AT4G29160 : SNF7.1
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G29160
Description SNF7 family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G29160 SNF7 family protein SNF7.1 1 0.31 -0.33
2 AT1G33490 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2062 (InterPro:IPR018639); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G10140.1); Has 88 Blast hits to 88 proteins in 29
species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0;
Plants - 54; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.88 0.32 -0.31
3 AT5G07470 peptidemethionine sulfoxide reductase 3 ARABIDOPSIS THALIANA METHIONINE
SULFOXIDE REDUCTASE 3,
peptidemethionine sulfoxide
reductase 3		 0.87 0.35 -0.32
4 AT3G23490 cyanase cyanase 0.86 0.33 -0.3
5 AT2G05630 Ubiquitin-like superfamily protein ATG8D 0.86 0.32 -0.33
6 AT1G32790 CTC-interacting domain 11 CTC-interacting domain 11 0.85 0.33 -0.32
7 AT2G33150 peroxisomal 3-ketoacyl-CoA thiolase 3 3-KETOACYL-COA THIOLASE 2,
PEROXISOME DEFECTIVE 1,
peroxisomal 3-ketoacyl-CoA
thiolase 3		 0.85 0.3 -0.31
8 AT5G04750 F1F0-ATPase inhibitor protein, putative 0.84 0.3 -0.31
9 AT3G51130 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0183
(InterPro:IPR005373); Has 269 Blast hits to 265 proteins in
123 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi
- 82; Plants - 37; Viruses - 0; Other Eukaryotes - 19
(source: NCBI BLink).		 0.83 0.33 -0.32
10 AT5G41210 glutathione S-transferase THETA 1 glutathione S-transferase THETA 1,
GST10, glutathione S-transferase
THETA 1		 0.83 0.32 -0.28
11 AT1G16180 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 0.83 0.31 -0.3
12 AT1G02305 Cysteine proteinases superfamily protein 0.82 0.3 -0.33
13 AT4G13360 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 0.82 0.32 -0.31
14 AT1G50940 electron transfer flavoprotein alpha electron transfer flavoprotein
alpha		 0.82 0.32 -0.32
15 AT4G20330 Transcription initiation factor TFIIE, beta subunit 0.82 0.36 -0.33
16 AT5G61640 peptidemethionine sulfoxide reductase 1 ARABIDOPSIS THALIANA METHIONINE
SULFOXIDE REDUCTASE A1,
peptidemethionine sulfoxide
reductase 1		 0.82 0.32 -0.32
17 AT5G65860 ankyrin repeat family protein -0.82 0.32 -0.3
18 AT4G29490 Metallopeptidase M24 family protein 0.82 0.34 -0.29
19 AT3G53970 proteasome inhibitor-related 0.81 0.32 -0.31
20 AT5G56180 actin-related protein 8 ARP8, actin-related protein 8,
actin-related protein 8		 0.81 0.32 -0.32
21 AT5G41350 RING/U-box superfamily protein 0.81 0.31 -0.3
22 AT3G14730 Pentatricopeptide repeat (PPR) superfamily protein -0.81 0.33 -0.3
23 AT3G51730 saposin B domain-containing protein 0.81 0.29 -0.31
24 AT3G54300 vesicle-associated membrane protein 727 vesicle-associated membrane
protein 727, VAMP727,
vesicle-associated membrane
protein 727		 0.81 0.32 -0.31
25 AT1G10500 chloroplast-localized ISCA-like protein chloroplast-localized ISCA-like
protein, chloroplast-localized
ISCA-like protein		 0.81 0.32 -0.32
26 AT1G45150 unknown protein; Has 219 Blast hits to 202 proteins in 78
species: Archae - 0; Bacteria - 166; Metazoa - 0; Fungi -
0; Plants - 36; Viruses - 0; Other Eukaryotes - 17 (source:
NCBI BLink).		 0.81 0.31 -0.3
27 AT1G27530 CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating
enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-fold
modifier-conjugating enzyme 1 (InterPro:IPR014806); Has 269
Blast hits to 269 proteins in 110 species: Archae - 0;
Bacteria - 0; Metazoa - 175; Fungi - 0; Plants - 42;
Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).		 0.81 0.28 -0.32
28 AT3G15580 Ubiquitin-like superfamily protein AUTOPHAGY 8H, AUTOPHAGY 8I 0.81 0.31 -0.31
29 AT5G45130 RAB homolog 1 ARABIDOPSIS RAB HOMOLOG F2A,
ATRAB5A, ATRABF2A, RAB HOMOLOG
F2A, RAB5A, RABF2A, RAB homolog 1		 0.81 0.31 -0.31
30 AT4G35360 Uncharacterised conserved protein (UCP030210) 0.8 0.35 -0.3
31 AT4G13270 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.8 0.31 -0.34
32 AT3G47810 Calcineurin-like metallo-phosphoesterase superfamily
protein		 ATVPS29, MAIGO 1, VACUOLAR PROTEIN
SORTING 29		 0.8 0.32 -0.32
33 AT5G43280 delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 delta(3,5),delta(2,4)-dienoyl-CoA
isomerase 1,
delta(3,5),delta(2,4)-dienoyl-CoA
isomerase 1,
DELTA(3,5),DELTA(2,4)-DIENOYL-COA
ISOMERASE 1		 0.8 0.3 -0.33
34 AT1G79590 syntaxin of plants 52 ATSYP52, syntaxin of plants 52 0.8 0.32 -0.33
35 AT5G61530 small G protein family protein / RhoGAP family protein 0.8 0.31 -0.33
36 AT1G09430 ATP-citrate lyase A-3 ATP-citrate lyase A-3 0.8 0.3 -0.32
37 AT5G59890 actin depolymerizing factor 4 actin depolymerizing factor 4,
ATADF4		 0.8 0.3 -0.31
38 AT3G61200 Thioesterase superfamily protein 0.8 0.3 -0.33
39 AT5G06370 NC domain-containing protein-related 0.8 0.33 -0.32
40 AT3G53940 Mitochondrial substrate carrier family protein -0.79 0.33 -0.29
41 AT1G47128 Granulin repeat cysteine protease family protein responsive to dehydration 21,
RESPONSIVE TO DEHYDRATION 21A		 0.79 0.3 -0.33
42 AT1G29970 60S ribosomal protein L18A-1 60S ribosomal protein L18A-1 0.78 0.33 -0.31
43 AT3G59670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G37440.2); Has 77 Blast hits
to 77 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 -0.78 0.3 -0.3
44 AT3G18820 RAB GTPase homolog G3F RAB GTPase homolog G3F, ATRABG3F,
RAB71, RAB7B, RAB GTPase homolog
G3F, RABG3F		 0.78 0.31 -0.31
45 AT1G77710 CONTAINS InterPro DOMAIN/s: Ubiquitin-like, Ufm1
(InterPro:IPR005375); Has 244 Blast hits to 244 proteins in
106 species: Archae - 0; Bacteria - 0; Metazoa - 149; Fungi
- 0; Plants - 47; Viruses - 0; Other Eukaryotes - 48
(source: NCBI BLink).		 0.78 0.32 -0.32
46 AT3G02150 plastid transcription factor 1 plastid transcription factor 1,
TEOSINTE BRANCHED1, CYCLOIDEA AND
PCF TRANSCRIPTION FACTOR 13, TFPD		 0.78 0.32 -0.33
47 AT1G06800 alpha/beta-Hydrolases superfamily protein phospholipase A I gamma 1 0.78 0.33 -0.32
48 AT5G60620 glycerol-3-phosphate acyltransferase 9 glycerol-3-phosphate
acyltransferase 9		 0.78 0.32 -0.29
49 AT3G54380 SAC3/GANP/Nin1/mts3/eIF-3 p25 family AtSAC3C, yeast Sac3 homolog C 0.78 0.34 -0.32
50 AT4G29420 F-box/RNI-like superfamily protein 0.78 0.3 -0.33
51 AT2G36330 Uncharacterised protein family (UPF0497) 0.78 0.31 -0.32
52 AT3G15290 3-hydroxyacyl-CoA dehydrogenase family protein 0.78 0.34 -0.33
53 AT3G54840 Ras-related small GTP-binding family protein ARA-6, ARA6, ATRAB5C, ATRABF1,
RABF1		 0.78 0.31 -0.3
