AT4G28540 : casein kinase I-like 6
Query Information
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AGICode AT4G28540
Description casein kinase I-like 6
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G28540 casein kinase I-like 6 casein kinase I-like 6, PAPK1 1 0.31 -0.33
2 AT2G25690 Protein of unknown function (DUF581) -0.8 0.3 -0.31
3 AT3G04830 Protein prenylyltransferase superfamily protein 0.78 0.32 -0.34
4 AT4G26430 COP9 signalosome subunit 6B COP9 signalosome subunit 6B 0.78 0.32 -0.31
5 AT4G39220 Rer1 family protein ATRER1A 0.78 0.32 -0.31
6 AT5G43840 heat shock transcription factor A6A heat shock transcription factor
A6A, heat shock transcription
factor A6A		 -0.77 0.32 -0.33
7 AT3G19980 flower-specific, phytochrome-associated protein phosphatase
3		 flower-specific,
phytochrome-associated protein
phosphatase 3, EMBRYO DEFECTIVE
2736, flower-specific,
phytochrome-associated protein
phosphatase 3, SERINE/THREONINE
PROTEIN PHOSPHATASE		 0.76 0.33 -0.32
8 AT5G19680 Leucine-rich repeat (LRR) family protein 0.75 0.3 -0.32
9 AT2G43770 Transducin/WD40 repeat-like superfamily protein 0.75 0.31 -0.3
10 AT3G22110 20S proteasome alpha subunit C1 20S proteasome alpha subunit C1 0.75 0.31 -0.31
11 AT1G22200 Endoplasmic reticulum vesicle transporter protein 0.74 0.32 -0.3
12 AT3G28200 Peroxidase superfamily protein 0.74 0.3 -0.31
13 AT5G57370 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1777 (InterPro:IPR013957); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.74 0.3 -0.32
14 AT3G12130 KH domain-containing protein / zinc finger (CCCH type)
family protein		 0.74 0.31 -0.31
15 AT2G43260 F-box and associated interaction domains-containing protein 0.73 0.32 -0.32
16 AT3G19630 Radical SAM superfamily protein 0.73 0.32 -0.31
17 AT1G04750 vesicle-associated membrane protein 721 AT VAMP7B, ATVAMP721,
vesicle-associated membrane
protein 721, VESICLE-ASSOCIATED
MEMBRANE PROTEIN 7B		 0.73 0.32 -0.34
18 AT2G34040 Apoptosis inhibitory protein 5 (API5) 0.73 0.3 -0.33
19 AT1G80500 SNARE-like superfamily protein 0.73 0.28 -0.33
20 AT1G20200 PAM domain (PCI/PINT associated module) protein EMBRYO DEFECTIVE 2719, HAPLESS 15 0.73 0.29 -0.3
21 AT4G34450 coatomer gamma-2 subunit, putative / gamma-2 coat protein,
putative / gamma-2 COP, putative		 0.73 0.32 -0.33
22 AT1G57943 purine permease 17 purine permease 17, purine
permease 17		 -0.73 0.3 -0.3
23 AT3G59990 methionine aminopeptidase 2B methionine aminopeptidase 2B 0.73 0.31 -0.3
24 AT1G03070 Bax inhibitor-1 family protein -0.72 0.34 -0.3
25 AT1G07570 Protein kinase superfamily protein APK1, APK1A 0.71 0.32 -0.33
26 AT2G20810 galacturonosyltransferase 10 galacturonosyltransferase 10, LGT4 0.71 0.31 -0.31
27 AT5G04270 DHHC-type zinc finger family protein 0.71 0.3 -0.29
28 AT4G31080 Protein of unknown function (DUF2296) 0.71 0.3 -0.32
29 AT3G04780 Protein of unknown function (DUF1000) 0.71 0.31 -0.31
30 AT5G05820 Nucleotide-sugar transporter family protein 0.71 0.31 -0.3
31 AT5G60920 COBRA-like extracellular glycosyl-phosphatidyl
inositol-anchored protein family		 COBRA 0.71 0.32 -0.3
32 AT1G05810 RAB GTPase homolog A5E ARA, ARA-1, ATRAB11D, ARABIDOPSIS
THALIANA RAB GTPASE HOMOLOG A5E,
RAB GTPase homolog A5E		 0.71 0.31 -0.3
33 AT5G49720 glycosyl hydrolase 9A1 glycosyl hydrolase 9A1, DEFECTIVE
