AT4G28370 : -
Query Information
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AGICode AT4G28370
Description RING/U-box superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G28370 RING/U-box superfamily protein 1 0.31 -0.3
2 AT3G46960 RNA helicase, ATP-dependent, SK12/DOB1 protein 0.74 0.31 -0.3
3 AT1G44910 pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A,
pre-mRNA-processing protein 40A		 0.73 0.33 -0.33
4 AT4G18890 BES1/BZR1 homolog 3 BES1/BZR1 homolog 3 0.69 0.33 -0.3
5 AT5G59590 UDP-glucosyl transferase 76E2 UDP-glucosyl transferase 76E2 0.69 0.3 -0.33
6 AT4G35170 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.69 0.3 -0.31
7 AT2G22760 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.69 0.31 -0.34
8 AT3G51120 DNA binding;zinc ion binding;nucleic acid binding;nucleic
acid binding		 0.68 0.31 -0.32
9 AT5G26120 alpha-L-arabinofuranosidase 2 alpha-L-arabinofuranosidase 2,
ARABIDOPSIS THALIANA
ALPHA-L-ARABINOFURANOSIDASE 2		 -0.68 0.32 -0.31
10 AT1G19930 Galactose oxidase/kelch repeat superfamily protein 0.67 0.33 -0.32
11 AT5G26240 chloride channel D ATCLC-D, chloride channel D 0.66 0.33 -0.32
12 AT1G02540 unknown protein; Has 3327 Blast hits to 2216 proteins in
265 species: Archae - 18; Bacteria - 202; Metazoa - 802;
Fungi - 283; Plants - 84; Viruses - 187; Other Eukaryotes -
1751 (source: NCBI BLink).		 0.66 0.31 -0.31
13 AT1G36910 transposable element gene -0.65 0.33 -0.29
14 AT3G06250 FAR1-related sequence 7 FAR1-related sequence 7 0.65 0.34 -0.33
15 AT1G70180 Sterile alpha motif (SAM) domain-containing protein 0.64 0.32 -0.29
16 AT4G16280 RNA binding;abscisic acid binding FCA 0.64 0.31 -0.3
17 AT3G32300 transposable element gene -0.64 0.31 -0.3
18 AT1G09020 homolog of yeast sucrose nonfermenting 4 ATSNF4, homolog of yeast sucrose
nonfermenting 4		 0.64 0.32 -0.34
19 AT1G48360 zinc ion binding;nucleic acid binding;hydrolases, acting on
acid anhydrides, in phosphorus-containing anhydrides		 0.63 0.32 -0.3
20 AT3G44460 Basic-leucine zipper (bZIP) transcription factor family
protein		 basic leucine zipper transcription
factor 67, DPBF2		 0.63 0.3 -0.33
21 AT3G63180 TIC-like TICKLE, TIC-like 0.63 0.3 -0.31
22 AT3G44210 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43870.1); Has 15 Blast hits
to 15 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.31 -0.29
23 AT1G13540 Protein of unknown function (DUF1262) -0.63 0.32 -0.3
24 AT1G03410 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 2A6 0.63 0.32 -0.34
25 AT2G21470 SUMO-activating enzyme 2 SUMO-ACTIVATING ENZYME 2, EMBRYO
DEFECTIVE 2764, SUMO-activating
enzyme 2		 0.63 0.31 -0.33
26 AT2G44060 Late embryogenesis abundant protein, group 2 -0.63 0.3 -0.32
27 AT4G11950 Protein of unknown function (DUF1191) 0.63 0.33 -0.32
28 AT1G69170 Squamosa promoter-binding protein-like (SBP domain)
transcription factor family protein		 0.62 0.29 -0.33
29 AT1G27160 valyl-tRNA synthetase / valine--tRNA ligase-related -0.62 0.31 -0.3
30 AT5G61910 DCD (Development and Cell Death) domain protein 0.62 0.31 -0.33
31 AT5G64220 Calmodulin-binding transcription activator protein with
CG-1 and Ankyrin domains		 0.62 0.31 -0.3
32 AT2G35550 basic pentacysteine 7 BASIC PENTACYSTEINE 7, BBR, basic
pentacysteine 7		 0.62 0.3 -0.32
33 AT5G04120 Phosphoglycerate mutase family protein 0.62 0.31 -0.31
34 AT1G78940 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 0.62 0.3 -0.34
35 AT1G77300 histone methyltransferases(H3-K4 specific);histone
methyltransferases(H3-K36 specific)		 ASH1 HOMOLOG 2, CAROTENOID
CHLOROPLAST REGULATORY1, EARLY
FLOWERING IN SHORT DAYS, LAZARUS
2, SET DOMAIN GROUP 8		 0.62 0.31 -0.32
36 AT3G45810 ferric reductase-like transmembrane component family
protein		 0.62 0.32 -0.29
37 AT2G46000 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Mesoderm development candidate 2 (InterPro:IPR019330); Has
31 Blast hits to 31 proteins in 13 species: Archae - 0;
Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.3 -0.33
38 AT1G62260 mitochondrial editing factor 9 mitochondrial editing factor 9 0.61 0.32 -0.3
39 AT4G34500 Protein kinase superfamily protein -0.61 0.32 -0.28
