AT4G29660 : EMBRYO DEFECTIVE 2752
Query Information
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AGICode AT4G29660
Description embryo defective 2752
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G29660 embryo defective 2752 EMBRYO DEFECTIVE 2752 1 0.34 -0.33
2 AT4G00585 unknown protein; Has 47 Blast hits to 47 proteins in 22
species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 7;
Plants - 33; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.84 0.3 -0.32
3 AT5G16060 Cytochrome c oxidase biogenesis protein Cmc1-like 0.8 0.32 -0.33
4 AT1G27435 unknown protein; Has 16 Blast hits to 16 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.8 0.3 -0.33
5 AT3G62810 complex 1 family protein / LVR family protein 0.79 0.31 -0.34
6 AT5G61220 LYR family of Fe/S cluster biogenesis protein 0.76 0.33 -0.31
7 AT1G79390 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.75 0.29 -0.34
8 AT1G16000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G80890.1); Has 41 Blast hits
to 40 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.75 0.31 -0.31
9 AT5G44030 cellulose synthase A4 cellulose synthase A4, IRREGULAR
XYLEM 5, NWS2		 -0.74 0.33 -0.32
10 AT4G37660 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 0.74 0.31 -0.32
11 AT4G29480 Mitochondrial ATP synthase subunit G protein 0.73 0.32 -0.32
12 AT3G05070 CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18
(InterPro:IPR013169); Has 292 Blast hits to 292 proteins in
153 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi
- 83; Plants - 38; Viruses - 11; Other Eukaryotes - 42
(source: NCBI BLink).		 0.73 0.32 -0.29
13 AT2G45790 phosphomannomutase PHOSPHOMANNOMUTASE,
phosphomannomutase		 0.73 0.31 -0.33
14 AT1G15120 Ubiquinol-cytochrome C reductase hinge protein 0.73 0.31 -0.32
15 AT1G19130 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF985 (InterPro:IPR009327), RmlC-like jelly roll fold
(InterPro:IPR014710); Has 1465 Blast hits to 1465 proteins
in 584 species: Archae - 10; Bacteria - 1038; Metazoa - 19;
Fungi - 43; Plants - 51; Viruses - 0; Other Eukaryotes -
304 (source: NCBI BLink).		 0.73 0.31 -0.31
16 AT1G67350 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.72 0.31 -0.3
17 AT1G73570 HCP-like superfamily protein -0.72 0.31 -0.33
18 AT3G25670 Leucine-rich repeat (LRR) family protein -0.71 0.3 -0.32
19 AT3G03420 Ku70-binding family protein 0.71 0.34 -0.31
20 AT4G29735 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Uncharacterised protein family UPF0197
(InterPro:IPR007915); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.71 0.31 -0.34
21 AT5G12190 RNA-binding (RRM/RBD/RNP motifs) family protein 0.71 0.31 -0.29
22 AT1G26470 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
regulation of transcription; LOCATED IN: nucleus, H4/H2A
histone acetyltransferase complex; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: CT20 (InterPro:IPR012423); Has 60 Blast
hits to 60 proteins in 27 species: Archae - 0; Bacteria -
0; Metazoa - 26; Fungi - 2; Plants - 30; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.7 0.31 -0.35
23 AT5G46030 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF701, zinc-binding putative
(InterPro:IPR007808); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.7 0.33 -0.35
24 AT5G17420 Cellulose synthase family protein ATCESA7, CELLULOSE SYNTHASE
CATALYTIC SUBUNIT 7, IRREGULAR
XYLEM 3, MURUS 10		 -0.7 0.3 -0.32
25 AT1G53530 Peptidase S24/S26A/S26B/S26C family protein 0.7 0.32 -0.31
26 AT5G16470 zinc finger (C2H2 type) family protein 0.7 0.33 -0.34
27 AT5G13070 MSF1-like family protein 0.7 0.31 -0.33
28 AT5G63000 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 0.7 0.31 -0.32
29 AT4G30010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 26 plant structures;
EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39
proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.69 0.31 -0.33
30 AT3G20920 translocation protein-related 0.68 0.33 -0.32
31 AT2G44270 repressor of lrx1 repressor of lrx1 0.68 0.32 -0.3
32 AT5G66510 gamma carbonic anhydrase 3 gamma carbonic anhydrase 3 0.68 0.28 -0.33
