AT4G29520 : -
Query Information
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AGICode AT4G29520
Description LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Saposin B (InterPro:IPR008139); Has 137 Blast hits to 137 proteins in 50 species: Archae - 2; Bacteria - 0; Metazoa - 41; Fungi - 10; Plants - 36; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G29520 LOCATED IN: endoplasmic reticulum, plasma membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s: Saposin B
(InterPro:IPR008139); Has 137 Blast hits to 137 proteins in
50 species: Archae - 2; Bacteria - 0; Metazoa - 41; Fungi -
10; Plants - 36; Viruses - 0; Other Eukaryotes - 48
(source: NCBI BLink).		 1 0.29 -0.29
2 AT2G20390 unknown protein; Has 50 Blast hits to 50 proteins in 18
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.9 0.3 -0.32
3 AT5G61790 calnexin 1 ATCNX1, calnexin 1 0.86 0.3 -0.31
4 AT2G37250 adenosine kinase adenosine kinase, ATPADK1 0.85 0.31 -0.29
5 AT4G24920 secE/sec61-gamma protein transport protein 0.84 0.29 -0.31
6 AT3G62150 P-glycoprotein 21 ATP-binding cassette B21,
P-glycoprotein 21		 0.83 0.3 -0.33
7 AT1G21900 emp24/gp25L/p24 family/GOLD family protein 0.82 0.3 -0.29
8 AT1G74240 Mitochondrial substrate carrier family protein 0.82 0.3 -0.32
9 AT5G26860 lon protease 1 lon protease 1, LON_ARA_ARA 0.82 0.31 -0.32
10 AT5G62050 homolog of yeast oxidase assembly 1 (OXA1) ARABIDOPSIS THALIANA HOMOLOG OF
YEAST OXIDASE ASSEMBLY 1 (OXA1),
homolog of yeast oxidase assembly
1 (OXA1), HOMOLOG OF YEAST OXIDASE
ASSEMBLY 1 (OXA1) IN ARABIDOPSIS
THALIANA		 0.82 0.32 -0.32
11 AT1G16740 Ribosomal protein L20 0.81 0.31 -0.32
12 AT2G20760 Clathrin light chain protein 0.81 0.31 -0.3
13 AT3G62600 DNAJ heat shock family protein ATERDJ3B, ERDJ3B 0.81 0.3 -0.32
14 AT5G27395 Mitochondrial inner membrane translocase complex, subunit
Tim44-related protein		 0.81 0.29 -0.32
15 AT4G23710 vacuolar ATP synthase subunit G2 vacuolar ATP synthase subunit G2,
VACUOLAR ATP SYNTHASE SUBUNIT G2,
VHA-G2		 0.81 0.28 -0.29
16 AT1G09210 calreticulin 1b AtCRT1b, calreticulin 1b 0.8 0.31 -0.34
17 AT2G45070 Preprotein translocase Sec, Sec61-beta subunit protein SUPPRESSORS OF SECRETION-DEFECTIVE
61 BETA		 0.8 0.31 -0.3
18 AT4G35260 isocitrate dehydrogenase 1 isocitrate dehydrogenase I,
isocitrate dehydrogenase 1		 0.8 0.31 -0.29
19 AT1G09300 Metallopeptidase M24 family protein 0.8 0.33 -0.32
20 AT4G26910 Dihydrolipoamide succinyltransferase 0.8 0.33 -0.32
21 AT5G05370 Cytochrome b-c1 complex, subunit 8 protein 0.8 0.33 -0.31
22 AT5G08300 Succinyl-CoA ligase, alpha subunit 0.8 0.31 -0.33
23 AT1G18630 glycine-rich RNA-binding protein 6 glycine-rich RNA-binding protein 6 0.79 0.32 -0.32
24 AT4G01660 ABC transporter 1 ABC transporter 1, ABC transporter
1, ATATH10		 0.79 0.32 -0.3
25 AT2G02860 sucrose transporter 2 ARABIDOPSIS THALIANA SUCROSE
TRANSPORTER 3, ATSUT2, SUCROSE
TRANSPORTER 3, sucrose transporter
2		 0.79 0.32 -0.33
26 AT4G31300 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 PBA1 0.79 0.32 -0.3
27 AT5G07800 Flavin-binding monooxygenase family protein -0.79 0.33 -0.32
