AT4G28250 : expansin B3
Query Information
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AGICode AT4G28250
Description expansin B3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G28250 expansin B3 expansin B3, ATHEXP BETA 1.6,
expansin B3		 1 0.32 -0.33
2 AT4G24780 Pectin lyase-like superfamily protein 0.83 0.32 -0.31
3 AT1G33170 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.82 0.31 -0.33
4 AT2G46780 RNA-binding (RRM/RBD/RNP motifs) family protein 0.82 0.31 -0.3
5 AT5G63180 Pectin lyase-like superfamily protein 0.8 0.32 -0.32
6 AT4G38370 Phosphoglycerate mutase family protein 0.79 0.3 -0.32
7 AT1G06830 Glutaredoxin family protein 0.79 0.33 -0.31
8 AT1G31320 LOB domain-containing protein 4 LOB domain-containing protein 4 0.78 0.35 -0.31
9 AT2G41280 late embryogenesis abundant protein (M10) / LEA protein M10 ATM10, M10 -0.77 0.32 -0.32
10 AT1G75500 Walls Are Thin 1 Walls Are Thin 1 0.77 0.31 -0.32
11 AT5G60490 FASCICLIN-like arabinogalactan-protein 12 FASCICLIN-like
arabinogalactan-protein 12		 0.76 0.3 -0.33
12 AT1G03820 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1345 Blast hits to
1122 proteins in 102 species: Archae - 2; Bacteria - 28;
Metazoa - 28; Fungi - 30; Plants - 109; Viruses - 0; Other
Eukaryotes - 1148 (source: NCBI BLink).		 0.76 0.31 -0.31
13 AT1G04310 ethylene response sensor 2 ethylene response sensor 2 -0.75 0.34 -0.3
14 AT5G16590 Leucine-rich repeat protein kinase family protein Leucine rich repeat protein 1 0.75 0.32 -0.33
15 AT5G49690 UDP-Glycosyltransferase superfamily protein -0.75 0.33 -0.33
16 AT3G46490 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.75 0.31 -0.31
17 AT1G66940 protein kinase-related 0.75 0.32 -0.3
18 AT2G40610 expansin A8 ATEXP8, expansin A8, ATHEXP ALPHA
1.11, EXP8, expansin A8		 0.75 0.31 -0.32
19 AT3G55420 unknown protein; Has 21 Blast hits to 21 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.74 0.31 -0.3
20 AT2G21180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G19875.1); Has 124 Blast hits
to 124 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.73 0.31 -0.31
21 AT1G09160 Protein phosphatase 2C family protein 0.73 0.32 -0.33
22 AT5G13330 related to AP2 6l related to AP2 6l -0.73 0.34 -0.31
23 AT1G03790 Zinc finger C-x8-C-x5-C-x3-H type family protein SOMNUS -0.73 0.32 -0.33
24 AT3G18280 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.73 0.31 -0.32
25 AT3G01860 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to cadmium ion; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G27210.1); Has 66 Blast
hits to 66 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 5; Fungi - 0; Plants - 61; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.73 0.32 -0.32
26 AT3G56480 myosin heavy chain-related 0.73 0.32 -0.3
27 AT5G07030 Eukaryotic aspartyl protease family protein 0.72 0.32 -0.32
28 AT2G24440 selenium binding 0.72 0.31 -0.32
29 AT5G66590 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.72 0.33 -0.3
30 AT4G33150 lysine-ketoglutarate reductase/saccharopine dehydrogenase
bifunctional enzyme		 LKR, LYSINE-KETOGLUTARATE
REDUCTASE/SACCHAROPINE
DEHYDROGENASE, SACCHAROPINE
DEHYDROGENASE		 -0.72 0.32 -0.31
31 AT1G80280 alpha/beta-Hydrolases superfamily protein 0.72 0.3 -0.32
32 AT2G25940 alpha-vacuolar processing enzyme alpha-vacuolar processing enzyme,
ALPHAVPE		 -0.72 0.31 -0.31
33 AT1G48000 myb domain protein 112 myb domain protein 112, myb domain