54 AT1G18720 Protein of unknown function (DUF962) 0.78 0.32 -0.3
55 AT5G59140 BTB/POZ domain-containing protein 0.77 0.32 -0.3
56 AT5G48180 nitrile specifier protein 5 nitrile specifier protein 5 0.77 0.34 -0.32
57 AT4G20410 gamma-soluble NSF attachment protein GAMMA-SOLUBLE NSF ATTACHMENT
PROTEIN, gamma-soluble NSF
attachment protein		 0.77 0.29 -0.33
58 AT1G69410 eukaryotic elongation factor 5A-3 EUKARYOTIC ELONGATION FACTOR 5A-3,
eukaryotic elongation factor 5A-3		 0.77 0.34 -0.31
59 AT2G46080 CONTAINS InterPro DOMAIN/s: Protein BYPASS related
(InterPro:IPR008511); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF793)
(TAIR:AT1G01550.2); Has 153 Blast hits to 139 proteins in
20 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi -
0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.77 0.32 -0.3
60 AT2G35010 thioredoxin O1 thioredoxin O1, thioredoxin O1 0.77 0.3 -0.35
61 AT2G23090 Uncharacterised protein family SERF 0.77 0.31 -0.3
62 AT1G45976 S-ribonuclease binding protein 1 S-ribonuclease binding protein 1 0.77 0.3 -0.32
63 AT1G06570 phytoene desaturation 1 4-hydroxyphenylpyruvate
dioxygenase,
4-hydroxyphenylpyruvate
dioxygenase, phytoene desaturation
1		 0.77 0.31 -0.33
64 AT1G01800 NAD(P)-binding Rossmann-fold superfamily protein 0.77 0.3 -0.31
65 AT1G06130 glyoxalase 2-4 glyoxalase 2-4 0.77 0.3 -0.3
66 AT5G58740 HSP20-like chaperones superfamily protein 0.77 0.32 -0.31
67 AT2G19200 unknown protein -0.76 0.31 -0.31
68 AT4G05530 indole-3-butyric acid response 1 indole-3-butyric acid response 1,
SHORT-CHAIN
DEHYDROGENASE/REDUCTASE A		 0.76 0.31 -0.28
69 AT5G54110 membrane-associated mannitol-induced membrane-associated
mannitol-induced,
membrane-associated
mannitol-induced		 0.76 0.3 -0.3
70 AT5G21090 Leucine-rich repeat (LRR) family protein 0.76 0.31 -0.32
71 AT2G31320 poly(ADP-ribose) polymerase 2 ATPARP2, poly(ADP-ribose)
polymerase 2		 -0.76 0.33 -0.3
72 AT3G20260 Protein of unknown function (DUF1666) -0.76 0.31 -0.32
73 AT3G09085 Protein of unknown function (DUF962) 0.76 0.3 -0.33
74 AT3G50360 centrin2 centrin2, CENTRIN 1, centrin2 0.76 0.34 -0.31
75 AT3G23605 Ubiquitin-like superfamily protein 0.76 0.3 -0.34
76 AT1G63480 AT hook motif DNA-binding family protein -0.76 0.32 -0.31
77 AT5G56180 actin-related protein 8 ARP8, actin-related protein 8,
actin-related protein 8		 0.76 0.31 -0.31
78 AT2G31800 Integrin-linked protein kinase family 0.76 0.33 -0.31
79 AT5G65940 beta-hydroxyisobutyryl-CoA hydrolase 1 beta-hydroxyisobutyryl-CoA
hydrolase 1		 0.76 0.33 -0.32
80 AT3G55140 Pectin lyase-like superfamily protein 0.76 0.32 -0.3
81 AT1G16840 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits
to 71 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.76 0.32 -0.32
82 AT5G39730 AIG2-like (avirulence induced gene) family protein 0.76 0.31 -0.32
83 AT3G27000 actin related protein 2 actin related protein 2, ACTIN
RELATED PROTEIN 2, WURM		 0.76 0.32 -0.3
84 AT1G06400 Ras-related small GTP-binding family protein ARA-2, ARA2, ATRAB11E, ARABIDOPSIS
THALIANA RAB GTPASE HOMOLOG A1A		 0.76 0.32 -0.31
85 AT5G50820 NAC domain containing protein 97 NAC domain containing protein 97,
NAC domain containing protein 97		 -0.75 0.31 -0.3