28 AT4G10040 cytochrome c-2 cytochrome c-2 0.79 0.31 -0.31
29 AT4G26970 aconitase 2 aconitase 2 0.78 0.3 -0.29
30 AT4G24330 Protein of unknown function (DUF1682) 0.78 0.33 -0.33
31 AT5G43170 zinc-finger protein 3 zinc-finger protein 3, zinc-finger
protein 3		 0.78 0.33 -0.31
32 AT3G51790 transmembrane protein G1P-related 1 transmembrane protein G1P-related
1, transmembrane protein
G1P-related 1		 0.78 0.3 -0.33
33 AT1G56340 calreticulin 1a AtCRT1a, calreticulin 1,
calreticulin 1a		 0.78 0.31 -0.3
34 AT3G22630 20S proteasome beta subunit D1 20S proteasome beta subunit D1,
PRCGB		 0.78 0.33 -0.33
35 AT4G39980 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 3-deoxy-D-arabino-heptulosonate
7-phosphate synthase 1		 0.78 0.32 -0.3
36 AT2G31060 elongation factor family protein EMBRYO DEFECTIVE 2785 0.78 0.31 -0.32
37 AT3G62450 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 35 Blast hits to 35
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.78 0.32 -0.3
38 AT1G29310 SecY protein transport family protein 0.78 0.31 -0.33
39 AT1G07240 UDP-glucosyl transferase 71C5 UDP-glucosyl transferase 71C5 0.78 0.31 -0.3
40 AT5G56170 LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 LORELEI-LIKE-GPI-ANCHORED PROTEIN
1		 0.77 0.32 -0.29
41 AT4G16660 heat shock protein 70 (Hsp 70) family protein 0.77 0.33 -0.3
42 AT1G44170 aldehyde dehydrogenase 3H1 aldehyde dehydrogenase 3H1,
aldehyde dehydrogenase 4		 0.77 0.33 -0.31
43 AT1G75460 ATP-dependent protease La (LON) domain protein -0.77 0.32 -0.31
44 AT2G17130 isocitrate dehydrogenase subunit 2 isocitrate dehydrogenase II,
isocitrate dehydrogenase subunit 2		 0.77 0.31 -0.32
45 AT3G60540 Preprotein translocase Sec, Sec61-beta subunit protein 0.77 0.32 -0.34
46 AT2G39970 Mitochondrial substrate carrier family protein ABERRANT PEROXISOME MORPHOLOGY 3,
peroxisomal membrane protein 38,
peroxisomal NAD carrier		 0.77 0.32 -0.28
47 AT4G37560 Acetamidase/Formamidase family protein -0.77 0.3 -0.32
48 AT2G32920 PDI-like 2-3 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 9, PDI-like
2-3, PROTEIN DISULFIDE ISOMERASE
9, PDI-like 2-3		 0.77 0.31 -0.34
49 ATMG00690 hypothetical protein ORF240A 0.77 0.32 -0.32
50 AT5G25280 serine-rich protein-related -0.77 0.3 -0.33
51 AT2G03800 D-aminoacyl-tRNA deacylases GEKO1 0.76 0.3 -0.33
52 AT4G23850 AMP-dependent synthetase and ligase family protein long-chain acyl-CoA synthetase 4 0.76 0.32 -0.31
53 AT3G49320 Metal-dependent protein hydrolase 0.76 0.32 -0.32
54 AT1G67250 Proteasome maturation factor UMP1 0.76 0.31 -0.31
55 AT4G37910 mitochondrial heat shock protein 70-1 mitochondrial heat shock protein
70-1		 0.76 0.33 -0.31
56 AT4G01810 Sec23/Sec24 protein transport family protein 0.76 0.31 -0.32
57 AT2G03890 phosphoinositide 4-kinase gamma 7 phosphoinositide 4-kinase gamma 7,
phosphoinositide 4-kinase gamma 7,
UBIQUITIN-LIKE DOMAIN KINASE GAMMA
7		 -0.76 0.31 -0.3
58 AT4G23470 PLAC8 family protein 0.76 0.32 -0.34
59 AT5G63700 zinc ion binding;DNA binding -0.76 0.31 -0.32