protein 112		 -0.71 0.32 -0.31
34 AT1G27150 Tetratricopeptide repeat (TPR)-like superfamily protein -0.71 0.3 -0.32
35 AT5G54590 Protein kinase superfamily protein calcium/calmodulin-regulated
receptor-like kinase 1		 0.7 0.32 -0.29
36 AT5G16530 Auxin efflux carrier family protein PIN-FORMED 5 0.7 0.35 -0.32
37 AT3G04070 NAC domain containing protein 47 NAC domain containing protein 47,
NAC domain containing protein 47		 -0.7 0.33 -0.31
38 AT2G28080 UDP-Glycosyltransferase superfamily protein 0.7 0.3 -0.34
39 AT1G59740 Major facilitator superfamily protein -0.7 0.31 -0.32
40 AT2G36080 AP2/B3-like transcriptional factor family protein -0.7 0.3 -0.31
41 AT5G49800 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.7 0.31 -0.3
42 AT2G42620 RNI-like superfamily protein MORE AXILLARY BRANCHES 2, ORESARA
9, PLEIOTROPIC PHOTOSIGNALING		 -0.69 0.3 -0.33
43 AT5G24030 SLAC1 homologue 3 SLAC1 homologue 3 -0.69 0.31 -0.34
44 AT4G19390 Uncharacterised protein family (UPF0114) -0.69 0.31 -0.31
45 AT4G26080 Protein phosphatase 2C family protein ABA INSENSITIVE 1, AtABI1 -0.69 0.31 -0.34
46 AT4G34860 Plant neutral invertase family protein alkaline/neutral invertase B -0.69 0.33 -0.32
47 AT3G56170 Ca-2+ dependent nuclease Ca-2+ dependent nuclease -0.69 0.3 -0.31
48 AT2G20320 DENN (AEX-3) domain-containing protein -0.69 0.32 -0.3
49 AT4G36630 Vacuolar sorting protein 39 EMBRYO DEFECTIVE 2754 -0.69 0.32 -0.32
50 AT3G04240 Tetratricopeptide repeat (TPR)-like superfamily protein secret agent -0.69 0.31 -0.31
51 AT3G27870 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.69 0.33 -0.32
52 AT3G01520 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.69 0.31 -0.31
53 AT3G12500 basic chitinase basic chitinase, B-CHI, CHI-B,
basic chitinase,
PATHOGENESIS-RELATED 3,
PATHOGENESIS-RELATED 3		 -0.68 0.34 -0.34
54 AT4G14330 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.68 0.31 -0.32
55 AT3G48510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G63350.1); Has 98 Blast hits
to 98 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.31 -0.31
56 AT4G09550 AtGCP3 interacting protein 1 ARABIDOPSIS ATGCP3 INTERACTING
PROTEIN 1, AtGCP3 interacting
protein 1		 0.68 0.33 -0.31
57 AT1G69310 WRKY DNA-binding protein 57 ATWRKY57, WRKY DNA-binding protein
57		 -0.68 0.31 -0.3
58 AT1G21160 eukaryotic translation initiation factor 2 (eIF-2) family
protein		 -0.68 0.34 -0.31
59 AT1G65920 Regulator of chromosome condensation (RCC1) family with
FYVE zinc finger domain		 -0.68 0.3 -0.32
60 AT2G24260 LJRHL1-like 1 LJRHL1-like 1 -0.68 0.31 -0.31
61 AT5G49700 Predicted AT-hook DNA-binding family protein -0.68 0.31 -0.33
62 AT5G14780 formate dehydrogenase formate dehydrogenase -0.68 0.31 -0.33
63 AT5G62330 BEST Arabidopsis thaliana protein match is: Plant
invertase/pectin methylesterase inhibitor superfamily
protein (TAIR:AT5G62340.1); Has 9 Blast hits to 9 proteins
in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.67 0.3 -0.32
64 AT2G29510 Protein of unknown function (DUF3527) 0.67 0.32 -0.3
65 AT1G70470 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G23530.1); Has 64 Blast hits
to 64 proteins in 22 species: Archae - 0; Bacteria - 2;
Metazoa - 7; Fungi - 10; Plants - 43; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.67 0.31 -0.32
66 AT3G24230 Pectate lyase family protein 0.67 0.33 -0.33
67 AT2G18360 alpha/beta-Hydrolases superfamily protein -0.67 0.29 -0.32
