AT4G29540 : AtLpxA
Query Information
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AGICode AT4G29540
Description bacterial transferase hexapeptide repeat-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G29540 bacterial transferase hexapeptide repeat-containing protein AtLpxA, LpxA 1 0.32 -0.33
2 AT5G41600 VIRB2-interacting protein 3 VIRB2-interacting protein 3,
Reticulan like protein B4		 0.72 0.31 -0.31
3 AT1G13690 ATPase E1 ATPase E1 0.68 0.31 -0.33
4 AT1G55120 beta-fructofuranosidase 5 6-fructan exohydrolase,
beta-fructofuranosidase 5,
beta-fructofuranosidase 5		 -0.67 0.33 -0.29
5 AT3G03970 ARM repeat superfamily protein 0.66 0.31 -0.31
6 AT3G54510 Early-responsive to dehydration stress protein (ERD4) -0.66 0.32 -0.32
7 AT1G14790 RNA-dependent RNA polymerase 1 ATRDRP1, RNA-dependent RNA
polymerase 1		 -0.66 0.31 -0.3
8 AT3G17830 Molecular chaperone Hsp40/DnaJ family protein 0.65 0.32 -0.31
9 AT2G24140 Protein of unknown function, DUF593 0.65 0.32 -0.3
10 AT4G38590 beta-galactosidase 14 beta-galactosidase 14 -0.64 0.28 -0.3
11 AT2G19130 S-locus lectin protein kinase family protein -0.64 0.31 -0.32
12 AT2G35050 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 -0.64 0.35 -0.32
13 AT1G18450 actin-related protein 4 actin-related protein 4,
actin-related protein 4		 0.64 0.33 -0.29
14 AT5G11360 Interleukin-1 receptor-associated kinase 4 protein -0.63 0.32 -0.33
15 AT2G46370 Auxin-responsive GH3 family protein FAR-RED INSENSITIVE 219, JASMONATE
RESISTANT 1		 -0.61 0.32 -0.3
16 AT3G47420 phosphate starvation-induced gene 3 Glycerol-3-phosphate permease 1,
phosphate starvation-induced gene
3, Glycerol-3-phosphate permease
1, phosphate starvation-induced
gene 3		 -0.61 0.32 -0.3
17 AT2G17560 high mobility group B4 high mobility group B4, NFD04,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR D4		 0.61 0.31 -0.31
18 AT5G17070 CONTAINS InterPro DOMAIN/s: Protein phosphatase 4 core
regulatory subunit R2 (InterPro:IPR015267); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.61 0.33 -0.31
19 AT2G42490 Copper amine oxidase family protein -0.61 0.31 -0.32
20 AT1G09190 Tetratricopeptide repeat (TPR)-like superfamily protein 0.6 0.32 -0.31
21 AT3G23870 Protein of unknown function (DUF803) -0.6 0.3 -0.3
22 AT3G55000 tonneau family protein TONNEAU 1, TONNEAU 1A 0.59 0.3 -0.34
23 AT1G66530 Arginyl-tRNA synthetase, class Ic 0.59 0.31 -0.31
24 AT3G19120 PIF / Ping-Pong family of plant transposases 0.58 0.29 -0.33
25 AT5G46040 Major facilitator superfamily protein -0.58 0.31 -0.33
26 AT1G09290 unknown protein; Has 73 Blast hits to 71 proteins in 26
species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 11;
Plants - 54; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 0.58 0.32 -0.3
27 AT2G20790 clathrin adaptor complexes medium subunit family protein -0.58 0.31 -0.33
28 AT2G06700 transposable element gene -0.58 0.31 -0.31
29 AT1G73350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; Has 46 Blast hits to 46 proteins
in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi
- 3; Plants - 36; Viruses - 0; Other Eukaryotes - 4
(source: NCBI BLink).		 0.58 0.34 -0.3
30 AT4G01450 nodulin MtN21 /EamA-like transporter family protein -0.58 0.34 -0.33
31 AT1G29140 Pollen Ole e 1 allergen and extensin family protein -0.57 0.34 -0.31
32 AT1G26990 transposable element gene -0.57 0.33 -0.33
33 AT1G31910 GHMP kinase family protein -0.57 0.32 -0.33
34 AT1G01760 adenosine deaminases;RNA binding;RNA binding;adenosine
