AGICode | AT4G30160 |
Description | villin 4 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G30160 | villin 4 | ATVLN4, villin 4 | 1 | 0.32 | -0.31 | ||
2 | AT2G30010 | TRICHOME BIREFRINGENCE-LIKE 45 | TRICHOME BIREFRINGENCE-LIKE 45 | 0.75 | 0.31 | -0.33 | ||
3 | AT4G22910 | FIZZY-related 2 | cell cycle switch protein 52 A1, FIZZY-related 2 |
0.72 | 0.32 | -0.34 | ||
4 | AT3G46820 | type one serine/threonine protein phosphatase 5 | type one serine/threonine protein phosphatase 5 |
0.72 | 0.32 | -0.29 | ||
5 | AT4G34860 | Plant neutral invertase family protein | alkaline/neutral invertase B | -0.71 | 0.31 | -0.34 | ||
6 | AT1G65920 | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain |
-0.71 | 0.31 | -0.32 | |||
7 | AT1G32560 | Late embryogenesis abundant protein, group 1 protein | Late Embryogenesis Abundant 4-1, Late Embryogenesis Abundant 4-1 |
-0.71 | 0.33 | -0.31 | ||
8 | AT5G61060 | histone deacetylase 5 | ATHDA5, histone deacetylase 5, HDA5 |
-0.7 | 0.3 | -0.31 | ||
9 | AT2G01260 | Protein of unknown function (DUF789) | 0.7 | 0.32 | -0.34 | |||
10 | AT3G01120 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
AtCGS1, A. thaliana cystathionine gamma-synthetase 1, CYSTATHIONINE GAMMA-SYNTHASE, CYSTATHIONINE GAMMA-SYNTHASE 1, METHIONINE OVERACCUMULATION 1 |
0.69 | 0.3 | -0.31 | ||
11 | AT1G64110 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
DUO1-activated ATPase 1 | -0.68 | 0.31 | -0.3 | ||
12 | AT5G32450 | RNA binding (RRM/RBD/RNP motifs) family protein | 0.68 | 0.31 | -0.33 | |||
13 | AT1G28330 | dormancy-associated protein-like 1 | DORMANCY-ASSOCIATED PROTEIN 1, dormancy-associated protein-like 1 |
-0.68 | 0.32 | -0.3 | ||
14 | AT1G52690 | Late embryogenesis abundant protein (LEA) family protein | LATE EMBRYOGENESIS ABUNDANT 7 | -0.67 | 0.31 | -0.34 | ||
15 | AT1G25530 | Transmembrane amino acid transporter family protein | -0.67 | 0.31 | -0.31 | |||
16 | AT3G19100 | Protein kinase superfamily protein | -0.67 | 0.31 | -0.32 | |||
17 | AT2G27360 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.67 | 0.31 | -0.32 | |||
18 | AT3G61130 | galacturonosyltransferase 1 | galacturonosyltransferase 1, LGT1 | 0.67 | 0.31 | -0.32 | ||
19 | AT5G28230 | pseudogene, similar to glucose-6-phosphate/phosphate-translocator precursor, contains similarity to glucose-6-phosphate/phosphate-translocator precursors; blastp match of 78% identity and 1.6e-75 P-value to GP|2997591|gb|AAC08525.1||AF020814 glucose-6-phosphate/phosphate-translocator precursor {Pisum sativum} |
0.67 | 0.31 | -0.29 | |||
20 | AT5G40980 | Protein of unknown function (DUF 3339) | 0.66 | 0.3 | -0.31 | |||
21 | AT5G59320 | lipid transfer protein 3 | lipid transfer protein 3 | -0.66 | 0.3 | -0.3 | ||
22 | AT2G05755 | Nodulin MtN21 /EamA-like transporter family protein | 0.66 | 0.3 | -0.31 | |||
23 | AT5G13710 | sterol methyltransferase 1 | CEPHALOPOD, sterol methyltransferase 1 |
0.65 | 0.35 | -0.29 | ||
24 | AT4G39740 | Thioredoxin superfamily protein | homologue of copper chaperone SCO1 2 |
0.65 | 0.32 | -0.31 | ||
25 | AT3G24310 | myb domain protein 305 | MYB DOMAIN PROTEIN 71, myb domain protein 305 |
-0.65 | 0.32 | -0.32 | ||
26 | AT3G01860 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 66 Blast hits to 66 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.65 | 0.32 | -0.3 | |||
27 | AT3G18060 | transducin family protein / WD-40 repeat family protein | 0.65 | 0.31 | -0.32 | |||
28 | AT1G55740 | seed imbibition 1 | seed imbibition 1, raffinose synthase 1, seed imbibition 1 |
-0.65 | 0.32 | -0.33 | ||
29 | AT5G20790 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.64 | 0.3 | -0.31 | |||
30 | AT4G08840 | pumilio 11 | pumilio 11, pumilio 11 | 0.64 | 0.34 | -0.31 | ||
31 | AT4G37380 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.64 | 0.32 | -0.32 | |||
32 | AT3G16850 | Pectin lyase-like superfamily protein | 0.64 | 0.32 | -0.31 | |||
33 | AT3G03170 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24890.1); Has 184 Blast hits to 184 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.64 | 0.31 | -0.33 | |||
34 | AT1G69270 | receptor-like protein kinase 1 | receptor-like protein kinase 1 | -0.64 | 0.32 | -0.34 | ||
35 | AT3G19290 | ABRE binding factor 4 | ABRE binding factor 4, ABA-RESPONSIVE ELEMENT BINDING PROTEIN 2 |
