AT4G28140 : -
Query Information
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AGICode AT4G28140
Description Integrase-type DNA-binding superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G28140 Integrase-type DNA-binding superfamily protein 1 0.31 -0.32
2 AT5G35920 cytochrome P450, family 79, subfamily A, polypeptide 4
pseudogene		 cytochrome P450, family 79,
subfamily A, polypeptide 4
pseudogene		 -0.66 0.32 -0.31
3 AT3G42350 transposable element gene 0.65 0.35 -0.34
4 AT1G06750 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.65 0.31 -0.32
5 AT2G03630 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G74220.1); Has 126 Blast hits
to 126 proteins in 28 species: Archae - 0; Bacteria - 6;
Metazoa - 7; Fungi - 5; Plants - 87; Viruses - 0; Other
Eukaryotes - 21 (source: NCBI BLink).		 -0.63 0.29 -0.3
6 AT3G44600 cyclophilin71 AtCYP71, cyclophilin 71 0.62 0.3 -0.32
7 AT1G42570 pseudogene, similar to P0529E05.9, blastp match of 56%
identity and 1.2e-110 P-value to
GP|18461196|dbj|BAB84393.1||AP003279 P0529E05.9 {Oryza
sativa (japonica cultivar-group)}		 0.62 0.31 -0.33
8 AT2G41570 transposable element gene -0.62 0.31 -0.32
9 AT3G48940 Remorin family protein 0.61 0.33 -0.31
10 AT2G28940 Protein kinase superfamily protein -0.61 0.32 -0.3
11 AT4G16350 calcineurin B-like protein 6 calcineurin B-like protein 6,
SOS3-LIKE CALCIUM BINDING PROTEIN
2		 0.61 0.29 -0.32
12 AT4G08650 transposable element gene 0.61 0.3 -0.3
13 AT4G15350 cytochrome P450, family 705, subfamily A, polypeptide 2 cytochrome P450, family 705,
subfamily A, polypeptide 2		 0.61 0.33 -0.32
14 AT5G05320 FAD/NAD(P)-binding oxidoreductase family protein 0.61 0.32 -0.31
15 AT2G17050 disease resistance protein (TIR-NBS-LRR class), putative 0.61 0.32 -0.33
16 AT1G10620 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 11, proline-rich
extensin-like receptor kinase 11		 0.6 0.31 -0.33
17 AT1G31840 Tetratricopeptide repeat (TPR)-like superfamily protein 0.59 0.31 -0.31
18 AT5G14560 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.33 -0.31
19 AT1G19930 Galactose oxidase/kelch repeat superfamily protein 0.58 0.32 -0.31
20 AT4G00630 K+ efflux antiporter 2 ATKEA2, K+ efflux antiporter 2 -0.58 0.33 -0.3
21 AT4G15740 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.58 0.34 -0.29
22 AT2G06700 transposable element gene 0.58 0.32 -0.3
23 AT4G29240 Leucine-rich repeat (LRR) family protein 0.57 0.34 -0.29
24 AT1G74620 RING/U-box superfamily protein 0.56 0.32 -0.32
25 AT3G15605 nucleic acid binding 0.56 0.31 -0.32
26 AT5G46850 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.56 0.33 -0.32
27 AT2G23550 methyl esterase 6 ALPHA/BETA FOLD HYDROLASE/ESTERASE
1, METHYL ESTERASE 6, methyl
esterase 6		 0.56 0.33 -0.32
28 AT2G42830 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 5, SHATTERPROOF 2 0.55 0.3 -0.32
29 AT3G30220 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43150.1); Has 30 Blast hits
to 30 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.3 -0.32
30 AT4G25040 Uncharacterised protein family (UPF0497) 0.55 0.3 -0.31
31 AT1G03890 RmlC-like cupins superfamily protein 0.55 0.33 -0.32
32 AT1G14420 Pectate lyase family protein AT59 -0.55 0.3 -0.29
33 AT2G04380 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.54 0.31 -0.32
34 AT5G67520 adenosine-5'-phosphosulfate (APS) kinase 4 adenosine-5'-phosphosulfate (APS)
kinase 4		 0.54 0.33 -0.31
35 AT3G01730 unknown protein; Has 8 Blast hits to 8 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.53 0.31 -0.32
36 AT5G46940 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.53 0.32 -0.3
37 AT3G51560 Disease resistance protein (TIR-NBS-LRR class) family -0.52 0.31 -0.32
38 AT3G61040 cytochrome P450, family 76, subfamily C, polypeptide 7 cytochrome P450, family 76,
subfamily C, polypeptide 7		 0.52 0.31 -0.34
39 AT5G16560 Homeodomain-like superfamily protein KANADI, KANADI 1 -0.52 0.3 -0.32
40 AT3G01020 ISCU-like 2 ISCU-LIKE 2, ISCU-like 2 0.52 0.29 -0.32
41 AT4G09860 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.52 0.32 -0.33
42 AT1G30020 Protein of unknown function, DUF538 0.52 0.32 -0.31
43 AT4G16820 alpha/beta-Hydrolases superfamily protein phospholipase A I beta 2 -0.51 0.3 -0.31