60 AT3G62400 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.75 0.3 -0.32
61 AT3G18760 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.75 0.34 -0.29
62 AT5G26910 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G58650.1); Has 1322 Blast hits
to 684 proteins in 162 species: Archae - 4; Bacteria - 497;
Metazoa - 157; Fungi - 101; Plants - 155; Viruses - 0;
Other Eukaryotes - 408 (source: NCBI BLink).		 -0.75 0.33 -0.29
63 AT4G39880 Ribosomal protein L23/L15e family protein 0.75 0.32 -0.31
64 AT3G01800 Ribosome recycling factor 0.75 0.33 -0.32
65 AT4G11150 vacuolar ATP synthase subunit E1 embryo defective 2448, vacuolar
ATP synthase subunit E1, TUFF,
VHA-E1		 0.75 0.31 -0.31
66 AT4G19170 nine-cis-epoxycarotenoid dioxygenase 4 carotenoid cleavage dioxygenase 4,
nine-cis-epoxycarotenoid
dioxygenase 4		 -0.75 0.3 -0.31
67 AT4G23010 UDP-galactose transporter 2 ATUTR2, UDP-galactose transporter
2		 0.75 0.31 -0.33
68 AT2G17790 VPS35 homolog A VPS35 homolog A, ZIG suppressor 3 0.74 0.31 -0.31
69 AT4G12340 copper ion binding 0.74 0.33 -0.31
70 AT2G04040 MATE efflux family protein ATDTX1, detoxification 1, TX1 0.74 0.31 -0.29
71 AT1G09100 26S proteasome AAA-ATPase subunit RPT5B 26S proteasome AAA-ATPase subunit
RPT5B		 0.74 0.3 -0.34
72 AT4G21850 methionine sulfoxide reductase B9 methionine sulfoxide reductase B9,
methionine sulfoxide reductase B9		 0.74 0.31 -0.3
73 AT5G09470 dicarboxylate carrier 3 dicarboxylate carrier 3 0.74 0.31 -0.3
74 AT2G17720 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 prolyl 4-hydroxylase 5 0.74 0.31 -0.3
75 AT3G62810 complex 1 family protein / LVR family protein 0.74 0.33 -0.31
76 AT3G51460 Phosphoinositide phosphatase family protein ROOT HAIR DEFECTIVE4 0.74 0.32 -0.32
77 AT3G13930 Dihydrolipoamide acetyltransferase, long form protein 0.74 0.3 -0.33
78 AT2G29530 Tim10/DDP family zinc finger protein TIM10 0.73 0.32 -0.34
79 AT4G29480 Mitochondrial ATP synthase subunit G protein 0.73 0.3 -0.32
80 AT1G30630 Coatomer epsilon subunit 0.73 0.34 -0.31
81 AT3G25670 Leucine-rich repeat (LRR) family protein -0.73 0.3 -0.32
82 AT1G15860 Domain of unknown function (DUF298) 0.73 0.33 -0.33
83 AT1G49500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G19030.1); Has 24 Blast hits to 24 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.73 0.31 -0.31
84 AT2G34160 Alba DNA/RNA-binding protein 0.73 0.31 -0.31
85 AT3G07310 Protein of unknown function (DUF760) -0.73 0.34 -0.32
86 AT5G06120 ARM repeat superfamily protein 0.73 0.31 -0.3
87 AT5G40530 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.73 0.32 -0.31
88 AT1G18670 Protein kinase superfamily protein IMPAIRED IN BABA-INDUCED STERILITY
1		 -0.73 0.31 -0.31
89 AT1G15120 Ubiquinol-cytochrome C reductase hinge protein 0.73 0.32 -0.34
90 AT5G47320 ribosomal protein S19 ribosomal protein S19 0.73 0.32 -0.33
91 AT4G29350 profilin 2 profilin 2, PROFILIN 2, PROFILIN 2 0.72 0.31 -0.28
92 AT1G28210 DNAJ heat shock family protein ATJ1 0.72 0.32 -0.31
93 AT3G47836 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.72 0.31 -0.33
