AT4G29620 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G29620
Description Cytidine/deoxycytidylate deaminase family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G29620 Cytidine/deoxycytidylate deaminase family protein 1 0.29 -0.32
2 AT4G34430 DNA-binding family protein SWITCH/SUCROSE NONFERMENTING 3D,
CHB3		 0.7 0.33 -0.3
3 AT2G17930 Phosphatidylinositol 3- and 4-kinase family protein with
FAT domain		 0.7 0.31 -0.3
4 AT1G55325 RNA polymerase II transcription mediators GRAND CENTRAL, MACCHI-BOU 2 0.67 0.36 -0.31
5 AT3G50590 Transducin/WD40 repeat-like superfamily protein 0.66 0.33 -0.31
6 AT1G01960 SEC7-like guanine nucleotide exchange family protein embryo sac development arrest 10 0.66 0.32 -0.32
7 AT5G18230 transcription regulator NOT2/NOT3/NOT5 family protein 0.65 0.29 -0.3
8 AT5G07280 Leucine-rich repeat transmembrane protein kinase EXCESS MICROSPOROCYTES1, EXTRA
SPOROGENOUS CELLS		 0.64 0.31 -0.3
9 AT4G29790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits
to 357 proteins in 124 species: Archae - 0; Bacteria - 74;
Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other
Eukaryotes - 190 (source: NCBI BLink).		 0.64 0.32 -0.31
10 AT4G35800 RNA polymerase II large subunit RNA polymerase II large subunit,
RNA POLYMERASE II LARGE SUBUNIT,
RNA_POL_II_LSRNA_POL_II_LS, RNA
POLYMERASE II LARGE SUBUNIT		 0.64 0.3 -0.32
11 AT1G55350 calpain-type cysteine protease family ATDEK1, DEFECTIVE KERNEL 1, embryo
defective 1275, EMBRYO DEFECTIVE
80		 0.64 0.3 -0.33
12 AT3G50370 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 26 plant
structures; EXPRESSED DURING: 15 growth stages; Has 27734
Blast hits to 16708 proteins in 1259 species: Archae - 81;
Bacteria - 3434; Metazoa - 10876; Fungi - 2514; Plants -
987; Viruses - 212; Other Eukaryotes - 9630 (source: NCBI
BLink).		 0.63 0.33 -0.32
13 AT5G57130 Clp amino terminal domain-containing protein 0.62 0.33 -0.32
14 AT5G16280 Tetratricopeptide repeat (TPR)-like superfamily protein 0.62 0.33 -0.3
15 AT5G11040 TRS120 AtTRS120, TRS120 0.61 0.32 -0.32
16 AT5G01400 HEAT repeat-containing protein ENHANCED SILENCING PHENOTYPE 4 0.61 0.33 -0.32
17 AT2G35630 ARM repeat superfamily protein GEM1, MICROTUBULE ORGANIZATION 1 0.61 0.33 -0.35
18 AT4G03390 STRUBBELIG-receptor family 3 STRUBBELIG-receptor family 3 0.61 0.32 -0.33
19 AT3G54670 Structural maintenance of chromosomes (SMC) family protein ATSMC1, STRUCTURAL MAINTENANCE OF
CHROMOSOMES 1, TITAN8		 0.61 0.32 -0.32
20 AT4G24560 ubiquitin-specific protease 16 ubiquitin-specific protease 16 0.61 0.31 -0.34
21 AT5G58040 homolog of yeast FIP1 [V] homolog of yeast FIP1 [V],
ATFIPS5, homolog of yeast FIP1
[V], FIPS5		 0.61 0.32 -0.31
22 AT2G27950 Ring/U-Box superfamily protein 0.6 0.32 -0.33
23 AT1G35200 60S ribosomal protein L4/L1 (RPL4B), pseudogene, similar to
60S ribosomal protein L4 (fragment) GB:P49691 from
(Arabidopsis thaliana); blastp match of 50% identity and
6.3e-17 P-value to SP|Q9XF97|RL4_PRUAR 60S ribosomal
protein L4 (L1). (Apricot) {Prunus armeniaca}		 0.6 0.33 -0.33
24 AT4G39756 Galactose oxidase/kelch repeat superfamily protein -0.59 0.32 -0.3
25 AT5G43810 Stabilizer of iron transporter SufD / Polynucleotidyl
transferase		 ARGONAUTE 10, PINHEAD, ZWILLE 0.59 0.33 -0.34
26 AT1G03060 Beige/BEACH domain ;WD domain, G-beta repeat protein SPIRRIG 0.59 0.33 -0.31
27 AT5G19310 Homeotic gene regulator 0.59 0.33 -0.31
28 AT2G04580 transposable element gene -0.58 0.31 -0.3
29 AT1G15890 Disease resistance protein (CC-NBS-LRR class) family -0.58 0.33 -0.3
30 AT1G57650 ATP binding 0.58 0.31 -0.31
31 AT5G60100 pseudo-response regulator 3 pseudo-response regulator 3,
pseudo-response regulator 3		 0.58 0.32 -0.31
32 AT4G00660 RNAhelicase-like 8 ATRH8, RNAhelicase-like 8 0.58 0.33 -0.29
33 AT4G17785 myb domain protein 39 myb domain protein 39 -0.57 0.33 -0.33
34 AT5G27970 ARM repeat superfamily protein 0.57 0.32 -0.3
35 AT4G37230 Photosystem II manganese-stabilising protein (PsbO) family 0.57 0.31 -0.32
36 AT1G17580 myosin 1 ARABIDOPSIS MYOSIN 1, myosin 1,
MYOSIN XI 1		 0.57 0.32 -0.32
37 AT4G25410 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.56 0.32 -0.33
38 AT2G13370 chromatin remodeling 5 chromatin remodeling 5 0.56 0.33 -0.32
39 AT1G18560 BED zinc finger ;hAT family dimerisation domain 0.55 0.3 -0.3
40 AT2G02640 Cysteine/Histidine-rich C1 domain family protein -0.54 0.32 -0.31