86 AT5G63540 Domain of unknown function (DUF1767) ATRMI1, BLAP75, RECQ MEDIATED
INSTABILITY 1		 -0.74 0.32 -0.32
87 AT2G41820 Leucine-rich repeat protein kinase family protein -0.74 0.31 -0.3
88 AT1G50240 Protein kinase family protein with ARM repeat domain FUSED -0.74 0.31 -0.31
89 AT4G30700 Pentatricopeptide repeat (PPR) superfamily protein -0.73 0.35 -0.32
90 AT1G11280 S-locus lectin protein kinase family protein -0.73 0.32 -0.33
91 AT1G26540 Agenet domain-containing protein -0.73 0.3 -0.32
92 AT3G22780 Tesmin/TSO1-like CXC domain-containing protein ATTSO1, CHINESE FOR 'UGLY' -0.72 0.31 -0.32
93 AT5G06940 Leucine-rich repeat receptor-like protein kinase family
protein		 -0.71 0.31 -0.32
94 AT2G20710 Tetratricopeptide repeat (TPR)-like superfamily protein -0.71 0.29 -0.33
95 AT1G30600 Subtilase family protein -0.71 0.33 -0.33
96 AT5G34800 transposable element gene -0.71 0.31 -0.32
97 AT3G25950 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 -0.7 0.29 -0.33
98 AT2G28250 Protein kinase superfamily protein NCRK -0.7 0.31 -0.31
99 AT4G37490 CYCLIN B1;1 CYCLIN 1, CYCB1, CYCLIN B1;1 -0.7 0.3 -0.31
100 AT5G27910 nuclear factor Y, subunit C8 nuclear factor Y, subunit C8 -0.7 0.31 -0.32
101 AT1G73020 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF590 (InterPro:IPR007632); Has 1198
Blast hits to 1128 proteins in 154 species: Archae - 0;
Bacteria - 0; Metazoa - 809; Fungi - 158; Plants - 25;
Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink).		 -0.7 0.34 -0.33
102 AT1G17090 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 7 growth stages; Has 5 Blast
hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.29 -0.3
103 AT5G43020 Leucine-rich repeat protein kinase family protein -0.7 0.31 -0.31
104 AT1G49910 Transducin/WD40 repeat-like superfamily protein BUB (BUDDING UNINHIBITED BY
BENZYMIDAZOL) 3.2		 -0.7 0.35 -0.31
105 AT4G13990 Exostosin family protein -0.7 0.3 -0.31
106 AT1G27880 DEAD/DEAH box RNA helicase family protein -0.7 0.3 -0.3
107 AT4G25090 Riboflavin synthase-like superfamily protein -0.7 0.3 -0.28
108 AT4G37170 Pentatricopeptide repeat (PPR) superfamily protein -0.69 0.32 -0.33
109 AT3G10310 P-loop nucleoside triphosphate hydrolases superfamily
protein with CH (Calponin Homology) domain		 -0.69 0.31 -0.33
110 AT2G34150 SCAR family protein ATRANGAP2, ATSCAR1, SCAR1,
WISKOTT-ALDRICH SYNDROME PROTEIN
FAMILY VERPROLIN HOMOLOGOUS
PROTEIN 1		 -0.69 0.33 -0.34
111 AT1G76870 BEST Arabidopsis thaliana protein match is:
sequence-specific DNA binding transcription factors
(TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins in
76 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi
- 14; Plants - 127; Viruses - 0; Other Eukaryotes - 126
(source: NCBI BLink).		 -0.69 0.3 -0.29
112 AT3G24320 MUTL protein homolog 1 ATMSH1, CHLOROPLAST MUTATOR, CHM1,
MUTL protein homolog 1		 -0.69 0.3 -0.32
113 AT1G62085 Mitochondrial transcription termination factor family
protein		 -0.69 0.32 -0.33
114 AT3G16890 pentatricopeptide (PPR) domain protein 40 pentatricopeptide (PPR) domain
protein 40		 -0.68 0.31 -0.3
115 AT2G10390 transposable element gene -0.68 0.3 -0.31
116 AT4G16120 COBRA-like protein-7 precursor ARABIDOPSIS THALIANA SEC61 BETA 1,
COBRA-like protein-7 precursor,
