AT4G29820 : ARABIDOPSIS THALIANA HOMOLOG OF CFIM-25
Query Information
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AGICode AT4G29820
Description homolog of CFIM-25
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G29820 homolog of CFIM-25 ARABIDOPSIS THALIANA HOMOLOG OF
CFIM-25, homolog of CFIM-25		 1 0.31 -0.32
2 AT5G49650 xylulose kinase-2 xylulose kinase-2, XYLULOSE KINASE
2		 0.84 0.32 -0.31
3 AT5G55480 SHV3-like 1 Glycerophosphodiester
phosphodiesterase (GDPD) like 4,
glycerophosphodiesterase-like 1,
SHV3-like 1		 -0.78 0.3 -0.33
4 AT3G13570 SC35-like splicing factor 30A SC35-like splicing factor 30A,
SC35-like splicing factor 30A		 -0.77 0.33 -0.31
5 AT5G14440 Surfeit locus protein 2 (SURF2) -0.76 0.32 -0.3
6 AT2G31270 homolog of yeast CDT1 A ARABIDOPSIS HOMOLOG OF YEAST CDT1
A, ARABIDOPSIS HOMOLOG OF YEAST
CDT1, homolog of yeast CDT1 A		 -0.76 0.33 -0.33
7 AT5G66540 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA
processing; LOCATED IN: cytosol, nucleolus, nucleus;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12
growth stages; CONTAINS InterPro DOMAIN/s: U3 small
nucleolar ribonucleoprotein complex, subunit Mpp10p
(InterPro:IPR012173), Mpp10 protein (InterPro:IPR007151);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 -0.75 0.33 -0.31
8 AT1G64330 myosin heavy chain-related -0.75 0.3 -0.34
9 AT2G14890 arabinogalactan protein 9 arabinogalactan protein 9 -0.74 0.31 -0.32
10 AT5G29000 Homeodomain-like superfamily protein PHR1-like 1 0.74 0.32 -0.3
11 AT5G22270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits
to 136 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.74 0.32 -0.31
12 AT2G04780 FASCICLIN-like arabinoogalactan 7 FASCICLIN-like arabinoogalactan 7 -0.74 0.33 -0.33
13 AT5G03455 Rhodanese/Cell cycle control phosphatase superfamily
protein		 ARSENATE REDUCTASE 2, ARATH;CDC25,
CDC25		 0.73 0.31 -0.3
14 AT2G11910 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 92883 Blast hits to
31060 proteins in 1576 species: Archae - 765; Bacteria -
32670; Metazoa - 21164; Fungi - 12252; Plants - 4238;
Viruses - 1282; Other Eukaryotes - 20512 (source: NCBI
BLink).		 -0.73 0.33 -0.32
15 AT1G53560 Ribosomal protein L18ae family 0.73 0.3 -0.31
16 AT3G11964 RNA binding;RNA binding -0.73 0.31 -0.33
17 AT1G25490 ARM repeat superfamily protein ATB BETA BETA, ENHANCED ETHYLENE
RESPONSE 1, ROOTS CURL IN NPA,
REGA		 -0.72 0.33 -0.3
18 AT4G29890 choline monooxygenase, putative (CMO-like) 0.72 0.29 -0.31
19 AT1G48320 Thioesterase superfamily protein 0.72 0.32 -0.33
20 AT1G53280 Class I glutamine amidotransferase-like superfamily protein DJ-1 homolog B, DJ-1 homolog B 0.72 0.3 -0.33
21 AT5G49460 ATP citrate lyase subunit B 2 ATP citrate lyase subunit B 2 -0.72 0.32 -0.34
22 AT5G65760 Serine carboxypeptidase S28 family protein 0.71 0.31 -0.31
23 AT4G14615 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2346
(InterPro:IPR018625); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G52825.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.71 0.29 -0.31
24 AT4G36400 FAD-linked oxidases family protein D-2-hydroxyglutarate dehydrogenase 0.71 0.31 -0.3
25 AT1G32440 plastidial pyruvate kinase 3 plastidial pyruvate kinase 3 -0.7 0.3 -0.29
26 AT5G65110 acyl-CoA oxidase 2 acyl-CoA oxidase 2, ATACX2 0.7 0.32 -0.32
27 AT4G30220 small nuclear ribonucleoprotein F small nuclear ribonucleoprotein F -0.7 0.31 -0.31
28 AT4G15480 UDP-Glycosyltransferase superfamily protein UGT84A1 -0.7 0.31 -0.3
29 AT3G20660 organic cation/carnitine transporter4 organic cation/carnitine
transporter4, organic
cation/carnitine transporter4		 0.7 0.33 -0.31
30 AT3G05900 neurofilament protein-related -0.7 0.32 -0.34
31 AT1G31820 Amino acid permease family protein 0.7 0.3 -0.32
32 AT4G38460 geranylgeranyl reductase geranylgeranyl reductase 0.69 0.34 -0.34
33 AT1G20220 Alba DNA/RNA-binding protein -0.69 0.35 -0.32
34 AT3G01200 PPDK regulatory protein 2 PPDK regulatory protein 2, PPDK