68 AT3G54940 Papain family cysteine protease -0.67 0.32 -0.33
69 AT1G80520 Sterile alpha motif (SAM) domain-containing protein 0.67 0.32 -0.31
70 AT3G46880 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G59080.1); Has 51 Blast
hits to 51 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.32 -0.33
71 AT4G16240 unknown protein; Has 17010 Blast hits to 4557 proteins in
509 species: Archae - 32; Bacteria - 2889; Metazoa - 6537;
Fungi - 648; Plants - 4769; Viruses - 447; Other Eukaryotes
- 1688 (source: NCBI BLink).		 -0.67 0.32 -0.33
72 AT5G50890 alpha/beta-Hydrolases superfamily protein 0.67 0.34 -0.32
73 AT1G27461 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.67 0.32 -0.31
74 AT1G54330 NAC domain containing protein 20 NAC domain containing protein 20,
NAC domain containing protein 20		 0.66 0.32 -0.33
75 AT3G10310 P-loop nucleoside triphosphate hydrolases superfamily
protein with CH (Calponin Homology) domain		 0.66 0.31 -0.32
76 AT5G06790 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, LP.02 two leaves
visible, petal differentiation and expansion stage, D
bilateral stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G57950.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.66 0.33 -0.31
77 AT2G03090 expansin A15 ATEXP15, expansin A15, ATHEXP
ALPHA 1.3, EXPANSIN 15, expansin
A15		 0.66 0.33 -0.32
78 AT5G07010 sulfotransferase 2A ARABIDOPSIS THALIANA
SULFOTRANSFERASE 2A,
sulfotransferase 2A		 -0.66 0.32 -0.33
79 AT1G04990 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.66 0.31 -0.29
80 AT1G18100 PEBP (phosphatidylethanolamine-binding protein) family
protein		 E12A11, MOTHER OF FT AND TFL1 -0.66 0.31 -0.33
81 AT1G60140 trehalose phosphate synthase trehalose phosphate synthase,
trehalose phosphate synthase,
TREHALOSE PHOSPHATE SYNTHASE 10		 -0.66 0.31 -0.32
82 AT2G27150 abscisic aldehyde oxidase 3 abscisic aldehyde oxidase 3,
Aldehyde oxidase delta,
Arabidopsis thaliana aldehyde
oxidase 3, AtAAO3		 -0.66 0.31 -0.29
83 AT4G11050 glycosyl hydrolase 9C3 glycosyl hydrolase 9C3, glycosyl
hydrolase 9C3		 0.66 0.33 -0.32
84 AT1G10880 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.66 0.32 -0.32
85 AT4G12030 bile acid transporter 5 BILE ACID:SODIUM SYMPORTER FAMILY
PROTEIN 5, bile acid transporter 5		 0.66 0.33 -0.33
86 AT5G28630 glycine-rich protein 0.65 0.29 -0.3
87 AT5G56260 Ribonuclease E inhibitor RraA/Dimethylmenaquinone
methyltransferase		 0.65 0.32 -0.33
88 AT1G77380 amino acid permease 3 amino acid permease 3, ATAAP3 -0.65 0.33 -0.33
89 AT1G65620 Lateral organ boundaries (LOB) domain family protein ASYMMETRIC LEAVES 2 0.65 0.3 -0.31
90 AT5G23400 Leucine-rich repeat (LRR) family protein 0.65 0.33 -0.34
91 AT5G11210 glutamate receptor 2.5 ARABIDOPSIS THALIANA GLU,
glutamate receptor 2.5		 -0.65 0.29 -0.33
92 AT2G47410 WD40/YVTN repeat-like-containing domain;Bromodomain -0.65 0.29 -0.32
93 AT5G47810 phosphofructokinase 2 phosphofructokinase 2 -0.65 0.31 -0.31
94 AT2G46800 zinc transporter of Arabidopsis thaliana A. THALIANA CATION DIFFUSION
FACILITATOR 1, ATMTP1, MTP1, zinc
transporter of Arabidopsis
thaliana, ZINC TRANSPORTER OF
ARABIDOPSIS THALIANA 1		 -0.65 0.33 -0.34
95 AT4G25140 oleosin 1 OLEOSIN 1, oleosin 1 -0.65 0.32 -0.31
96 AT3G19290 ABRE binding factor 4 ABRE binding factor 4,
ABA-RESPONSIVE ELEMENT BINDING
PROTEIN 2		 -0.65 0.32 -0.32
97 AT2G25450 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.65 0.32 -0.34
