AT4G30160 : ATVLN4
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G30160
Description villin 4
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G30160 villin 4 ATVLN4, villin 4 1 0.32 -0.31
2 AT2G30010 TRICHOME BIREFRINGENCE-LIKE 45 TRICHOME BIREFRINGENCE-LIKE 45 0.75 0.31 -0.33
3 AT4G22910 FIZZY-related 2 cell cycle switch protein 52 A1,
FIZZY-related 2		 0.72 0.32 -0.34
4 AT3G46820 type one serine/threonine protein phosphatase 5 type one serine/threonine protein
phosphatase 5		 0.72 0.32 -0.29
5 AT4G34860 Plant neutral invertase family protein alkaline/neutral invertase B -0.71 0.31 -0.34
6 AT1G65920 Regulator of chromosome condensation (RCC1) family with
FYVE zinc finger domain		 -0.71 0.31 -0.32
7 AT1G32560 Late embryogenesis abundant protein, group 1 protein Late Embryogenesis Abundant 4-1,
Late Embryogenesis Abundant 4-1		 -0.71 0.33 -0.31
8 AT5G61060 histone deacetylase 5 ATHDA5, histone deacetylase 5,
HDA5		 -0.7 0.3 -0.31
9 AT2G01260 Protein of unknown function (DUF789) 0.7 0.32 -0.34
10 AT3G01120 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 AtCGS1, A. thaliana cystathionine
gamma-synthetase 1, CYSTATHIONINE
GAMMA-SYNTHASE, CYSTATHIONINE
GAMMA-SYNTHASE 1, METHIONINE
OVERACCUMULATION 1		 0.69 0.3 -0.31
11 AT1G64110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 DUO1-activated ATPase 1 -0.68 0.31 -0.3
12 AT5G32450 RNA binding (RRM/RBD/RNP motifs) family protein 0.68 0.31 -0.33
13 AT1G28330 dormancy-associated protein-like 1 DORMANCY-ASSOCIATED PROTEIN 1,
dormancy-associated protein-like 1		 -0.68 0.32 -0.3
14 AT1G52690 Late embryogenesis abundant protein (LEA) family protein LATE EMBRYOGENESIS ABUNDANT 7 -0.67 0.31 -0.34
15 AT1G25530 Transmembrane amino acid transporter family protein -0.67 0.31 -0.31
16 AT3G19100 Protein kinase superfamily protein -0.67 0.31 -0.32
17 AT2G27360 GDSL-like Lipase/Acylhydrolase superfamily protein 0.67 0.31 -0.32
18 AT3G61130 galacturonosyltransferase 1 galacturonosyltransferase 1, LGT1 0.67 0.31 -0.32
19 AT5G28230 pseudogene, similar to
glucose-6-phosphate/phosphate-translocator precursor,
contains similarity to
glucose-6-phosphate/phosphate-translocator precursors;
blastp match of 78% identity and 1.6e-75 P-value to
GP|2997591|gb|AAC08525.1||AF020814
glucose-6-phosphate/phosphate-translocator precursor {Pisum
sativum}		 0.67 0.31 -0.29
20 AT5G40980 Protein of unknown function (DUF 3339) 0.66 0.3 -0.31
21 AT5G59320 lipid transfer protein 3 lipid transfer protein 3 -0.66 0.3 -0.3
22 AT2G05755 Nodulin MtN21 /EamA-like transporter family protein 0.66 0.3 -0.31
23 AT5G13710 sterol methyltransferase 1 CEPHALOPOD, sterol
methyltransferase 1		 0.65 0.35 -0.29
24 AT4G39740 Thioredoxin superfamily protein homologue of copper chaperone SCO1
2		 0.65 0.32 -0.31
25 AT3G24310 myb domain protein 305 MYB DOMAIN PROTEIN 71, myb domain
protein 305		 -0.65 0.32 -0.32
26 AT3G01860 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to cadmium ion; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G27210.1); Has 66 Blast
hits to 66 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 5; Fungi - 0; Plants - 61; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.32 -0.3
27 AT3G18060 transducin family protein / WD-40 repeat family protein 0.65 0.31 -0.32
28 AT1G55740 seed imbibition 1 seed imbibition 1, raffinose
synthase 1, seed imbibition 1		 -0.65 0.32 -0.33
29 AT5G20790 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis,
petal differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G43110.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.64 0.3 -0.31
30 AT4G08840 pumilio 11 pumilio 11, pumilio 11 0.64 0.34 -0.31
31 AT4G37380 Tetratricopeptide repeat (TPR)-like superfamily protein 0.64 0.32 -0.32
32 AT3G16850 Pectin lyase-like superfamily protein 0.64 0.32 -0.31
33 AT3G03170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G24890.1); Has 184 Blast hits
to 184 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.31 -0.33
34 AT1G69270 receptor-like protein kinase 1 receptor-like protein kinase 1 -0.64 0.32 -0.34