CYTOKINESIS, glycosyl hydrolase
9A1, IRREGULAR XYLEM 2, KORRIGAN,
KORRIGAN 1, RADIALLY SWOLLEN 2,
TUMOROUS SHOOT DEVELOPMENT 1		 0.71 0.32 -0.32
34 AT1G02140 mago nashi family protein HAPLESS 1, MAGO NASHI, MATERNAL
EFFECT EMBRYO ARREST 63		 0.71 0.32 -0.31
35 AT3G58450 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.71 0.31 -0.33
36 AT4G38150 Pentatricopeptide repeat (PPR) superfamily protein 0.71 0.31 -0.32
37 AT2G30260 U2 small nuclear ribonucleoprotein B U2 small nuclear ribonucleoprotein
B		 0.7 0.33 -0.33
38 AT1G67620 Lojap-related protein 0.7 0.32 -0.3
39 AT3G18940 clast3-related 0.7 0.31 -0.3
40 AT4G25260 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.7 0.3 -0.32
41 AT1G26580 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: ELM2 domain-containing protein
(TAIR:AT2G03470.1); Has 161 Blast hits to 161 proteins in
17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi -
4; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.7 0.3 -0.32
42 AT3G57540 Remorin family protein -0.69 0.33 -0.32
43 AT5G57460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane, chloroplast; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 166 Blast hits to
166 proteins in 41 species: Archae - 0; Bacteria - 0;
Metazoa - 112; Fungi - 4; Plants - 36; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink).		 0.69 0.31 -0.31
44 AT2G37020 Translin family protein 0.69 0.33 -0.32
45 AT3G12770 mitochondrial editing factor 22 mitochondrial editing factor 22 0.69 0.3 -0.33
46 AT3G22490 Seed maturation protein -0.69 0.3 -0.31
47 AT2G47770 TSPO(outer membrane tryptophan-rich sensory
protein)-related		 TSPO(outer membrane
tryptophan-rich sensory
protein)-related, TSPO(outer
membrane tryptophan-rich sensory
protein)-related		 -0.69 0.3 -0.33
48 AT5G57080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 7 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G26055.1); Has 14 Blast hits to 14 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.69 0.3 -0.3
49 AT3G57360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G02370.2); Has 122 Blast hits
to 122 proteins in 54 species: Archae - 0; Bacteria - 0;
Metazoa - 74; Fungi - 4; Plants - 41; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 0.68 0.31 -0.32
50 AT3G25730 ethylene response DNA binding factor 3 ethylene response DNA binding
factor 3		 0.68 0.33 -0.33
51 AT4G35335 Nucleotide-sugar transporter family protein 0.68 0.33 -0.3
52 AT2G23070 Protein kinase superfamily protein 0.68 0.33 -0.3
53 AT3G13800 Metallo-hydrolase/oxidoreductase superfamily protein 0.68 0.31 -0.32
54 AT5G11640 Thioredoxin superfamily protein 0.68 0.34 -0.32
55 AT1G47280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; Has 6 Blast hits to 6
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.68 0.33 -0.32
56 AT2G25430 epsin N-terminal homology (ENTH) domain-containing protein
/ clathrin assembly protein-related		 0.68 0.3 -0.32
57 AT1G72340 NagB/RpiA/CoA transferase-like superfamily protein 0.68 0.31 -0.34
58 AT4G08420 transposable element gene 0.67 0.31 -0.33
59 AT5G53890 phytosylfokine-alpha receptor 2 AtPSKR2, phytosylfokine-alpha
receptor 2		 -0.67 0.3 -0.32
60 AT2G23310 Rer1 family protein ATRER1C1 0.67 0.3 -0.35
61 AT5G49410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G73940.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.67 0.31 -0.34