-0.64 | 0.31 | -0.31 | ||
36 | AT1G58440 | FAD/NAD(P)-binding oxidoreductase family protein | SQUALENE EPOXIDASE 1, XF1 | 0.63 | 0.33 | -0.32 | ||
37 | AT5G40450 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.63 | 0.3 | -0.31 | |||
38 | AT1G66830 | Leucine-rich repeat protein kinase family protein | -0.63 | 0.31 | -0.3 | |||
39 | AT1G12530 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56420.1); Has 54 Blast hits to 53 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.63 | 0.31 | -0.32 | |||
40 | AT2G38370 | Plant protein of unknown function (DUF827) | -0.62 | 0.32 | -0.27 | |||
41 | AT4G34265 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G15000.3); Has 76 Blast hits to 76 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.62 | 0.3 | -0.32 | |||
42 | AT1G20160 | Subtilisin-like serine endopeptidase family protein | ATSBT5.2 | -0.62 | 0.31 | -0.33 | ||
43 | AT1G13580 | LAG1 longevity assurance homolog 3 | LAG1 longevity assurance homolog 3, LAG One Homologue 3 |
0.62 | 0.34 | -0.33 | ||
44 | AT4G16990 | disease resistance protein (TIR-NBS class), putative | RESISTANCE TO LEPTOSPHAERIA MACULANS 3 |
0.62 | 0.29 | -0.33 | ||
45 | AT1G19850 | Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related |
AUXIN RESPONSE FACTOR 5, indole-3-acetic acid inducible 24, MONOPTEROS |
-0.62 | 0.3 | -0.31 | ||
46 | AT3G11700 | FASCICLIN-like arabinogalactan protein 18 precursor | FASCICLIN-like arabinogalactan protein 18 precursor |
0.62 | 0.33 | -0.31 | ||
47 | AT1G65620 | Lateral organ boundaries (LOB) domain family protein | ASYMMETRIC LEAVES 2 | 0.61 | 0.31 | -0.31 | ||
48 | AT5G47940 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.61 | 0.29 | -0.33 | |||
49 | AT3G23300 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.61 | 0.3 | -0.31 | |||
50 | AT4G37820 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G22795.1); Has 433572 Blast hits to 177005 proteins in 4263 species: Archae - 2016; Bacteria - 67591; Metazoa - 157995; Fungi - 49745; Plants - 22011; Viruses - 2192; Other Eukaryotes - 132022 (source: NCBI BLink). |
0.61 | 0.3 | -0.33 | |||
51 | AT1G33050 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10470.1); Has 531 Blast hits to 229 proteins in 83 species: Archae - 0; Bacteria - 197; Metazoa - 59; Fungi - 50; Plants - 48; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). |
-0.61 | 0.33 | -0.31 | |||
52 | AT1G15410 | aspartate-glutamate racemase family | 0.61 | 0.33 | -0.27 | |||
53 | AT3G62130 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
L-cysteine desulfhydrase | -0.61 | 0.3 | -0.3 | ||
54 | AT2G34650 | Protein kinase superfamily protein | ABRUPTUS, PINOID | -0.6 | 0.32 | -0.32 | ||
55 | AT4G33530 | K+ uptake permease 5 | K+ uptake permease 5 | 0.6 | 0.34 | -0.31 | ||
56 | AT1G50890 | ARM repeat superfamily protein | 0.6 | 0.32 | -0.3 | |||
57 | AT5G14760 | L-aspartate oxidase | L-aspartate oxidase | 0.59 | 0.33 | -0.3 | ||
58 | AT4G21440 | MYB-like 102 | A. THALIANA MYB 4, MYB-like 102, MYB102, MYB-like 102 |
-0.59 | 0.32 | -0.31 | ||
59 | AT5G24610 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.59 | 0.33 | -0.32 | |||
60 | AT1G50700 | calcium-dependent protein kinase 33 | calcium-dependent protein kinase 33 |
-0.58 | 0.33 | -0.3 | ||
61 | AT3G22440 | FRIGIDA-like protein | -0.58 | 0.33 | -0.3 | |||
62 | AT3G53040 | late embryogenesis abundant protein, putative / LEA protein, putative |
-0.57 | 0.31 | -0.33 | |||
63 | AT4G38210 | expansin A20 | ATEXP20, expansin A20, ATHEXP ALPHA 1.23, EXPANSIN 20, expansin A20 |
-0.57 | 0.33 | -0.31 | ||
64 | AT1G16310 | Cation efflux family protein | -0.56 | 0.33 | -0.31 | |||
65 | AT3G21090 | ABC-2 type transporter family protein | ATP-binding cassette G15 | -0.56 | 0.32 | -0.32 | ||
66 | AT1G79360 | organic cation/carnitine transporter 2 | organic cation/carnitine transporter 2, ORGANIC CATION TRANSPORTER 2, organic cation/carnitine transporter 2 |
-0.56 | 0.31 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
67 | C0017 | sn-Glycero-3-phosphocholine | sn-Glycero-3-phosphocholine | L-1-Glycero-3-phosphocholine | - | -0.8 | 0.43 | -0.44 | ||
68 | C0146 | Mannitol | D-Mannitol | Mannitol | mannitol degradation II | -0.67 | 0.47 | -0.45 |