98 AT4G15910 drought-induced 21 drought-induced 21,
drought-induced 21		 -0.65 0.34 -0.34
99 AT1G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast
hits to 43153 proteins in 1828 species: Archae - 30;
Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants -
7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI
BLink).		 -0.65 0.33 -0.33
100 AT5G39610 NAC domain containing protein 6 Arabidopsis NAC domain containing
protein 92, NAC domain containing
protein 2, NAC domain containing
protein 6, NAC domain containing
protein 2, NAC domain containing
protein 6, ORESARA 1		 -0.65 0.32 -0.34
101 AT1G15310 signal recognition particle 54 kDa subunit signal recognition particle 54 kDa
subunit, SIGNAL RECOGNITION
PARTICLE 54 KDA SUBUNIT		 -0.64 0.31 -0.31
102 AT3G14595 Ribosomal protein L18ae family -0.64 0.3 -0.31
103 AT3G13360 WPP domain interacting protein 3 WPP domain interacting protein 3 0.64 0.32 -0.31
104 AT3G62650 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G47485.1); Has 57 Blast hits
to 57 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.32 -0.33
105 AT5G07300 Calcium-dependent phospholipid-binding Copine family
protein		 BONZAI 2 0.64 0.3 -0.33
106 AT3G31430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast
hits to 291 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.34 -0.33
107 AT5G06740 Concanavalin A-like lectin protein kinase family protein 0.64 0.32 -0.32
108 AT4G29740 cytokinin oxidase 4 ATCKX4, cytokinin oxidase 4 0.63 0.34 -0.31
109 AT3G09850 D111/G-patch domain-containing protein -0.63 0.31 -0.34
110 AT3G62960 Thioredoxin superfamily protein 0.63 0.3 -0.31
111 AT2G33070 nitrile specifier protein 2 NITRILE-SPECIFIER PROTEIN 2,
nitrile specifier protein 2		 -0.63 0.33 -0.31
112 AT5G19240 Glycoprotein membrane precursor GPI-anchored 0.63 0.31 -0.31
113 AT5G04210 CCCH-type zinc fingerfamily protein with RNA-binding domain 0.63 0.29 -0.3
114 AT5G37450 Leucine-rich repeat protein kinase family protein 0.63 0.34 -0.31
115 AT2G23340 DREB and EAR motif protein 3 DREB and EAR motif protein 3 0.63 0.31 -0.31
116 AT1G71030 MYB-like 2 ARABIDOPSIS MYB-LIKE 2, MYB-like 2 -0.63 0.34 -0.31
117 AT1G11910 aspartic proteinase A1 aspartic proteinase A1, ATAPA1 -0.63 0.32 -0.33
118 AT3G15670 Late embryogenesis abundant protein (LEA) family protein -0.63 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
119 C0227 Ribose D-Ribose D-Ribose ribose degradation,
guanosine nucleotides degradation I,
pyrimidine salvage pathway,
pyridine nucleotide cycling (plants),
adenine and adenosine salvage II,
guanosine nucleotides degradation II,
guanine and guanosine salvage II,
cis-zeatin biosynthesis,
adenosine nucleotides degradation I,
pyrimidine ribonucleosides degradation II 		-0.78 0.45 -0.44 C0227
120 C0010 myo-Inositol-1-phosphate D,L-myo-Inositol-1-phosphate 1D-myo-Inositol (3)-phosphate myo-inositol biosynthesis,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 		0.78 0.42 -0.45 C0010
121 C0252 Threonic acid D,L-Threonic acid L-Threonate ascorbic acid degradation 0.68 0.44 -0.44 C0252
122 C0239 Spermidine - Spermidine spermine biosynthesis,
spermine and spermidine degradation III,
beta-alanine biosynthesis I,
hypusine biosynthesis,
spermidine hydroxycinnamic acid conjugates biosynthesis,
spermidine biosynthesis I 		-0.64 0.44 -0.49 C0239
123 C0170 MST_2128.3 - - - 0.64 0.43 -0.44