44 AT3G49630 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.51 0.32 -0.3
45 AT5G52710 Copper transport protein family 0.51 0.31 -0.33
46 AT2G32000 DNA topoisomerase, type IA, core 0.51 0.32 -0.32
47 AT5G62830 F-box associated ubiquitination effector family protein 0.51 0.31 -0.32
48 AT4G28280 LORELEI-LIKE-GPI ANCHORED PROTEIN 3 LORELEI-LIKE-GPI ANCHORED PROTEIN
3		 -0.51 0.3 -0.33
49 AT4G03230 S-locus lectin protein kinase family protein -0.5 0.32 -0.32
50 AT1G02813 Protein of unknown function, DUF538 0.5 0.32 -0.31
51 AT5G55020 myb domain protein 120 ATMYB120, myb domain protein 120 0.5 0.32 -0.3
52 AT2G16110 pseudogene, similar to putative AP endonuclease/reverse
transcriptase, blastp match of 34% identity and 5.9e-45
P-value to GP|21952510|gb|AAM82604.1|AF525305_2|AF525305
putative AP endonuclease/reverse transcriptase {Brassica
napus}		 0.5 0.31 -0.32
53 AT1G40150 transposable element gene -0.5 0.31 -0.32
54 AT5G52130 unknown protein; Has 10 Blast hits to 10 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.5 0.3 -0.31
55 AT5G23970 HXXXD-type acyl-transferase family protein -0.49 0.33 -0.32
56 AT5G16850 telomerase reverse transcriptase telomerase reverse transcriptase,
telomerase reverse transcriptase		 -0.49 0.33 -0.32
57 AT5G45230 Disease resistance protein (TIR-NBS-LRR class) family -0.48 0.32 -0.3
58 AT3G03260 homeodomain GLABROUS 8 homeodomain GLABROUS 8 -0.48 0.32 -0.31
59 AT5G45220 Disease resistance protein (TIR-NBS-LRR class) family -0.47 0.32 -0.33
60 AT3G28790 Protein of unknown function (DUF1216) -0.47 0.34 -0.31
61 AT1G41820 unknown protein; Has 46 Blast hits to 46 proteins in 21
species: Archae - 0; Bacteria - 6; Metazoa - 8; Fungi - 2;
Plants - 5; Viruses - 1; Other Eukaryotes - 24 (source:
NCBI BLink).		 -0.47 0.31 -0.34
62 AT1G36970 Domain of unknown function (DUF1985) -0.46 0.32 -0.33
63 AT1G20780 senescence-associated E3 ubiquitin ligase 1 ARABIDOPSIS THALIANA PLANT U-BOX
44, PLANT U-BOX 44,
senescence-associated E3 ubiquitin
ligase 1		 -0.46 0.31 -0.3
64 ATMG00510 NADH dehydrogenase subunit 7 NADH dehydrogenase subunit 7 -0.46 0.31 -0.31
65 AT1G62720 Pentatricopeptide repeat (PPR-like) superfamily protein AtNG1, novel gene 1 -0.45 0.3 -0.31
66 AT3G19690 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.45 0.3 -0.32
67 AT3G25810 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.44 0.33 -0.32
68 AT4G15710 unknown protein; Has 18 Blast hits to 18 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.44 0.3 -0.33
69 AT3G13680 F-box and associated interaction domains-containing protein -0.43 0.31 -0.33
70 AT5G48710 Ubiquitin-like superfamily protein -0.43 0.31 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
71 C0211 PR_MST_2158.8 - - - -0.66 0.43 -0.43
72 C0231 Serine D,L-Serine D-Serine; L-Serine sphingolipid biosynthesis (plants),
folate polyglutamylation,
tryptophan biosynthesis,
phospholipid biosynthesis II,
homocysteine and cysteine interconversion,
photorespiration,
seleno-amino acid biosynthesis,
glycine biosynthesis,
tRNA charging,
serine racemization,
phosphatidylethanolamine biosynthesis I,
serine biosynthesis,
choline biosynthesis I,
cysteine biosynthesis I,
folate transformations II 		-0.59 0.31 -0.29 C0231
73 C0102 Glutamine D,L-Glutamine L-Glutamine ammonia assimilation cycle II,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
purine nucleotides de novo biosynthesis II,
tetrahydrofolate biosynthesis II,
NAD biosynthesis I (from aspartate),
nitrate reduction II (assimilatory),
5-aminoimidazole ribonucleotide biosynthesis I,
citrulline biosynthesis,
pyrimidine ribonucleotides interconversion,
histidine biosynthesis,
indole-3-acetyl-amino acid biosynthesis,
pyridoxal 5'-phosphate biosynthesis II,
arginine biosynthesis I,
UDP-N-acetyl-D-glucosamine biosynthesis II,
pyridine nucleotide cycling (plants),
glutamate biosynthesis IV,
glutamine biosynthesis III,
glutamate biosynthesis V,
asparagine biosynthesis III (tRNA-dependent),
tryptophan biosynthesis,
L-glutamine biosynthesis II (tRNA-dependent),
uridine-5'-phosphate biosynthesis,
tRNA charging,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
asparagine biosynthesis I 		-0.49 0.31 -0.33 C0102