AT4G28025 : -
Query Information
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AGICode AT4G28025
Description unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G28025 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 1 0.31 -0.33
2 AT1G25290 RHOMBOID-like protein 10 RHOMBOID-like protein 10,
RHOMBOID-like protein 10		 0.82 0.31 -0.31
3 AT2G04700 ferredoxin thioredoxin reductase catalytic beta chain
family protein		 0.79 0.31 -0.34
4 AT3G10230 lycopene cyclase AtLCY, lycopene cyclase 0.77 0.33 -0.32
5 AT2G33255 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.77 0.31 -0.29
6 AT4G37200 Thioredoxin superfamily protein HIGH CHLOROPHYLL FLUORESCENCE 164 0.77 0.3 -0.31
7 AT3G26085 CAAX amino terminal protease family protein 0.76 0.3 -0.32
8 AT1G64430 Pentatricopeptide repeat (PPR) superfamily protein 0.76 0.31 -0.31
9 AT3G58140 phenylalanyl-tRNA synthetase class IIc family protein 0.76 0.31 -0.32
10 AT4G33670 NAD(P)-linked oxidoreductase superfamily protein 0.76 0.31 -0.3
11 AT5G66090 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN:
21 plant structures; EXPRESSED DURING: 13 growth stages;
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.76 0.31 -0.3
12 AT4G33500 Protein phosphatase 2C family protein 0.75 0.33 -0.29
13 AT3G53920 RNApolymerase sigma-subunit C SIGMA FACTOR 3, RNApolymerase
sigma-subunit C		 0.75 0.32 -0.33
14 AT5G04140 glutamate synthase 1 FERREDOXIN-DEPENDENT GLUTAMATE
SYNTHASE, FERREDOXIN-DEPENDENT
GLUTAMATE SYNTHASE 1, glutamate
synthase 1, GLUS		 0.75 0.31 -0.29
15 ATCG00630 PSAJ PSAJ 0.74 0.3 -0.31
16 AT1G07110 fructose-2,6-bisphosphatase ATF2KP,
fructose-2,6-bisphosphatase, FKFBP		 0.74 0.3 -0.32
17 AT2G01220 Nucleotidylyl transferase superfamily protein 0.74 0.31 -0.33
18 AT1G75010 GTP binding ACCUMULATION AND REPLICATION OF
CHLOROPLASTS 3		 0.74 0.32 -0.31
19 AT1G31800 cytochrome P450, family 97, subfamily A, polypeptide 3 cytochrome P450, family 97,
subfamily A, polypeptide 3, LUTEIN
DEFICIENT 5		 0.74 0.32 -0.33
20 AT5G61830 NAD(P)-binding Rossmann-fold superfamily protein 0.74 0.34 -0.31
21 AT5G18100 copper/zinc superoxide dismutase 3 copper/zinc superoxide dismutase 3 0.73 0.35 -0.31
22 AT1G50840 polymerase gamma 2 polymerase gamma 2, polymerase I A 0.72 0.3 -0.3
23 AT5G58330 lactate/malate dehydrogenase family protein 0.72 0.32 -0.31
24 AT1G65260 plastid transcriptionally active 4 plastid transcriptionally active
4, VESICLE-INDUCING PROTEIN IN
PLASTIDS 1		 0.71 0.31 -0.32
25 AT1G31190 myo-inositol monophosphatase like 1 myo-inositol monophosphatase like
1		 0.71 0.32 -0.3
26 AT5G03880 Thioredoxin family protein 0.71 0.29 -0.33
27 AT2G02410 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF901 (InterPro:IPR010298); Has 1151
Blast hits to 1151 proteins in 597 species: Archae - 0;
Bacteria - 1105; Metazoa - 0; Fungi - 0; Plants - 42;
Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).		 0.71 0.32 -0.31
28 AT1G65070 DNA mismatch repair protein MutS, type 2 0.71 0.33 -0.31
29 AT2G38780 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; Has 58 Blast hits to 58 proteins
in 23 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi
- 0; Plants - 44; Viruses - 0; Other Eukaryotes - 9
(source: NCBI BLink).		 0.7 0.31 -0.32
30 AT3G57770 Protein kinase superfamily protein 0.7 0.32 -0.31
31 AT2G45740 peroxin 11D peroxin 11D 0.7 0.32 -0.29
32 AT3G17930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF3007
(InterPro:IPR021562); Has 236 Blast hits to 236 proteins in
83 species: Archae - 0; Bacteria - 117; Metazoa - 0; Fungi
- 0; Plants - 39; Viruses - 0; Other Eukaryotes - 80
(source: NCBI BLink).		 0.7 0.31 -0.32
33 AT2G04230 FBD, F-box and Leucine Rich Repeat domains containing
protein		 0.69 0.3 -0.33
34 AT1G71490 Tetratricopeptide repeat (TPR)-like superfamily protein 0.69 0.33 -0.31
35 AT1G73990 signal peptide peptidase signal peptide peptidase, SPPA1 0.69 0.31 -0.29
36 AT5G63060 Sec14p-like phosphatidylinositol transfer family protein 0.69 0.29 -0.34
37 AT3G19900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3067 (InterPro:IPR021420);
Has 276 Blast hits to 276 proteins in 83 species: Archae -
0; Bacteria - 112; Metazoa - 0; Fungi - 2; Plants - 59;
Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink).		 0.69 0.3 -0.32
38 AT4G01510 Arv1-like protein ARV2 0.69 0.31 -0.33
39 AT2G23420 nicotinate phosphoribosyltransferase 2 nicotinate