40 AT1G29860 WRKY DNA-binding protein 71 WRKY DNA-BINDING PROTEIN 71, WRKY
DNA-binding protein 71		 -0.61 0.32 -0.3
41 AT1G51880 root hair specific 6 root hair specific 6 -0.61 0.32 -0.32
42 AT5G17720 alpha/beta-Hydrolases superfamily protein -0.6 0.33 -0.29
43 AT1G55660 FBD, F-box and Leucine Rich Repeat domains containing
protein		 -0.6 0.32 -0.35
44 AT2G41060 RNA-binding (RRM/RBD/RNP motifs) family protein 0.6 0.32 -0.3
45 AT2G44360 unknown protein; Has 23 Blast hits to 23 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.31 -0.32
46 AT4G05550 transposable element gene -0.6 0.32 -0.34
47 AT2G07650 transposable element gene 0.6 0.32 -0.31
48 AT3G43790 zinc induced facilitator-like 2 zinc induced facilitator-like 2 -0.6 0.3 -0.31
49 AT1G20120 GDSL-like Lipase/Acylhydrolase superfamily protein 0.59 0.3 -0.3
50 AT5G37970 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.59 0.31 -0.32
51 AT5G57260 cytochrome P450, family 71, subfamily B, polypeptide 10 cytochrome P450, family 71,
subfamily B, polypeptide 10		 -0.59 0.3 -0.32
52 AT5G19380 CRT (chloroquine-resistance transporter)-like transporter 1 CRT (chloroquine-resistance
transporter)-like transporter 1		 0.59 0.31 -0.31
53 AT4G23440 Disease resistance protein (TIR-NBS class) -0.59 0.32 -0.3
54 AT4G16447 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.59 0.35 -0.31
55 AT1G17350 NADH:ubiquinone oxidoreductase intermediate-associated
protein 30		 -0.59 0.31 -0.3
56 AT2G02400 NAD(P)-binding Rossmann-fold superfamily protein -0.59 0.32 -0.33
57 AT2G26420 1-phosphatidylinositol-4-phosphate 5-kinase 3 1-phosphatidylinositol-4-phosphate
5-kinase 3		 -0.59 0.33 -0.32
58 AT4G18410 transposable element gene 0.59 0.33 -0.31
59 AT1G15750 Transducin family protein / WD-40 repeat family protein TOPLESS, WUS-INTERACTING PROTEIN 1 0.59 0.3 -0.33
60 AT1G72060 serine-type endopeptidase inhibitors -0.58 0.31 -0.31
61 AT5G13390 no exine formation 1 NO EXINE FORMATION 1 0.58 0.33 -0.31
62 AT3G12640 RNA binding (RRM/RBD/RNP motifs) family protein 0.58 0.31 -0.3
63 AT1G71090 Auxin efflux carrier family protein -0.58 0.31 -0.34
64 AT2G04340 unknown protein; Has 24 Blast hits to 24 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.58 0.31 -0.31
65 AT2G41520 Heat shock protein DnaJ with tetratricopeptide repeat tetratricopeptide repeat 15 0.58 0.31 -0.3
66 AT1G15220 cytochrome c biogenesis protein family ATCCMH, CCMH -0.57 0.3 -0.31
67 AT5G15725 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root; Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.57 0.31 -0.32
68 AT2G01700 transposable element gene -0.57 0.32 -0.31
69 AT1G09290 unknown protein; Has 73 Blast hits to 71 proteins in 26
species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 11;
Plants - 54; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.56 0.31 -0.31
70 AT1G24240 Ribosomal protein L19 family protein -0.56 0.32 -0.29
71 AT3G28280 BEST Arabidopsis thaliana protein match is: F-box family
protein-related (TAIR:AT3G28330.1); Has 103 Blast hits to
100 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.31 -0.31
72 AT5G51270 U-box domain-containing protein kinase family protein -0.55 0.3 -0.33
73 AT5G39080 HXXXD-type acyl-transferase family protein -0.55 0.31 -0.32
74 AT5G43480 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.55 0.29 -0.31
75 AT2G05950 transposable element gene -0.55 0.31 -0.33
76 AT5G66640 DA1-related protein 3 DA1-related protein 3 -0.55 0.31 -0.32
77 AT1G51360 dimeric A/B barrel domainS-protein 1 DIMERIC A/B BARREL DOMAINS-PROTEIN
1, dimeric A/B barrel
domainS-protein 1		 -0.54 0.34 -0.31
78 AT1G01670 RING/U-box superfamily protein -0.53 0.31 -0.31
79 AT1G74320 Protein kinase superfamily protein -0.53 0.3 -0.33
80 AT3G02770 Ribonuclease E inhibitor RraA/Dimethylmenaquinone
methyltransferase		 -0.53 0.31 -0.3
81 AT5G64790 O-Glycosyl hydrolases family 17 protein -0.53 0.3 -0.32
82 AT5G34830 unknown protein; Has 19 Blast hits to 19 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0;
Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.53 0.29 -0.3