deaminases		 0.57 0.32 -0.33
35 AT3G50050 Eukaryotic aspartyl protease family protein 0.57 0.32 -0.33
36 AT2G21130 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.57 0.31 -0.32
37 AT5G21010 BTB-POZ and MATH domain 5 BTB-POZ AND MATH DOMAIN 5, BTB-POZ
and MATH domain 5		 0.57 0.32 -0.32
38 AT4G32120 Galactosyltransferase family protein 0.57 0.33 -0.31
39 AT3G23590 REF4-related 1 MED33A, REF4-related 1 -0.56 0.31 -0.31
40 AT1G59600 ZCW7 ZCW7 0.56 0.32 -0.31
41 AT2G35550 basic pentacysteine 7 BASIC PENTACYSTEINE 7, BBR, basic
pentacysteine 7		 -0.56 0.32 -0.33
42 AT3G30750 transposable element gene 0.56 0.33 -0.33
43 AT1G36020 BEST Arabidopsis thaliana protein match is: DEAD/DEAH box
RNA helicase family protein (TAIR:AT1G35530.1); Has 18
Blast hits to 18 proteins in 5 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.56 0.31 -0.31
44 AT5G10140 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 25, FLC, FLOWERING
LOCUS C, FLOWERING LOCUS F		 0.56 0.31 -0.32
45 AT3G17790 purple acid phosphatase 17 ATACP5, ATPAP17, purple acid
phosphatase 17		 -0.56 0.32 -0.31
46 AT2G32850 Protein kinase superfamily protein -0.56 0.31 -0.3
47 AT3G15910 unknown protein; Has 12 Blast hits to 12 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.56 0.31 -0.31
48 AT2G13840 Polymerase/histidinol phosphatase-like 0.55 0.32 -0.34
49 AT3G17590 transcription regulatory protein SNF5, putative (BSH) BUSHY GROWTH, CHE1 0.55 0.32 -0.31
50 AT5G56250 hapless 8 HAPLESS 8 -0.55 0.33 -0.3
51 AT2G43250 unknown protein; Has 32 Blast hits to 32 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.55 0.32 -0.32
52 AT4G33290 F-box and associated interaction domains-containing protein -0.55 0.31 -0.33
53 AT1G73010 phosphate starvation-induced gene 2 pyrophosphate-specific
phosphatase1, phosphate
starvation-induced gene 2,
pyrophosphate-specific
phosphatase1, phosphate
starvation-induced gene 2		 -0.54 0.31 -0.3
54 AT4G16670 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 -0.54 0.33 -0.33
55 AT1G47270 tubby like protein 6 tubby like protein 6, tubby like
protein 6		 0.54 0.3 -0.32
56 AT4G23000 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.54 0.33 -0.33
57 AT1G78720 SecY protein transport family protein -0.53 0.33 -0.32
58 AT4G27850 Glycine-rich protein family -0.53 0.3 -0.31
59 AT5G49320 Protein of unknown function (DUF1218) -0.52 0.33 -0.31
60 AT1G21640 NAD kinase 2 NAD KINASE 2, NAD kinase 2 -0.52 0.32 -0.32
61 AT1G36100 myosin heavy chain-related -0.52 0.32 -0.32
62 AT2G26660 SPX domain gene 2 ARABIDOPSIS THALIANA SPX DOMAIN
GENE 2, SPX domain gene 2		 -0.51 0.3 -0.31
63 AT1G30810 Transcription factor jumonji (jmj) family protein / zinc
finger (C5HC2 type) family protein		 -0.51 0.32 -0.31
64 AT4G10460 transposable element gene -0.51 0.31 -0.32
65 AT2G04490 transposable element gene -0.51 0.3 -0.31
66 AT2G29920 unknown protein; Has 14 Blast hits to 9 proteins in 5
species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink).		 -0.51 0.33 -0.31
67 AT2G27440 pseudogene of rac GTPase activating protein -0.51 0.34 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
68 C0262 UDP-glucuronic acid - UDP-D-glucuronate xylan biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate),
UDP-D-apiose biosynthesis (from UDP-D-glucuronate),
galactose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis 		-0.6 0.44 -0.46 C0262
69 C0140 Lysine L-Lysine L-Lysine lysine degradation II,
tRNA charging,
lysine biosynthesis VI,
lysine degradation I 		-0.56 0.33 -0.32 C0140