33 AT1G25275 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 18 Blast hits to 18 proteins
in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.68 0.33 -0.32
34 AT4G10180 light-mediated development protein 1 / deetiolated1 (DET1) ATDET1, DE-ETIOLATED 1, FUSCA 2 -0.68 0.31 -0.32
35 AT3G58180 ARM repeat superfamily protein 0.68 0.3 -0.32
36 AT5G20050 Protein kinase superfamily protein 0.67 0.33 -0.32
37 AT2G44065 Ribosomal protein L2 family 0.67 0.31 -0.32
38 AT1G49820 S-methyl-5-thioribose kinase S-methyl-5-thioribose kinase,
S-methyl-5-thioribose kinase,
5-methylthioribose kinase 1		 0.67 0.32 -0.34
39 AT1G23820 spermidine synthase 1 spermidine synthase 1 0.67 0.31 -0.29
40 AT1G58100 TCP family transcription factor TCP domain protein 8 0.67 0.3 -0.34
41 AT2G18250 4-phosphopantetheine adenylyltransferase 4-phosphopantetheine
adenylyltransferase,
4-phosphopantetheine
adenylyltransferase		 0.66 0.29 -0.32
42 AT1G80860 phospholipid N-methyltransferase ARABIDOPSIS PHOSPHOLIPID
N-METHYLTRANSFERASE, phospholipid
N-methyltransferase		 0.66 0.32 -0.32
43 AT5G44670 Domain of unknown function (DUF23) -0.66 0.32 -0.33
44 AT1G07960 PDI-like 5-1 PDI-like 5-1, PDI-like 5-1 0.66 0.31 -0.31
45 AT5G53560 cytochrome B5 isoform E ATB5-A, ARABIDOPSIS CYTOCHROME B5
ISOFORM E, B5 #2, cytochrome B5
isoform E		 0.66 0.3 -0.32
46 AT3G20150 Kinesin motor family protein -0.65 0.29 -0.32
47 AT2G30000 PHF5-like protein 0.65 0.34 -0.32
48 AT5G20270 heptahelical transmembrane protein1 heptahelical transmembrane
protein1		 -0.65 0.31 -0.32
49 AT3G45680 Major facilitator superfamily protein -0.65 0.3 -0.31
50 AT1G22060 LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: FBD, F-box and Leucine Rich
Repeat domains containing protein (TAIR:AT1G22000.1); Has
84739 Blast hits to 38714 proteins in 2257 species: Archae
- 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706;
Plants - 4675; Viruses - 308; Other Eukaryotes - 18553
(source: NCBI BLink).		 -0.65 0.3 -0.3
51 AT1G19835 Plant protein of unknown function (DUF869) -0.65 0.34 -0.31
52 AT4G14410 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 basic Helix-Loop-Helix 104 0.65 0.3 -0.33
53 AT5G14800 pyrroline-5- carboxylate (P5C) reductase AT-P5C1, PYRROLINE-5- CARBOXYLATE
(P5C) REDUCTASE, EMBRYO DEFECTIVE
2772, pyrroline-5- carboxylate
(P5C) reductase		 0.65 0.33 -0.29
54 AT2G43800 Actin-binding FH2 (formin homology 2) family protein -0.65 0.31 -0.33
55 AT4G14615 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2346
(InterPro:IPR018625); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G52825.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.64 0.3 -0.31
56 AT5G39910 Pectin lyase-like superfamily protein -0.64 0.31 -0.29
57 AT4G27270 Quinone reductase family protein 0.64 0.29 -0.3
58 AT2G18390 ADP-ribosylation factor family protein ARF-LIKE 2, ATARLC1, HALLIMASCH,
TITAN 5		 0.64 0.31 -0.28
59 AT3G61670 Protein of unknown function (DUF3133) -0.64 0.3 -0.31
60 AT5G58220 transthyretin-like protein allantoin synthase,
transthyretin-like protein		 0.64 0.32 -0.29
61 AT1G17510 unknown protein; Has 11 Blast hits to 11 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.64 0.3 -0.3
62 AT5G44180 Homeodomain-like transcriptional regulator -0.63 0.34 -0.32
63 AT1G51650 ATP synthase epsilon chain, mitochondrial 0.63 0.34 -0.3
64 AT1G05180 NAD(P)-binding Rossmann-fold superfamily protein AUXIN RESISTANT 1 0.63 0.29 -0.33
65 AT1G17860 Kunitz family trypsin and protease inhibitor protein 0.63 0.29 -0.31
66 ATCG00800 structural constituent of ribosome -0.63 0.3 -0.3
67 AT4G14150 phragmoplast-associated kinesin-related protein 1 KINESIN-12A,
phragmoplast-associated
kinesin-related protein 1		 -0.63 0.34 -0.31
68 AT5G37180 sucrose synthase 5 ARABIDOPSIS THALIANA SUCROSE
SYNTHASE 5, sucrose synthase 5		 -0.62 0.32 -0.32
69 AT2G42210 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 ATOEP16-3, OEP16-3 0.62 0.29 -0.31
70 AT3G63300 FORKED 1 FORKED 1 -0.62 0.31 -0.3
71 AT2G35110 transcription activators GNARLED, NCK-ASSOCIATED PROTEIN 1,
NAPP		 -0.62 0.32 -0.32
