AT4G28590 : Mesophyll-cell RNAi Library line 7
Query Information
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AGICode AT4G28590
Description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT2G31840.1); Has 114 Blast hits to 112 proteins in 39 species: Archae - 2; Bacteria - 0; Metazoa - 17; Fungi - 6; Plants - 67; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G28590 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10
growth stages; BEST Arabidopsis thaliana protein match is:
Thioredoxin superfamily protein (TAIR:AT2G31840.1); Has 114
Blast hits to 112 proteins in 39 species: Archae - 2;
Bacteria - 0; Metazoa - 17; Fungi - 6; Plants - 67; Viruses
- 0; Other Eukaryotes - 22 (source: NCBI BLink).		 Mesophyll-cell RNAi Library line 7 1 0.29 -0.31
2 AT2G47840 Uncharacterised conserved protein ycf60 translocon at the inner envelope
membrane of chloroplasts 20-II,
translocon at the inner envelope
membrane of chloroplasts 20-II		 0.86 0.31 -0.32
3 AT5G48630 Cyclin family protein 0.83 0.34 -0.31
4 AT1G14410 ssDNA-binding transcriptional regulator A. THALIANA WHIRLY 1, PTAC1,
WHIRLY 1		 0.83 0.32 -0.28
5 AT3G57560 N-acetyl-l-glutamate kinase N-acetyl-l-glutamate kinase 0.8 0.34 -0.3
6 AT3G54090 fructokinase-like 1 fructokinase-like 1 0.8 0.32 -0.32
7 AT5G17840 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.8 0.3 -0.3
8 AT3G07430 YGGT family protein ATYLMG1-1, embryo defective 1990,
YLMG1-1		 0.78 0.33 -0.29
9 AT3G04550 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G28500.1); Has 110 Blast hits to 110 proteins in
51 species: Archae - 0; Bacteria - 67; Metazoa - 1; Fungi -
0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.78 0.3 -0.31
10 AT5G08400 Protein of unknown function (DUF3531) 0.78 0.32 -0.34
11 AT3G02600 lipid phosphate phosphatase 3 LIPID PHOSPHATE PHOSPHATASE 3,
lipid phosphate phosphatase 3		 0.77 0.33 -0.33
12 AT2G22870 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 embryo defective 2001 0.77 0.31 -0.32
13 AT3G53700 Pentatricopeptide repeat (PPR) superfamily protein maternal effect embryo arrest 40 0.77 0.32 -0.3
14 AT3G20320 trigalactosyldiacylglycerol2 ATP-binding cassette I15,
trigalactosyldiacylglycerol2		 0.76 0.31 -0.3
15 AT4G39235 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G05570.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.76 0.33 -0.32
16 AT5G23070 Thymidine kinase 0.76 0.29 -0.32
17 AT4G24175 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0307
(InterPro:IPR006839); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.75 0.32 -0.33
18 AT1G31500 DNAse I-like superfamily protein 0.74 0.33 -0.3
19 AT5G53860 embryo defective 2737 embryo defective 2737, EMBRYO
DEFECTIVE 64		 0.72 0.3 -0.31
20 AT3G49810 ARM repeat superfamily protein -0.69 0.32 -0.32
21 AT5G60890 myb domain protein 34 ATMYB34, ALTERED TRYPTOPHAN
REGULATION 1, myb domain protein
34		 -0.67 0.32 -0.31
22 AT5G54400 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.64 0.33 -0.33
23 AT3G50220 Protein of unknown function (DUF579) IRREGULAR XYLEM 15 -0.63 0.32 -0.32
24 AT5G51420 long-chain-alcohol O-fatty-acyltransferase family protein /
wax synthase family protein		 -0.6 0.31 -0.31
25 AT2G38490 CBL-interacting protein kinase 22 CBL-interacting protein kinase 22,
SNF1-RELATED PROTEIN KINASE 3.19		 -0.57 0.3 -0.34
26 AT4G38240 alpha-1,3-mannosyl-glycoprotein
beta-1,2-N-acetylglucosaminyltransferase, putative		 COMPLEX GLYCAN LESS, COMPLEX
GLYCAN LESS 1,
N-ACETYLGLUCOSAMINYLTRANSFERASE I		 -0.57 0.3 -0.3
27 AT3G14250 RING/U-box superfamily protein -0.57 0.31 -0.32
28 AT1G17240 receptor like protein 2 receptor like protein 2, receptor
like protein 2		 -0.56 0.32 -0.3
29 AT1G65480 PEBP (phosphatidylethanolamine-binding protein) family
protein		 FLOWERING LOCUS T -0.56 0.29 -0.32
30 AT2G17550 unknown protein; Has 264 Blast hits to 258 proteins in 65
species: Archae - 5; Bacteria - 5; Metazoa - 66; Fungi -
16; Plants - 107; Viruses - 0; Other Eukaryotes - 65
(source: NCBI BLink).		 -0.56 0.31 -0.32
31 AT4G02160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G61710.1); Has 35 Blast hits
to 35 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.31 -0.34
32 AT1G64590 NAD(P)-binding Rossmann-fold superfamily protein -0.55 0.31 -0.29
33 AT1G28080 RING finger protein -0.55 0.3 -0.34
34 AT5G55970 RING/U-box superfamily protein -0.54 0.32 -0.3