AT4G30090 : -
Query Information
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AGICode AT4G30090
Description embryo defective 1353
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G30090 embryo defective 1353 1 0.3 -0.31
2 AT1G32020 F-box family protein 0.63 0.3 -0.31
3 AT1G10000 Ribonuclease H-like superfamily protein -0.62 0.28 -0.32
4 AT3G42880 Leucine-rich repeat protein kinase family protein -0.61 0.31 -0.33
5 AT4G22100 beta glucosidase 2 beta glucosidase 2 -0.6 0.33 -0.33
6 AT4G34840 Phosphorylase superfamily protein ARABIDOPSIS METHYLTHIOADENOSINE
NUCLEOSIDASE 2, ARABIDOPSIS
METHYLTHIOADENOSINE NUCLEOSIDASE
2, METHYLTHIOADENOSINE
NUCLEOSIDASE 2,
methylthioadenosine nucleosidase 2		 0.59 0.34 -0.3
7 AT1G73000 PYR1-like 3 PYR1-like 3, regulatory components
of ABA receptor 13		 0.59 0.35 -0.32
8 AT5G20770 transposable element gene -0.58 0.32 -0.32
9 AT5G33240 transposable element gene 0.58 0.33 -0.31
10 AT1G04660 glycine-rich protein -0.58 0.33 -0.31
11 AT3G22500 Seed maturation protein LATE EMBRYOGENESIS ABUNDANT
PROTEIN ECP31		 -0.57 0.31 -0.32
12 AT4G26740 seed gene 1 ARABIDOPSIS THALIANA PEROXYGENASE
1, seed gene 1, CALEOSIN1		 -0.57 0.31 -0.3
13 AT2G42000 Plant EC metallothionein-like protein, family 15 Arabidopsis thaliana
metallothionein 4a		 -0.57 0.32 -0.28
14 AT5G43360 phosphate transporter 1;3 ATPT4, phosphate transporter 1;3,
PHOSPHATE TRANSPORTER 3		 0.57 0.32 -0.3
15 AT3G51810 Stress induced protein AT3, ARABIDOPSIS THALIANA LATE
EMBRYOGENESIS ABUNDANT 1, LATE
EMBRYOGENESIS ABUNDANT 1, GUANINE
NUCLEOTIDE EXCHANGE FACTOR FOR ADP
RIBOSYLATION FACTORS 1		 -0.57 0.29 -0.3
16 AT2G47280 Pectin lyase-like superfamily protein 0.56 0.33 -0.32
17 AT1G67780 Zinc-finger domain of monoamine-oxidase A repressor R1
protein		 0.55 0.31 -0.32
18 AT2G26460 RED family protein SUPPRESSORS OF MEC-8 AND UNC-52 2 0.55 0.33 -0.31
19 AT5G53840 F-box/RNI-like/FBD-like domains-containing protein 0.55 0.29 -0.3
20 AT5G17800 myb domain protein 56 myb domain protein 56, myb domain
protein 56		 0.55 0.34 -0.35
21 AT1G27720 TBP-associated factor 4B TBP-associated factor 4,
TBP-associated factor 4B		 0.54 0.31 -0.32
22 AT4G15040 Subtilisin-like serine endopeptidase family protein -0.54 0.32 -0.33
23 AT3G11110 RING/U-box superfamily protein 0.54 0.31 -0.31
24 AT3G42400 transposable element gene 0.53 0.31 -0.3
25 AT2G23240 Plant EC metallothionein-like protein, family 15 Arabidopsis thaliana
metallothionein 4b		 -0.53 0.3 -0.28
26 AT5G66010 RNA-binding (RRM/RBD/RNP motifs) family protein 0.52 0.3 -0.32
27 AT5G09500 Ribosomal protein S19 family protein -0.52 0.32 -0.33
28 AT2G02140 low-molecular-weight cysteine-rich 72 low-molecular-weight cysteine-rich
72, PDF2.6		 -0.52 0.32 -0.34
29 AT4G25510 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.52 0.31 -0.33
30 AT3G14470 NB-ARC domain-containing disease resistance protein 0.51 0.3 -0.33
31 AT5G11300 mitotic-like cyclin 3B from Arabidopsis CYC2BAT, mitotic-like cyclin 3B
from Arabidopsis, CYCLIN A2;2		 0.51 0.33 -0.31
32 AT4G14385 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: vacuole; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 15 growth
stages; CONTAINS InterPro DOMAIN/s: Histone H4
acetyltransferase, NuA4 complex, Eaf6 (InterPro:IPR015418);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.51 0.31 -0.32
33 AT1G67450 F-box and associated interaction domains-containing protein -0.51 0.3 -0.32