35 AT3G19290 ABRE binding factor 4 ABRE binding factor 4,
ABA-RESPONSIVE ELEMENT BINDING
PROTEIN 2		 -0.64 0.31 -0.31
36 AT1G58440 FAD/NAD(P)-binding oxidoreductase family protein SQUALENE EPOXIDASE 1, XF1 0.63 0.33 -0.32
37 AT5G40450 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plasma membrane; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.63 0.3 -0.31
38 AT1G66830 Leucine-rich repeat protein kinase family protein -0.63 0.31 -0.3
39 AT1G12530 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G56420.1); Has 54 Blast hits
to 53 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.31 -0.32
40 AT2G38370 Plant protein of unknown function (DUF827) -0.62 0.32 -0.27
41 AT4G34265 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G15000.3); Has 76 Blast
hits to 76 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.3 -0.32
42 AT1G20160 Subtilisin-like serine endopeptidase family protein ATSBT5.2 -0.62 0.31 -0.33
43 AT1G13580 LAG1 longevity assurance homolog 3 LAG1 longevity assurance homolog
3, LAG One Homologue 3		 0.62 0.34 -0.33
44 AT4G16990 disease resistance protein (TIR-NBS class), putative RESISTANCE TO LEPTOSPHAERIA
MACULANS 3		 0.62 0.29 -0.33
45 AT1G19850 Transcriptional factor B3 family protein / auxin-responsive
factor AUX/IAA-related		 AUXIN RESPONSE FACTOR 5,
indole-3-acetic acid inducible 24,
MONOPTEROS		 -0.62 0.3 -0.31
46 AT3G11700 FASCICLIN-like arabinogalactan protein 18 precursor FASCICLIN-like arabinogalactan
protein 18 precursor		 0.62 0.33 -0.31
47 AT1G65620 Lateral organ boundaries (LOB) domain family protein ASYMMETRIC LEAVES 2 0.61 0.31 -0.31
48 AT5G47940 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.61 0.29 -0.33
49 AT3G23300 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.61 0.3 -0.31
50 AT4G37820 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G22795.1); Has 433572 Blast
hits to 177005 proteins in 4263 species: Archae - 2016;
Bacteria - 67591; Metazoa - 157995; Fungi - 49745; Plants -
22011; Viruses - 2192; Other Eukaryotes - 132022 (source:
NCBI BLink).		 0.61 0.3 -0.33
51 AT1G33050 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G10470.1); Has 531 Blast hits to 229 proteins in
83 species: Archae - 0; Bacteria - 197; Metazoa - 59; Fungi
- 50; Plants - 48; Viruses - 0; Other Eukaryotes - 177
(source: NCBI BLink).		 -0.61 0.33 -0.31
52 AT1G15410 aspartate-glutamate racemase family 0.61 0.33 -0.27
53 AT3G62130 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 L-cysteine desulfhydrase -0.61 0.3 -0.3
54 AT2G34650 Protein kinase superfamily protein ABRUPTUS, PINOID -0.6 0.32 -0.32
55 AT4G33530 K+ uptake permease 5 K+ uptake permease 5 0.6 0.34 -0.31
56 AT1G50890 ARM repeat superfamily protein 0.6 0.32 -0.3
57 AT5G14760 L-aspartate oxidase L-aspartate oxidase 0.59 0.33 -0.3
58 AT4G21440 MYB-like 102 A. THALIANA MYB 4, MYB-like 102,
MYB102, MYB-like 102		 -0.59 0.32 -0.31
59 AT5G24610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G49550.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.59 0.33 -0.32
60 AT1G50700 calcium-dependent protein kinase 33 calcium-dependent protein kinase
33		 -0.58 0.33 -0.3
61 AT3G22440 FRIGIDA-like protein -0.58 0.33 -0.3
62 AT3G53040 late embryogenesis abundant protein, putative / LEA
protein, putative		 -0.57 0.31 -0.33
63 AT4G38210 expansin A20 ATEXP20, expansin A20, ATHEXP
ALPHA 1.23, EXPANSIN 20, expansin
A20		 -0.57 0.33 -0.31
64 AT1G16310 Cation efflux family protein -0.56 0.33 -0.31
65 AT3G21090 ABC-2 type transporter family protein ATP-binding cassette G15 -0.56 0.32 -0.32
66 AT1G79360 organic cation/carnitine transporter 2 organic cation/carnitine
transporter 2, ORGANIC CATION
TRANSPORTER 2, organic
cation/carnitine transporter 2		 -0.56 0.31 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
67 C0017 sn-Glycero-3-phosphocholine sn-Glycero-3-phosphocholine L-1-Glycero-3-phosphocholine - -0.8 0.43 -0.44 C0017
68 C0146 Mannitol D-Mannitol Mannitol mannitol degradation II -0.67 0.47 -0.45 C0146