AT4G28750 : PSA E1 KNOCKOUT
Query Information
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AGICode AT4G28750
Description Photosystem I reaction centre subunit IV / PsaE protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G28750 Photosystem I reaction centre subunit IV / PsaE protein PSA E1 KNOCKOUT 1 0.32 -0.31
2 AT2G06520 photosystem II subunit X photosystem II subunit X 0.92 0.32 -0.32
3 AT1G55670 photosystem I subunit G photosystem I subunit G 0.92 0.32 -0.32
4 AT4G10340 light harvesting complex of photosystem II 5 light harvesting complex of
photosystem II 5		 0.91 0.29 -0.32
5 AT1G08380 photosystem I subunit O photosystem I subunit O 0.9 0.31 -0.34
6 AT1G06680 photosystem II subunit P-1 OXYGEN EVOLVING COMPLEX SUBUNIT 23
KDA, OXYGEN-EVOLVING ENHANCER
PROTEIN 2, photosystem II subunit
P-1, PHOTOSYSTEM II SUBUNIT P		 0.89 0.3 -0.3
7 AT1G31330 photosystem I subunit F photosystem I subunit F 0.89 0.3 -0.32
8 AT1G12900 glyceraldehyde 3-phosphate dehydrogenase A subunit 2 glyceraldehyde 3-phosphate
dehydrogenase A subunit 2		 0.88 0.31 -0.32
9 AT2G39730 rubisco activase rubisco activase 0.88 0.31 -0.3
10 AT4G02770 photosystem I subunit D-1 photosystem I subunit D-1 0.88 0.31 -0.31
11 AT3G59400 enzyme binding;tetrapyrrole binding GENOMES UNCOUPLED 4 0.87 0.33 -0.33
12 AT1G74470 Pyridine nucleotide-disulphide oxidoreductase family
protein		 0.87 0.33 -0.3
13 AT3G47470 light-harvesting chlorophyll-protein complex I subunit A4 CAB4, light-harvesting
chlorophyll-protein complex I
subunit A4		 0.86 0.29 -0.29
14 AT1G61520 photosystem I light harvesting complex gene 3 photosystem I light harvesting
complex gene 3		 0.86 0.31 -0.31
15 AT1G70730 Phosphoglucomutase/phosphomannomutase family protein phosphoglucomutase 2 0.85 0.33 -0.32
16 AT5G46110 Glucose-6-phosphate/phosphate translocator-related ACCLIMATION OF PHOTOSYNTHESIS TO
ENVIRONMENT 2, triose-phosphate
⁄ phosphate translocator		 0.85 0.3 -0.32
17 AT5G13630 magnesium-chelatase subunit chlH, chloroplast, putative /
Mg-protoporphyrin IX chelatase, putative (CHLH)		 ABA-BINDING PROTEIN, CONDITIONAL
CHLORINA, CCH1, H SUBUNIT OF
MG-CHELATASE, GENOMES UNCOUPLED 5		 0.85 0.32 -0.31
18 AT4G12800 photosystem I subunit l photosystem I subunit l 0.82 0.32 -0.32
19 AT1G12090 extensin-like protein extensin-like protein 0.81 0.33 -0.32
20 AT1G60950 2Fe-2S ferredoxin-like superfamily protein FERREDOXIN 2, FED A 0.81 0.31 -0.33
21 AT1G54500 Rubredoxin-like superfamily protein 0.81 0.32 -0.3
22 AT1G09310 Protein of unknown function, DUF538 0.8 0.33 -0.31
23 AT1G25500 Plasma-membrane choline transporter family protein -0.8 0.32 -0.3
24 AT4G25960 P-glycoprotein 2 ATP-binding cassette B2,
P-glycoprotein 2		 0.79 0.3 -0.3
25 AT1G15690 Inorganic H pyrophosphatase family protein ARABIDOPSIS THALIANA V-PPASE 3,
AtVHP1;1, AVP-3, AVP1, FUGU 5		 0.78 0.32 -0.3
26 AT5G54770 thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1)
(THI4)		 THI1, THIAMINE4, THIAZOLE
REQUIRING		 0.78 0.3 -0.31
27 AT5G12110 Glutathione S-transferase, C-terminal-like;Translation
elongation factor EF1B/ribosomal protein S6		 0.78 0.31 -0.3
28 AT1G28190 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G12340.1); Has 166 Blast hits
