Has 36638 Blast hits to 21323
proteins in 1057 species: Archae - 109; Bacteria - 2369;
Metazoa - 13796; Fungi - 4858; Plants - 1657; Viruses -
489; Other Eukaryotes - 13360 (source: NCBI BLink).		 0.75 0.35 -0.32
67 AT1G33490 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2062 (InterPro:IPR018639); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G10140.1); Has 88 Blast hits to 88 proteins in 29
species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0;
Plants - 54; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 -0.75 0.31 -0.31
68 AT2G41940 zinc finger protein 8 zinc finger protein 8 0.75 0.31 -0.3
69 AT2G38090 Duplicated homeodomain-like superfamily protein 0.75 0.31 -0.3
70 AT5G57120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: nucleolus;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: LisH
dimerisation motif (InterPro:IPR006594), SRP40, C-terminal
(InterPro:IPR007718); Has 101969 Blast hits to 55488
proteins in 2506 species: Archae - 424; Bacteria - 13843;
Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses -
569; Other Eukaryotes - 34792 (source: NCBI BLink).		 0.75 0.29 -0.33
71 AT4G30890 ubiquitin-specific protease 24 ubiquitin-specific protease 24 0.75 0.31 -0.35
72 AT4G38050 Xanthine/uracil permease family protein 0.75 0.31 -0.32
73 AT1G12050 fumarylacetoacetase, putative -0.74 0.31 -0.32
74 AT3G60140 Glycosyl hydrolase superfamily protein BETA GLUCOSIDASE 30, DARK
INDUCIBLE 2, SENESCENCE-RELATED
GENE 2		 -0.74 0.31 -0.31
75 AT1G62040 Ubiquitin-like superfamily protein autophagy 8c -0.74 0.33 -0.31
76 AT1G63660 GMP synthase (glutamine-hydrolyzing), putative / glutamine
amidotransferase, putative		 0.74 0.29 -0.34
77 AT3G23490 cyanase cyanase -0.74 0.3 -0.31
78 AT3G04470 Ankyrin repeat family protein 0.74 0.32 -0.31
79 AT1G45976 S-ribonuclease binding protein 1 S-ribonuclease binding protein 1 -0.74 0.31 -0.31
80 AT4G02510 translocon at the outer envelope membrane of chloroplasts
159		 ATTOC159, PLASTID PROTEIN IMPORT
2, translocon at the outer
envelope membrane of chloroplasts
159, TRANSLOCON AT THE OUTER
ENVELOPE MEMBRANE OF CHLOROPLASTS
160, TRANSLOCON AT THE OUTER
ENVELOPE MEMBRANE OF CHLOROPLASTS
86		 0.74 0.3 -0.31
81 AT4G38810 Calcium-binding EF-hand family protein -0.74 0.34 -0.32
82 AT5G43430 electron transfer flavoprotein beta electron transfer flavoprotein
beta		 -0.74 0.33 -0.3
83 AT3G51840 acyl-CoA oxidase 4 acyl-CoA oxidase 4, ATG6, ATSCX -0.74 0.32 -0.31
84 AT1G53560 Ribosomal protein L18ae family -0.74 0.28 -0.31
85 AT1G52530 CONTAINS InterPro DOMAIN/s: Hus1-like protein
(InterPro:IPR007150); Has 129 Blast hits to 128 proteins in
49 species: Archae - 0; Bacteria - 0; Metazoa - 57; Fungi -
10; Plants - 47; Viruses - 0; Other Eukaryotes - 15
(source: NCBI BLink).		 0.74 0.33 -0.32
86 AT1G62422 unknown protein; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G12020.1); Has 87 Blast hits to 86 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.73 0.29 -0.32
87 AT5G56040 Leucine-rich receptor-like protein kinase family protein 0.73 0.33 -0.33
88 AT1G73500 MAP kinase kinase 9 ATMKK9, MAP kinase kinase 9 -0.73 0.31 -0.3
89 AT4G29160 SNF7 family protein SNF7.1 -0.73 0.34 -0.32
90 AT1G31170 sulfiredoxin SULFIREDOXIN, sulfiredoxin -0.73 0.31 -0.3
91 AT5G16120 alpha/beta-Hydrolases superfamily protein -0.73 0.32 -0.31
92 AT1G06800 alpha/beta-Hydrolases superfamily protein phospholipase A I gamma 1 -0.73 0.32 -0.32
93 AT2G16400 BEL1-like homeodomain 7 BEL1-like homeodomain 7 0.73 0.31 -0.29
94 AT3G11100 sequence-specific DNA binding transcription factors -0.73 0.34 -0.31
95 AT1G59700 glutathione S-transferase TAU 16 glutathione S-transferase TAU 16,
glutathione S-transferase TAU 16		 -0.73 0.35 -0.32
96 AT2G05630 Ubiquitin-like superfamily protein ATG8D -0.73 0.32 -0.32
97 AT1G47960 cell wall / vacuolar inhibitor of fructosidase 1 CELL WALL / VACUOLAR INHIBITOR OF
FRUCTOSIDASE 1, cell wall /
vacuolar inhibitor of fructosidase
1		 -0.73 0.29 -0.34