regulatory protein 2		 0.69 0.34 -0.29
35 AT1G80280 alpha/beta-Hydrolases superfamily protein -0.69 0.31 -0.32
36 AT3G62650 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G47485.1); Has 57 Blast hits
to 57 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.32 -0.3
37 AT1G03030 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.69 0.31 -0.32
38 AT2G33630 NAD(P)-binding Rossmann-fold superfamily protein 0.67 0.32 -0.3
39 AT1G10290 dynamin-like protein 6 dynamin-like protein 6,
DYNAMIN-RELATED PROTEIN 2A		 -0.67 0.32 -0.29
40 AT3G60180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.67 0.32 -0.32
41 AT2G21880 RAB GTPase homolog 7A RAB GTPase homolog 7A, ARABIDOPSIS
RAB GTPASE HOMOLOG G2, RAB GTPase
homolog 7A		 -0.67 0.32 -0.32
42 AT1G62810 Copper amine oxidase family protein 0.67 0.33 -0.31
43 AT3G05990 Leucine-rich repeat (LRR) family protein -0.67 0.31 -0.33
44 AT5G58490 NAD(P)-binding Rossmann-fold superfamily protein 0.67 0.31 -0.32
45 AT5G55000 potassium channel tetramerisation domain-containing protein
/ pentapeptide repeat-containing protein		 FIP2 0.67 0.31 -0.33
46 AT1G64530 Plant regulator RWP-RK family protein -0.67 0.33 -0.32
47 AT3G01520 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.67 0.33 -0.31
48 AT2G39000 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.67 0.33 -0.31
49 AT1G77030 hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases		 -0.67 0.32 -0.3
50 AT3G53180 glutamate-ammonia ligases;catalytics;glutamate-ammonia
ligases		 nodulin/glutamine synthase-like
protein		 0.67 0.33 -0.31
51 AT1G55000 peptidoglycan-binding LysM domain-containing protein 0.67 0.31 -0.32
52 AT4G31360 selenium binding -0.66 0.32 -0.32
53 AT1G63930 from the Czech 'roh' meaning 'corner' from the Czech 'roh' meaning
'corner'		 -0.66 0.31 -0.32
54 AT5G10020 Leucine-rich receptor-like protein kinase family protein -0.66 0.34 -0.34
55 AT3G07350 Protein of unknown function (DUF506) 0.66 0.3 -0.3
56 AT1G07970 CONTAINS InterPro DOMAIN/s: Cytochrome B561-related,
N-terminal (InterPro:IPR019176); Has 215 Blast hits to 213
proteins in 79 species: Archae - 0; Bacteria - 6; Metazoa -
131; Fungi - 22; Plants - 42; Viruses - 0; Other Eukaryotes
- 14 (source: NCBI BLink).		 -0.65 0.33 -0.32
57 AT3G62960 Thioredoxin superfamily protein -0.65 0.31 -0.32
58 AT4G28190 Developmental regulator, ULTRAPETALA ULTRAPETALA, ULTRAPETALA1 -0.65 0.31 -0.31
59 AT1G69490 NAC-like, activated by AP3/PI Arabidopsis NAC domain containing
protein 29, NAC-LIKE, ACTIVATED BY
AP3/PI, NAC-like, activated by
AP3/PI		 0.65 0.33 -0.32
60 AT5G39840 ATP-dependent RNA helicase, mitochondrial, putative -0.65 0.32 -0.31
61 AT3G61540 alpha/beta-Hydrolases superfamily protein 0.64 0.31 -0.31
62 AT5G10870 chorismate mutase 2 chorismate mutase 2, chorismate
mutase 2		 0.64 0.33 -0.32
63 AT3G14790 rhamnose biosynthesis 3 ARABIDOPSIS THALIANA RHAMNOSE
BIOSYNTHESIS 3, rhamnose
biosynthesis 3		 -0.64 0.31 -0.33
64 AT2G43540 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 27
Blast hits to 27 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.33 -0.34
65 AT5G06930 LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures;
EXPRESSED DURING: 7 growth stages; BEST Arabidopsis
thaliana protein match is: nucleolar protein gar2-related
(TAIR:AT2G42320.2); Has 3369 Blast hits to 1526 proteins in
313 species: Archae - 2; Bacteria - 910; Metazoa - 754;
Fungi - 336; Plants - 137; Viruses - 11; Other Eukaryotes -
1219 (source: NCBI BLink).		 -0.64 0.31 -0.32
66 AT2G35320 EYES ABSENT homolog EYES ABSENT homolog, EYES ABSENT
homolog		 0.64 0.32 -0.3
67 AT1G13020 eukaryotic initiation factor 4B2 eukaryotic initiation factor 4B2 -0.64 0.34 -0.31
68 AT5G09870 cellulose synthase 5 cellulose synthase 5 -0.64 0.31 -0.3
69 AT3G62970 zinc finger (C3HC4-type RING finger) family protein 0.64 0.3 -0.28
70 AT4G17160 RAB GTPase homolog B1A ATRAB2B, RAB GTPase homolog B1A,
RAB GTPase homolog B1A		 -0.64 0.31 -0.32
71 AT5G40890 chloride channel A chloride channel A, ATCLCA,