62 AT5G39760 homeobox protein 23 homeobox protein 23, homeobox
protein 23, ZINC FINGER
HOMEODOMAIN 10		 0.67 0.3 -0.32
63 AT4G09570 calcium-dependent protein kinase 4 ATCPK4, calcium-dependent protein
kinase 4		 0.67 0.31 -0.32
64 AT5G10930 CBL-interacting protein kinase 5 CBL-interacting protein kinase 5,
SNF1-RELATED PROTEIN KINASE 3.24		 -0.67 0.31 -0.3
65 AT1G17870 ethylene-dependent gravitropism-deficient and
yellow-green-like 3		 ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3,
ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3		 -0.66 0.3 -0.32
66 AT5G53710 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 8 plant structures;
EXPRESSED DURING: 4 anthesis, C globular stage, petal
differentiation and expansion stage; Has 30201 Blast hits
to 17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.66 0.32 -0.32
67 AT5G62400 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.66 0.35 -0.32
68 AT2G19550 alpha/beta-Hydrolases superfamily protein -0.65 0.32 -0.3
69 AT3G44030 pseudogene, similar to OSJNBb0043H09.1, blastp match of 40%
identity and 8.4e-38 P-value to
GP|21740634|emb|CAD40195.1||AL606611 OSJNBb0043H09.1 {Oryza
sativa (japonica cultivar-group)}		 -0.65 0.31 -0.31
70 AT5G62800 Protein with RING/U-box and TRAF-like domains -0.64 0.32 -0.31
71 AT1G01830 ARM repeat superfamily protein -0.63 0.31 -0.31
72 AT5G05220 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.63 0.31 -0.31
73 AT4G04150 transposable element gene -0.62 0.32 -0.32
74 AT5G58160 actin binding -0.62 0.32 -0.31
75 AT4G18395 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.62 0.31 -0.3
76 AT5G44310 Late embryogenesis abundant protein (LEA) family protein -0.62 0.32 -0.29
77 AT2G15080 receptor like protein 19 receptor like protein 19, receptor
like protein 19		 -0.61 0.31 -0.33
78 AT1G30950 F-box family protein UNUSUAL FLORAL ORGANS -0.61 0.32 -0.29
79 AT2G48060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: shoot, sperm cell;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341
proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa
- 318; Fungi - 0; Plants - 93; Viruses - 0; Other
Eukaryotes - 105 (source: NCBI BLink).		 -0.6 0.33 -0.32
80 AT3G49300 proline-rich family protein -0.6 0.32 -0.31
81 AT5G18450 Integrase-type DNA-binding superfamily protein -0.59 0.32 -0.31
82 AT5G26190 Cysteine/Histidine-rich C1 domain family protein -0.59 0.31 -0.3
83 AT1G63280 Serine protease inhibitor (SERPIN) family protein -0.58 0.31 -0.32
84 AT3G24790 Protein kinase superfamily protein -0.58 0.31 -0.31
85 AT2G42560 late embryogenesis abundant domain-containing protein / LEA
domain-containing protein		 -0.58 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
86 C0009 myo-Inositol - myo-Inositol stachyose biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
D-myo-inositol (1,4,5)-trisphosphate degradation,
galactosylcyclitol biosynthesis,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
phytate degradation I,
myo-inositol biosynthesis,
ajugose biosynthesis I (galactinol-dependent),
phospholipid biosynthesis II 		-0.64 0.45 -0.46 C0009
87 C0254 Threonine D,L-Threonine L-Threonine isoleucine biosynthesis I (from threonine),
glycine biosynthesis,
threonine biosynthesis from homoserine,
tRNA charging 		-0.61 0.31 -0.32 C0254