98 AT1G05840 Eukaryotic aspartyl protease family protein -0.73 0.32 -0.3
99 AT3G47960 Major facilitator superfamily protein -0.73 0.33 -0.32
100 AT1G68130 indeterminate(ID)-domain 14 indeterminate(ID)-domain 14,
indeterminate(ID)-domain 14,
IDD14alpha, IDD14beta		 0.73 0.31 -0.33
101 AT3G48690 alpha/beta-Hydrolases superfamily protein ARABIDOPSIS THALIANA
CARBOXYESTERASE 12, CXE12		 -0.73 0.34 -0.31
102 AT3G10690 DNA GYRASE A DNA GYRASE A 0.73 0.33 -0.28
103 AT1G23960 Protein of unknown function (DUF626) -0.73 0.31 -0.3
104 AT3G46110 Domain of unknown function (DUF966) -0.73 0.31 -0.3
105 AT5G47455 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED
DURING: 8 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G17310.1); Has 147 Blast
hits to 147 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 147; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.72 0.34 -0.32
106 AT3G11880 Protein of unknown function DUF2359, transmembrane -0.72 0.31 -0.3
107 AT1G08840 DNA replication helicase, putative embryo defective 2411 0.72 0.33 -0.31
108 AT4G33940 RING/U-box superfamily protein -0.72 0.3 -0.31
109 AT3G51320 Pentatricopeptide repeat (PPR) superfamily protein 0.72 0.3 -0.31
110 AT5G24420 6-phosphogluconolactonase 5 6-phosphogluconolactonase 5 -0.72 0.34 -0.3
111 AT5G61990 Pentatricopeptide repeat (PPR) superfamily protein 0.72 0.29 -0.31
112 AT3G54380 SAC3/GANP/Nin1/mts3/eIF-3 p25 family AtSAC3C, yeast Sac3 homolog C -0.72 0.32 -0.34
113 AT2G01900 DNAse I-like superfamily protein 0.72 0.3 -0.32
114 AT1G73020 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF590 (InterPro:IPR007632); Has 1198
Blast hits to 1128 proteins in 154 species: Archae - 0;
Bacteria - 0; Metazoa - 809; Fungi - 158; Plants - 25;
Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink).		 0.72 0.32 -0.31
115 AT1G48440 B-cell receptor-associated 31-like -0.72 0.32 -0.33
116 AT5G39960 GTP binding;GTP binding 0.72 0.32 -0.31
117 AT5G39840 ATP-dependent RNA helicase, mitochondrial, putative 0.72 0.32 -0.31
118 AT1G27880 DEAD/DEAH box RNA helicase family protein 0.72 0.32 -0.35
119 AT5G58370 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.72 0.31 -0.31
120 AT3G27640 Transducin/WD40 repeat-like superfamily protein 0.72 0.32 -0.33
121 AT4G05530 indole-3-butyric acid response 1 indole-3-butyric acid response 1,
SHORT-CHAIN
DEHYDROGENASE/REDUCTASE A		 -0.71 0.33 -0.31
122 AT1G19310 RING/U-box superfamily protein -0.71 0.31 -0.31
123 AT1G61065 Protein of unknown function (DUF1218) -0.71 0.33 -0.33
124 AT5G05230 RING/U-box superfamily protein -0.71 0.33 -0.33
125 AT1G55920 serine acetyltransferase 2;1 serine acetyltransferase 2;1,
SERINE ACETYLTRANSFERASE 1, SERINE
ACETYLTRANSFERASE 5, serine
acetyltransferase 2;1		 -0.71 0.3 -0.3
126 AT4G30550 Class I glutamine amidotransferase-like superfamily protein gamma-glutamyl peptidase 3 -0.71 0.32 -0.31
127 AT1G04960 Protein of unknown function (DUF1664) -0.71 0.33 -0.31
128 AT5G56180 actin-related protein 8 ARP8, actin-related protein 8,
actin-related protein 8		 -0.71 0.3 -0.33
129 AT4G21470 riboflavin kinase/FMN hydrolase riboflavin kinase/FMN hydrolase,
riboflavin kinase/FMN hydrolase		 -0.71 0.32 -0.29
130 AT1G27530 CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating
enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-fold
modifier-conjugating enzyme 1 (InterPro:IPR014806); Has 269
Blast hits to 269 proteins in 110 species: Archae - 0;
Bacteria - 0; Metazoa - 175; Fungi - 0; Plants - 42;
Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).		 -0.71 0.31 -0.3
131 AT2G24040 Low temperature and salt responsive protein family -0.71 0.31 -0.32
132 AT4G29490 Metallopeptidase M24 family protein -0.71 0.3 -0.31
133 AT2G33150 peroxisomal 3-ketoacyl-CoA thiolase 3 3-KETOACYL-COA THIOLASE 2,
PEROXISOME DEFECTIVE 1,
peroxisomal 3-ketoacyl-CoA
thiolase 3		 -0.71 0.31 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
134 C0217 Putative glucosinole - - - 0.87 0.41 -0.44