94 AT3G10050 L-O-methylthreonine resistant 1 L-O-methylthreonine resistant 1 0.72 0.3 -0.31
95 AT1G30890 Integral membrane HRF1 family protein 0.72 0.32 -0.31
96 AT3G54620 basic leucine zipper 25 ARABIDOPSIS THALIANA BASIC LEUCINE
ZIPPER 25, basic leucine zipper
25, BASIC LEUCINE ZIPPER O2
HOMOLOG 4		 0.72 0.31 -0.33
97 AT3G60450 Phosphoglycerate mutase family protein 0.72 0.31 -0.29
98 AT1G70770 Protein of unknown function DUF2359, transmembrane 0.72 0.32 -0.32
99 AT1G60590 Pectin lyase-like superfamily protein -0.72 0.3 -0.32
100 AT1G51350 ARM repeat superfamily protein 0.72 0.3 -0.31
101 AT1G79460 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 ARABIDOPSIS THALIANA ENT-KAURENE
SYNTHASE, ARABIDOPSIS THALIANA
ENT-KAURENE SYNTHASE 1, GA
REQUIRING 2, KS, ENT-KAURENE
SYNTHASE 1		 -0.72 0.35 -0.33
102 AT1G20030 Pathogenesis-related thaumatin superfamily protein -0.72 0.31 -0.31
103 AT5G13500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G25265.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.72 0.3 -0.31
104 AT1G18810 phytochrome kinase substrate-related -0.72 0.3 -0.32
105 AT1G56220 Dormancy/auxin associated family protein -0.72 0.31 -0.28
106 AT1G49430 long-chain acyl-CoA synthetase 2 long-chain acyl-CoA synthetase 2,
LATERAL ROOT DEVELOPMENT 2		 -0.71 0.31 -0.3
107 AT3G16520 UDP-glucosyl transferase 88A1 UDP-glucosyl transferase 88A1 -0.71 0.31 -0.33
108 AT5G54980 Uncharacterised protein family (UPF0497) -0.71 0.31 -0.31
109 AT4G04630 Protein of unknown function, DUF584 -0.71 0.32 -0.32
110 AT2G19810 CCCH-type zinc finger family protein AtOZF1, Oxidation-related Zinc
Finger 1		 -0.71 0.29 -0.33
111 AT1G64380 Integrase-type DNA-binding superfamily protein -0.71 0.31 -0.3
112 AT4G00755 F-box family protein -0.7 0.31 -0.28
113 AT1G77210 sugar transporter 14 sugar transport protein 14, sugar
transport protein 14		 -0.7 0.32 -0.31
114 AT1G76110 HMG (high mobility group) box protein with ARID/BRIGHT
DNA-binding domain		 -0.7 0.31 -0.3
115 AT1G80630 RNI-like superfamily protein -0.69 0.3 -0.3
116 AT1G03070 Bax inhibitor-1 family protein -0.69 0.32 -0.33
117 AT3G44610 Protein kinase superfamily protein -0.69 0.31 -0.29
118 AT3G62550 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.69 0.32 -0.3
119 AT1G06110 SKP1/ASK-interacting protein 16 SKP1/ASK-interacting protein 16 -0.69 0.32 -0.31
120 AT5G56100 glycine-rich protein / oleosin -0.68 0.31 -0.31
121 AT2G16390 SNF2 domain-containing protein / helicase domain-containing
protein		 CHR35, DEFECTIVE IN MERISTEM
SILENCING 1, DEFECTIVE IN
RNA-DIRECTED DNA METHYLATION 1		 -0.68 0.31 -0.33
122 AT2G47700 RING/U-box superfamily protein RED AND FAR-RED INSENSITIVE 2 -0.68 0.3 -0.31
123 AT1G68220 Protein of unknown function (DUF1218) -0.67 0.3 -0.3
124 AT4G24800 MA3 domain-containing protein EIN2 C-terminus Interacting
Protein 1		 -0.67 0.32 -0.3
125 AT4G23880 unknown protein; Has 73 Blast hits to 69 proteins in 22
species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 2;
Plants - 18; Viruses - 0; Other Eukaryotes - 40 (source:
NCBI BLink).		 -0.67 0.32 -0.32