34 AT3G28670 oxidoreductase, zinc-binding dehydrogenase family protein -0.5 0.28 -0.29
35 AT3G23020 Tetratricopeptide repeat (TPR)-like superfamily protein -0.5 0.32 -0.31
36 AT2G01100 unknown protein; Has 19420 Blast hits to 10641 proteins in
779 species: Archae - 0; Bacteria - 1003; Metazoa - 10257;
Fungi - 1826; Plants - 1570; Viruses - 56; Other Eukaryotes
- 4708 (source: NCBI BLink).		 0.5 0.3 -0.34
37 AT4G25530 FLOWERING WAGENINGEN FLOWERING WAGENINGEN, HOMEODOMAIN
GLABROUS 6		 -0.5 0.3 -0.31
38 AT3G09180 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med27
(InterPro:IPR021627); Has 112 Blast hits to 112 proteins in
38 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi -
0; Plants - 23; Viruses - 0; Other Eukaryotes - 10 (source:
NCBI BLink).		 0.5 0.34 -0.31
39 AT1G34150 Pseudouridine synthase family protein 0.49 0.32 -0.32
40 AT3G45950 Pre-mRNA splicing Prp18-interacting factor 0.49 0.32 -0.32
41 AT3G42590 transposable element gene 0.49 0.3 -0.31
42 AT1G47540 Scorpion toxin-like knottin superfamily protein 0.49 0.32 -0.32
43 AT1G22600 Late embryogenesis abundant protein (LEA) family protein -0.49 0.33 -0.31
44 AT5G49180 Plant invertase/pectin methylesterase inhibitor superfamily 0.48 0.32 -0.33
45 AT2G06140 transposable element gene 0.48 0.31 -0.32
46 AT4G03290 EF hand calcium-binding protein family 0.48 0.33 -0.3
47 AT2G07300 transposable element gene 0.47 0.33 -0.31
48 AT5G29090 transposable element gene 0.47 0.33 -0.33
49 AT3G07970 Pectin lyase-like superfamily protein QUARTET 2 0.47 0.31 -0.3
50 AT1G53420 Leucine-rich repeat transmembrane protein kinase 0.47 0.31 -0.3
51 AT4G27160 seed storage albumin 3 AT2S3, seed storage albumin 3 -0.47 0.29 -0.31
52 AT2G19320 unknown protein; Has 9 Blast hits to 9 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.47 0.31 -0.31
53 AT1G54550 F-box and associated interaction domains-containing protein 0.47 0.3 -0.31
54 AT4G16270 Peroxidase superfamily protein 0.47 0.32 -0.3
55 AT1G43650 nodulin MtN21 /EamA-like transporter family protein -0.46 0.32 -0.31
56 AT5G67110 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 ALCATRAZ 0.46 0.32 -0.31
57 AT3G26040 HXXXD-type acyl-transferase family protein -0.46 0.32 -0.31
58 AT1G12520 copper chaperone for SOD1 copper chaperone for SOD1, copper
chaperone for SOD1		 0.46 0.31 -0.31
59 AT2G43590 Chitinase family protein 0.45 0.31 -0.3
60 AT4G31450 RING/U-box superfamily protein 0.45 0.32 -0.32
61 AT4G07720 pseudogene, hypothetical protein -0.45 0.31 -0.31
62 AT1G60180 pseudogene of F-box family protein -0.45 0.31 -0.3
63 AT4G07500 transposable element gene -0.44 0.33 -0.33
64 AT1G35612 transposable element gene 0.44 0.31 -0.33
65 AT5G62160 zinc transporter 12 precursor zinc transporter 12 precursor,
zinc transporter 12 precursor		 -0.44 0.33 -0.33
66 AT5G29030 pseudogene, hypothetical protein -0.44 0.32 -0.32
67 AT3G27120 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.44 0.33 -0.33
68 AT1G12490 F-box associated ubiquitination effector family protein -0.43 0.32 -0.32
69 AT1G61550 S-locus lectin protein kinase family protein 0.43 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
70 C0199 Phosphatidylethanolamine-36:6 - Phosphatidylethanolamine-36:6 phospholipid biosynthesis II,
linoleate biosynthesis I,
phosphatidylethanolamine biosynthesis I,
phosphatidylethanolamine biosynthesis II,
glutathione redox reactions I 		-0.68 0.49 -0.52 C0199