SEC61 BETA 1		 -0.68 0.31 -0.33
117 AT3G56870 unknown protein; Has 204 Blast hits to 201 proteins in 58
species: Archae - 0; Bacteria - 10; Metazoa - 72; Fungi -
8; Plants - 41; Viruses - 0; Other Eukaryotes - 73 (source:
NCBI BLink).		 -0.67 0.32 -0.32
118 AT1G79220 Mitochondrial transcription termination factor family
protein		 -0.67 0.31 -0.33
119 AT1G04050 homolog of SU(var)3-9 1 SET DOMAIN PROTEIN 13, homolog of
SU(var)3-9 1		 -0.67 0.31 -0.3
120 AT4G18750 Pentatricopeptide repeat (PPR) superfamily protein DEFECTIVELY ORGANIZED TRIBUTARIES
4		 -0.67 0.31 -0.28
121 AT1G63300 Myosin heavy chain-related protein -0.67 0.33 -0.31
122 AT1G77720 putative protein kinase 1 putative protein kinase 1 -0.67 0.32 -0.32
123 AT2G24320 alpha/beta-Hydrolases superfamily protein -0.67 0.31 -0.32
124 AT2G41310 response regulator 3 RESPONSE REGULATOR 8, response
regulator 3, response regulator 3		 -0.66 0.31 -0.32
125 AT5G65450 ubiquitin-specific protease 17 ubiquitin-specific protease 17 -0.66 0.31 -0.31
126 AT3G13820 F-box and associated interaction domains-containing protein -0.66 0.3 -0.3
127 AT1G71420 Tetratricopeptide repeat (TPR)-like superfamily protein -0.66 0.31 -0.28
128 AT5G44850 Protein with RNI-like/FBD-like domains -0.66 0.34 -0.34
129 AT1G35730 pumilio 9 pumilio 9, pumilio 9 -0.66 0.31 -0.32
130 AT5G55650 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.66 0.31 -0.3
131 AT5G17960 Cysteine/Histidine-rich C1 domain family protein -0.66 0.31 -0.31
132 AT5G09860 nuclear matrix protein-related AtHPR1, AtTHO1, HPR1, THO1 -0.66 0.32 -0.33
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
133 C0016 S-Adenosylmethionine S-Adenosyl-L-methionine S-Adenosyl-L-methionine ethylene biosynthesis I (plants),
scopoletin biosynthesis,
quercetinsulphates biosynthesis,
siroheme biosynthesis,
gibberellin inactivation II (methylation),
suberin biosynthesis,
volatile benzenoid biosynthesis I (ester formation),
S-adenosyl-L-methionine cycle II,
methylhalides biosynthesis (plants),
S-methylmethionine cycle,
ubiquinol-9 biosynthesis (eukaryotic),
nicotianamine biosynthesis,
methionine biosynthesis II,
spermine biosynthesis,
choline biosynthesis II,
diphthamide biosynthesis,
homogalacturonan biosynthesis,
phosphatidylcholine biosynthesis II,
methylquercetin biosynthesis,
plastoquinol biosynthesis,
chlorophyllide a biosynthesis I,
ferulate and sinapate biosynthesis,
ubiquinol-10 biosynthesis (eukaryotic),
phenylpropanoid biosynthesis,
free phenylpropanoid acid biosynthesis,
seleno-amino acid detoxification and volatilization I,
plant sterol biosynthesis,
lipoate biosynthesis and incorporation I,
methyl indole-3-acetate interconversion,
cyclopropane and cyclopropene fatty acid biosynthesis,
spermidine biosynthesis I,
thiamine biosynthesis II,
methionine salvage pathway,
spermidine hydroxycinnamic acid conjugates biosynthesis,
simple coumarins biosynthesis,
phosphatidylcholine biosynthesis IV,
glutathione-mediated detoxification II,
S-adenosyl-L-methionine biosynthesis,
methionine degradation I (to homocysteine),
phosphatidylcholine biosynthesis III,
phylloquinol biosynthesis,
choline biosynthesis I,
biotin biosynthesis II,
vitamin E biosynthesis 		-0.7 0.41 -0.48 C0016