126 AT1G01250 Integrase-type DNA-binding superfamily protein -0.67 0.32 -0.32
127 AT4G19865 Galactose oxidase/kelch repeat superfamily protein -0.67 0.3 -0.32
128 AT2G31290 Ubiquitin carboxyl-terminal hydrolase family protein -0.67 0.33 -0.32
129 AT3G60220 TOXICOS EN LEVADURA 4 TOXICOS EN LEVADURA 4, TOXICOS EN
LEVADURA 4		 -0.66 0.3 -0.32
130 AT4G35560 Transducin/WD40 repeat-like superfamily protein DUO1-activated WD40 1 -0.66 0.32 -0.3
131 AT2G29380 highly ABA-induced PP2C gene 3 highly ABA-induced PP2C gene 3 -0.66 0.33 -0.3
132 AT3G06520 agenet domain-containing protein -0.66 0.32 -0.32
133 AT4G27530 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G53895.1); Has 14 Blast hits
to 14 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.31 -0.31
134 AT5G48490 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.65 0.32 -0.31
135 AT5G26010 Protein phosphatase 2C family protein -0.65 0.3 -0.3
136 AT5G45950 GDSL-like Lipase/Acylhydrolase superfamily protein -0.65 0.31 -0.33
137 AT3G10200 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.65 0.33 -0.3
138 AT1G13650 BEST Arabidopsis thaliana protein match is: 18S
pre-ribosomal assembly protein gar2-related
(TAIR:AT2G03810.4); Has 3688 Blast hits to 1629 proteins in
255 species: Archae - 22; Bacteria - 222; Metazoa - 684;
Fungi - 292; Plants - 62; Viruses - 14; Other Eukaryotes -
2392 (source: NCBI BLink).		 -0.65 0.32 -0.33
139 AT5G67420 LOB domain-containing protein 37 ASYMMETRIC LEAVES2-LIKE 39, LOB
domain-containing protein 37		 -0.65 0.3 -0.3
140 AT5G49120 Protein of unknown function (DUF581) -0.65 0.31 -0.29
141 AT5G25610 BURP domain-containing protein ATRD22, RESPONSIVE TO DESSICATION
22		 -0.65 0.32 -0.31
142 AT4G13810 receptor like protein 47 receptor like protein 47, receptor
like protein 47		 -0.65 0.32 -0.31
143 AT5G18210 NAD(P)-binding Rossmann-fold superfamily protein -0.65 0.3 -0.33
144 AT1G72310 RING/U-box superfamily protein ATL3 -0.64 0.3 -0.31
145 AT1G76900 tubby like protein 1 tubby like protein 1, tubby like
protein 1		 -0.64 0.33 -0.34
146 AT5G51080 RNase H family protein -0.64 0.31 -0.33
147 AT1G23000 Heavy metal transport/detoxification superfamily protein -0.64 0.32 -0.33
148 AT5G10550 global transcription factor group E2 global transcription factor group
E2		 -0.64 0.32 -0.32
149 AT5G24490 30S ribosomal protein, putative -0.64 0.32 -0.35
150 AT2G42290 Leucine-rich repeat protein kinase family protein -0.64 0.33 -0.33
151 AT1G69230 SPIRAL1-like2 SPIRAL1-like2 -0.63 0.32 -0.32
152 AT1G19970 ER lumen protein retaining receptor family protein -0.63 0.33 -0.32
153 AT4G22190 unknown protein; Has 283 Blast hits to 154 proteins in 44
species: Archae - 0; Bacteria - 2; Metazoa - 24; Fungi -
12; Plants - 48; Viruses - 0; Other Eukaryotes - 197
(source: NCBI BLink).		 -0.63 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
154 C0263 UMP - UMP pyrimidine salvage pathway,
dolichyl-diphosphooligosaccharide biosynthesis,
lipid IVA biosynthesis,
uridine-5'-phosphate biosynthesis,
pyrimidine ribonucleotides interconversion 		-0.82 0.46 -0.46 C0263