72 AT4G14760 kinase interacting (KIP1-like) family protein -0.62 0.32 -0.31
73 AT1G10640 Pectin lyase-like superfamily protein -0.61 0.3 -0.31
74 AT2G04850 Auxin-responsive family protein -0.61 0.31 -0.32
75 AT1G30440 Phototropic-responsive NPH3 family protein -0.61 0.29 -0.31
76 AT1G01900 subtilase family protein ATSBT1.1, SBTI1.1 -0.61 0.34 -0.31
77 AT2G27740 Family of unknown function (DUF662) -0.61 0.32 -0.31
78 AT3G50780 BEST Arabidopsis thaliana protein match is: BTB/POZ
domain-containing protein (TAIR:AT1G63850.1); Has 298 Blast
hits to 298 proteins in 22 species: Archae - 0; Bacteria -
0; Metazoa - 10; Fungi - 0; Plants - 287; Viruses - 0;
Other Eukaryotes - 1 (source: NCBI BLink).		 -0.6 0.31 -0.31
79 AT1G15180 MATE efflux family protein -0.6 0.32 -0.32
80 AT1G15940 Tudor/PWWP/MBT superfamily protein -0.6 0.32 -0.33
81 AT4G26540 Leucine-rich repeat receptor-like protein kinase family
protein		 -0.6 0.32 -0.32
82 ATCG00810 ribosomal protein L22 ribosomal protein L22 -0.6 0.31 -0.32
83 AT2G29650 phosphate transporter 4;1 anion transporter 1, phosphate
transporter 4;1		 -0.59 0.29 -0.32
84 AT1G55970 histone acetyltransferase of the CBP family 4 HAC04, histone acetyltransferase
of the CBP family 4, HISTONE
ACETYLTRANSFERASE OF THE CBP
FAMILY 6, HISTONE
ACETYLTRANSFERASE OF THE GNAT/MYST
SUPERFAMILY 04, HISTONE
ACETYLTRANSFERASE OF THE GNAT/MYST
SUPERFAMILY 4		 -0.59 0.31 -0.3
85 AT3G14980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 -0.58 0.32 -0.3
86 AT4G12700 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G04280.1); Has 136 Blast hits
to 136 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other
Eukaryotes - 11 (source: NCBI BLink).		 -0.58 0.31 -0.31
87 AT1G47890 receptor like protein 7 receptor like protein 7, receptor
like protein 7		 -0.58 0.32 -0.32
88 ATCG00340 Photosystem I, PsaA/PsaB protein PSAB -0.58 0.3 -0.3
89 AT1G80930 MIF4G domain-containing protein / MA3 domain-containing
protein		 -0.58 0.32 -0.31
90 AT1G27190 Leucine-rich repeat protein kinase family protein -0.57 0.3 -0.32
91 AT5G64090 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Hyccin
(InterPro:IPR018619); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G21050.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.57 0.34 -0.34
92 AT1G05630 Endonuclease/exonuclease/phosphatase family protein 5PTASE13, AT5PTASE13 -0.57 0.31 -0.32
93 AT3G01670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G01680.1); Has 121 Blast hits
to 111 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 sieve element occlusion a -0.57 0.3 -0.31
94 AT1G27850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G40070.1); Has 9215
Blast hits to 5316 proteins in 473 species: Archae - 6;
Bacteria - 773; Metazoa - 3392; Fungi - 1710; Plants - 539;
Viruses - 143; Other Eukaryotes - 2652 (source: NCBI
BLink).		 -0.57 0.34 -0.33
95 AT3G20400 F-box associated ubiquitination effector family protein EMBRYO DEFECTIVE 2743 -0.57 0.34 -0.31
96 AT1G67140 HEAT repeat-containing protein SWEETIE -0.56 0.3 -0.33
97 AT1G05460 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 SILENCING DEFECTIVE -0.56 0.33 -0.29
98 ATCG00710 photosystem II reaction center protein H photosystem II reaction center
protein H		 -0.56 0.33 -0.3
99 AT1G31810 Formin Homology 14 Formin Homology 14 -0.56 0.29 -0.31
100 AT1G08600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATRX, CHR20 -0.56 0.33 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
101 C0266 Xylose D-Xylose D-Xylose xylose degradation I -0.9 0.45 -0.47 C0266
102 C0063 Campesterol - Campesterol brassinosteroid biosynthesis I,
brassinosteroid biosynthesis II,
plant sterol biosynthesis,
brassinosteroid biosynthesis III 		-0.74 0.45 -0.42 C0063
103 C0248 Sulfoquinovosyldiacylglycerol-36:3 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.65 0.46 -0.49 C0248
104 C0251 Sulfoquinovosyldiacylglycerol-36:6 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.65 0.5 -0.51 C0251
105 C0249 Sulfoquinovosyldiacylglycerol-36:4 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.57 0.33 -0.33 C0249