to 162 proteins in 36 species: Archae - 0; Bacteria - 2;
Metazoa - 15; Fungi - 5; Plants - 124; Viruses - 0; Other
Eukaryotes - 20 (source: NCBI BLink).		 -0.77 0.32 -0.31
29 AT4G18950 Integrin-linked protein kinase family -0.76 0.32 -0.34
30 AT1G64610 Transducin/WD40 repeat-like superfamily protein -0.75 0.33 -0.29
31 AT3G44190 FAD/NAD(P)-binding oxidoreductase family protein -0.75 0.32 -0.3
32 AT3G05290 peroxisomal adenine nucleotide carrier 1 AtPNC1, peroxisomal adenine
nucleotide carrier 1		 -0.75 0.3 -0.31
33 AT2G44500 O-fucosyltransferase family protein -0.75 0.32 -0.31
34 AT1G72900 Toll-Interleukin-Resistance (TIR) domain-containing protein -0.75 0.3 -0.3
35 AT1G02500 S-adenosylmethionine synthetase 1 AtSAM1, MAT1, METK1,
S-ADENOSYLMETHIONINE SYNTHETASE-1,
S-adenosylmethionine synthetase 1		 -0.74 0.29 -0.31
36 AT3G08990 Yippee family putative zinc-binding protein -0.73 0.32 -0.33
37 AT2G40110 Yippee family putative zinc-binding protein -0.73 0.33 -0.34
38 AT5G26030 ferrochelatase 1 ATFC-I, FC-I, ferrochelatase 1 -0.72 0.32 -0.28
39 AT5G03240 polyubiquitin 3 polyubiquitin 3 -0.72 0.32 -0.3
40 AT2G27500 Glycosyl hydrolase superfamily protein -0.72 0.31 -0.31
41 AT1G69890 Protein of unknown function (DUF569) -0.72 0.33 -0.32
42 AT4G28085 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.71 0.32 -0.3
43 AT1G79210 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 -0.71 0.31 -0.32
44 AT4G24380 INVOLVED IN: 10-formyltetrahydrofolate biosynthetic
process, folic acid and derivative biosynthetic process;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Serine hydrolase
(InterPro:IPR005645); BEST Arabidopsis thaliana protein
match is: alpha/beta-Hydrolases superfamily protein
(TAIR:AT5G65400.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.7 0.33 -0.3
45 AT1G09100 26S proteasome AAA-ATPase subunit RPT5B 26S proteasome AAA-ATPase subunit
RPT5B		 -0.7 0.32 -0.33
46 AT3G21070 NAD kinase 1 NAD KINASE 1, NAD kinase 1 -0.7 0.33 -0.31
47 AT4G39670 Glycolipid transfer protein (GLTP) family protein -0.7 0.34 -0.34
48 AT4G14350 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 -0.7 0.31 -0.31
49 AT4G37290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; LOCATED IN: endomembrane
system; EXPRESSED IN: cotyledon, hypocotyl, leaf; EXPRESSED
DURING: LP.04 four leaves visible; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G23270.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.7 0.3 -0.32
50 AT5G64260 EXORDIUM like 2 EXORDIUM like 2 -0.7 0.33 -0.31
51 AT5G02130 Tetratricopeptide repeat (TPR)-like superfamily protein NDP1 -0.69 0.31 -0.32
52 AT5G46780 VQ motif-containing protein -0.69 0.31 -0.32
53 AT2G23810 tetraspanin8 tetraspanin8 -0.69 0.31 -0.33
54 AT3G07780 Protein of unknown function (DUF1423) OBERON1 -0.69 0.33 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
55 C0120 Isocitric acid - Isocitrate TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
glutamine biosynthesis III,
glyoxylate cycle 		-0.83 0.44 -0.46 C0120
56 C0051 Aconitic acid cis-Aconitic acid cis-Aconitate glutamine biosynthesis III,
TCA cycle variation V (plant),
glyoxylate cycle,
TCA cycle variation III (eukaryotic) 		-0.77 0.45 -0.47 C0051