chloride channel A, CHLORIDE
CHANNEL-A, CHLORIDE CHANNEL A		 0.64 0.33 -0.31
72 AT5G03770 KDO transferase A AtKdtA, KDO transferase A 0.64 0.32 -0.29
73 AT3G05120 alpha/beta-Hydrolases superfamily protein GA INSENSITIVE DWARF1A, GA
INSENSITIVE DWARF1A		 0.63 0.29 -0.32
74 AT2G35795 Chaperone DnaJ-domain superfamily protein 0.63 0.31 -0.3
75 AT1G13560 aminoalcoholphosphotransferase 1 aminoalcoholphosphotransferase 1,
ATAAPT1		 -0.63 0.32 -0.34
76 AT5G18440 CONTAINS InterPro DOMAIN/s: Nuclear fragile X mental
retardation-interacting protein 1, conserved region
(InterPro:IPR019496); Has 1333 Blast hits to 1211 proteins
in 205 species: Archae - 0; Bacteria - 137; Metazoa - 339;
Fungi - 162; Plants - 70; Viruses - 6; Other Eukaryotes -
619 (source: NCBI BLink).		 AtNUFIP, nuclear FMRP-interacting
protein		 -0.63 0.32 -0.34
77 AT5G05820 Nucleotide-sugar transporter family protein -0.63 0.3 -0.32
78 AT5G36910 thionin 2.2 thionin 2.2 -0.63 0.34 -0.32
79 AT5G64740 cellulose synthase 6 cellulose synthase 6, E112,
ISOXABEN RESISTANT 2, PROCUSTE 1		 -0.63 0.3 -0.31
80 AT1G07790 Histone superfamily protein HTB1 -0.63 0.3 -0.32
81 AT4G01026 PYR1-like 7 PYR1-like 7, regulatory components
of ABA receptor 2		 0.63 0.31 -0.32
82 AT1G80020 transposable element gene -0.63 0.33 -0.34
83 AT1G51200 A20/AN1-like zinc finger family protein 0.63 0.3 -0.31
84 AT2G24590 RNA recognition motif and CCHC-type zinc finger domains
containing protein		 RS-containing zinc finger protein
22a, RS-containing zinc finger
protein 22a		 -0.63 0.33 -0.31
85 AT1G03090 methylcrotonyl-CoA carboxylase alpha chain, mitochondrial /
3-methylcrotonyl-CoA carboxylase 1 (MCCA)		 MCCA 0.63 0.3 -0.31
86 AT5G47560 tonoplast dicarboxylate transporter ATSDAT, TONOPLAST DICARBOXYLATE
TRANSPORTER, tonoplast
dicarboxylate transporter		 0.62 0.32 -0.31
87 AT3G23740 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: C globular stage, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G14120.1); Has 155 Blast
hits to 130 proteins in 48 species: Archae - 0; Bacteria -
16; Metazoa - 19; Fungi - 48; Plants - 47; Viruses - 0;
Other Eukaryotes - 25 (source: NCBI BLink).		 -0.62 0.31 -0.3
88 AT2G26730 Leucine-rich repeat protein kinase family protein -0.62 0.31 -0.33
89 AT4G30990 ARM repeat superfamily protein -0.62 0.3 -0.33
90 AT2G34357 ARM repeat superfamily protein -0.62 0.31 -0.31
91 AT5G04420 Galactose oxidase/kelch repeat superfamily protein -0.62 0.33 -0.33
92 AT1G28580 GDSL-like Lipase/Acylhydrolase superfamily protein 0.62 0.34 -0.31
93 AT3G25910 Protein of unknown function (DUF1644) 0.62 0.33 -0.31
94 AT5G23480 SWIB/MDM2 domain;Plus-3;GYF -0.62 0.33 -0.3
95 AT3G03150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G17165.1); Has 39 Blast
hits to 39 proteins in 11 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.31 -0.31
96 AT5G66110 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 27		 0.62 0.34 -0.3
97 AT1G70290 trehalose-6-phosphatase synthase S8 ATTPS8, ATTPSC,
trehalose-6-phosphatase synthase
S8		 0.62 0.31 -0.32
98 AT5G12470 Protein of unknown function (DUF3411) -0.61 0.31 -0.3
99 AT2G34040 Apoptosis inhibitory protein 5 (API5) -0.61 0.33 -0.32
100 AT2G05760 Xanthine/uracil permease family protein -0.61 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
101 C0082 Digalactosyldiacylglycerol-36:3 - Digalactosyldiacylglycerol-36:3 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.72 0.52 -0.48 C0082
102 C0248 Sulfoquinovosyldiacylglycerol-36:3 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.71 0.49 -0.5 C0248
103 C0083 Digalactosyldiacylglycerol-36:4 - Digalactosyldiacylglycerol-36:4 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.65 0.49 -0.47 C0083
104 C0251 Sulfoquinovosyldiacylglycerol-36:6 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.65 0.49 -0.49 C0251
105 C0249 Sulfoquinovosyldiacylglycerol-36:4 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.61 0.35 -0.33 C0249