41 AT5G53740 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: synergid; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G53905.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.54 0.31 -0.32
42 AT4G18510 CLAVATA3/ESR-related 2 CLAVATA3/ESR-related 2 -0.53 0.34 -0.28
43 AT1G24420 HXXXD-type acyl-transferase family protein -0.53 0.3 -0.3
44 AT1G32480 isocitrate dehydrogenase IV isocitrate dehydrogenase IV 0.53 0.29 -0.32
45 AT5G67020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G50340.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.53 0.3 -0.31
46 AT1G04950 TATA BOX ASSOCIATED FACTOR II 59 ATTAF6, EMBRYO DEFECTIVE 2781,
TBP-associated factor 6, TATA BOX
ASSOCIATED FACTOR II 59		 0.53 0.29 -0.32
47 AT2G18970 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.53 0.31 -0.3
48 AT5G56620 NAC domain containing protein 99 NAC domain containing protein 99,
NAC domain containing protein 99		 -0.52 0.3 -0.32
49 AT1G74480 RWP-RK domain-containing protein AtRKD2, RWP-RK domain containing 2 -0.52 0.33 -0.32
50 AT4G32760 ENTH/VHS/GAT family protein 0.52 0.33 -0.31
51 AT1G04090 Plant protein of unknown function (DUF946) -0.52 0.3 -0.31
52 AT2G20380 Galactose oxidase/kelch repeat superfamily protein -0.52 0.33 -0.31
53 AT1G32090 early-responsive to dehydration stress protein (ERD4) 0.51 0.32 -0.33
54 AT5G04560 HhH-GPD base excision DNA repair family protein DEMETER 0.51 0.3 -0.32
55 AT3G12000 S-locus related protein SLR1, putative (S1) 0.51 0.31 -0.31
56 AT2G18800 xyloglucan endotransglucosylase/hydrolase 21 XYLOGLUCAN
ENDOTRANSGLUCOSYLASE/HYDROLASE 21,
xyloglucan
endotransglucosylase/hydrolase 21		 -0.51 0.32 -0.32
57 AT3G45530 Cysteine/Histidine-rich C1 domain family protein -0.5 0.3 -0.32
58 AT1G55430 Cysteine/Histidine-rich C1 domain family protein -0.5 0.31 -0.32
59 AT2G30730 Protein kinase superfamily protein -0.5 0.32 -0.31
60 AT5G04480 UDP-Glycosyltransferase superfamily protein -0.5 0.32 -0.31
61 AT5G15480 C2H2-type zinc finger family protein -0.5 0.34 -0.33
62 AT1G68880 basic leucine-zipper 8 basic leucine-zipper 8, basic
leucine-zipper 8		 -0.5 0.32 -0.34
63 AT5G56330 alpha carbonic anhydrase 8 alpha carbonic anhydrase 8, A.
THALIANA ALPHA CARBONIC ANHYDRASE
8		 -0.5 0.28 -0.3
64 AT2G30680 BEST Arabidopsis thaliana protein match is: glucan
synthase-like 3 (TAIR:AT2G31960.2); Has 80 Blast hits to 80
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.49 0.34 -0.3
65 AT2G36020 HVA22-like protein J HVA22-like protein J -0.49 0.31 -0.32
66 AT4G17580 Bax inhibitor-1 family protein -0.48 0.31 -0.34
67 AT4G11210 Disease resistance-responsive (dirigent-like protein)
family protein		 -0.48 0.32 -0.31
68 AT5G65850 F-box and associated interaction domains-containing protein -0.48 0.34 -0.29
69 AT5G39785 Protein of unknown function (DUF1666) -0.48 0.3 -0.33
70 AT3G42780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G09130.1); Has 5 Blast hits to
5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.48 0.32 -0.3
71 AT1G17300 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G17285.1); Has 27 Blast hits
to 27 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.48 0.32 -0.31
72 AT3G55870 ADC synthase superfamily protein -0.47 0.31 -0.31
73 AT2G13680 callose synthase 5 ARABIDOPSIS THALIANA GLUCAN
SYNTHASE-LIKE 2, callose synthase
5, GLUCAN SYNTHASE-LIKE 2		 -0.47 0.29 -0.33
74 AT1G70110 Concanavalin A-like lectin protein kinase family protein -0.47 0.32 -0.32
75 AT5G55590 Pectin lyase-like superfamily protein QUARTET 1 -0.47 0.31 -0.3
76 AT2G04675 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.46 0.32 -0.31
77 AT3G61450 syntaxin of plants 73 ATSYP73, syntaxin of plants 73 -0.46 0.32 -0.3
78 AT3G20690 F-box and associated interaction domains-containing protein -0.46 0.33 -0.3
79 AT2G31085 CLAVATA3/ESR-RELATED 6 AtCLE6, CLAVATA3/ESR-RELATED 6 -0.46 0.31 -0.33
80 AT2G04680 Cysteine/Histidine-rich C1 domain family protein -0.45 0.33 -0.32
81 AT1G16290 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast,
vacuole; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Lytic
transglycosylase-like, catalytic (InterPro:IPR008258); Has
171 Blast hits to 155 proteins in 40 species: Archae - 0;
Bacteria - 54; Metazoa - 0; Fungi - 0; Plants - 55; Viruses
- 0; Other Eukaryotes - 62 (source: NCBI BLink).		 -0.45 0.32 -0.31