phosphoribosyltransferase 2		 0.68 0.31 -0.33
40 AT1G28090 Polynucleotide adenylyltransferase family protein 0.68 0.33 -0.3
41 AT3G56300 Cysteinyl-tRNA synthetase, class Ia family protein 0.68 0.31 -0.3
42 AT3G16175 Thioesterase superfamily protein 0.68 0.31 -0.31
43 AT2G19940 oxidoreductases, acting on the aldehyde or oxo group of
donors, NAD or NADP as acceptor;copper ion binding		 0.68 0.33 -0.31
44 AT5G60600 4-hydroxy-3-methylbut-2-enyl diphosphate synthase CHLOROPLAST BIOGENESIS 4,
CONSTITUTIVE SUBTILISIN 3, GCPE,
4-hydroxy-3-methylbut-2-enyl
diphosphate synthase, ISPG		 0.68 0.34 -0.3
45 AT1G17100 SOUL heme-binding family protein 0.68 0.3 -0.33
46 AT4G13200 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast,
plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 97 Blast hits to 97 proteins
in 46 species: Archae - 0; Bacteria - 65; Metazoa - 2;
Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 2
(source: NCBI BLink).		 0.68 0.31 -0.3
47 AT1G32540 lsd one like 1 lsd one like 1 0.67 0.32 -0.33
48 AT3G16220 Predicted eukaryotic LigT 0.67 0.28 -0.31
49 AT3G42630 Pentatricopeptide repeat (PPR) superfamily protein 0.67 0.33 -0.29
50 AT2G38900 Serine protease inhibitor, potato inhibitor I-type family
protein		 0.67 0.32 -0.3
51 AT4G29270 HAD superfamily, subfamily IIIB acid phosphatase -0.65 0.32 -0.33
52 AT3G02940 myb domain protein 107 myb domain protein 107, myb domain
protein 107		 -0.65 0.31 -0.31
53 AT4G00820 IQ-domain 17 IQ-domain 17 -0.64 0.31 -0.33
54 AT4G15230 pleiotropic drug resistance 2 ATP-binding cassette G30, ATPDR2,
pleiotropic drug resistance 2		 -0.63 0.31 -0.31
55 AT4G37400 cytochrome P450, family 81, subfamily F, polypeptide 3 cytochrome P450, family 81,
subfamily F, polypeptide 3		 -0.63 0.3 -0.31
56 AT1G73160 UDP-Glycosyltransferase superfamily protein -0.62 0.3 -0.31
57 AT3G05890 Low temperature and salt responsive protein family RARE-COLD-INDUCIBLE 2B -0.62 0.32 -0.31
58 AT3G20130 cytochrome P450, family 705, subfamily A, polypeptide 22 cytochrome P450, family 705,
subfamily A, polypeptide 22,
gravity persistence signal 1		 -0.61 0.3 -0.31
59 AT5G13520 peptidase M1 family protein -0.6 0.31 -0.32
60 AT2G47460 myb domain protein 12 MYB DOMAIN PROTEIN 12, myb domain
protein 12, PRODUCTION OF FLAVONOL
GLYCOSIDES 1		 -0.6 0.34 -0.32
61 AT1G27140 glutathione S-transferase tau 14 glutathione S-transferase tau 14,
GLUTATHIONE S-TRANSFERASE 13,
glutathione S-transferase tau 14		 -0.6 0.31 -0.33
62 AT1G76090 sterol methyltransferase 3 sterol methyltransferase 3 -0.6 0.3 -0.32
63 AT1G08500 early nodulin-like protein 18 AtENODL18, early nodulin-like
protein 18		 -0.59 0.33 -0.32
64 AT3G15240 Serine/threonine-protein kinase WNK (With No
Lysine)-related		 -0.59 0.3 -0.31
65 AT5G12970 Calcium-dependent lipid-binding (CaLB domain) plant
phosphoribosyltransferase family protein		 -0.59 0.32 -0.31
66 AT2G23060 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.59 0.32 -0.3
67 AT5G61030 glycine-rich RNA-binding protein 3 glycine-rich RNA-binding protein 3 -0.59 0.32 -0.32
68 AT2G18500 ovate family protein 7 ARABIDOPSIS THALIANA OVATE FAMILY
PROTEIN 7, ovate family protein 7		 -0.59 0.32 -0.34
69 AT5G45920 SGNH hydrolase-type esterase superfamily protein -0.59 0.3 -0.34
70 AT3G25110 fatA acyl-ACP thioesterase fatA acyl-ACP thioesterase, fatA
acyl-ACP thioesterase		 -0.58 0.33 -0.31
71 AT5G10720 histidine kinase 5 histidine kinase 5, CYTOKININ
INDEPENDENT 2, histidine kinase 5		 -0.58 0.33 -0.34
72 AT3G26750 CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme
E2C-binding protein (InterPro:IPR019193); Has 26 Blast hits
to 25 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.34 -0.32
73 AT3G20840 Integrase-type DNA-binding superfamily protein PLETHORA 1 -0.58 0.33 -0.32
74 AT1G28130 Auxin-responsive GH3 family protein GH3.17 -0.57 0.29 -0.32
75 AT5G64710 Putative endonuclease or glycosyl hydrolase -0.57 0.32 -0.31
76 AT5G54020 Cysteine/Histidine-rich C1 domain family protein -0.57 0.31 -0.32
77 AT3G47400 Plant invertase/pectin methylesterase inhibitor superfamily -0.57 0.31 -0.31
78 AT4G14695 Uncharacterised protein family (UPF0041) -0.57 0.35 -0.31
79 AT4G11880 AGAMOUS-like 14 AGAMOUS-like 14 -0.56 0.32 -0.32
80 AT3G50870 GATA type zinc finger transcription factor family protein GATA TRANSCRIPTION FACTOR 18,
HANABA TANARU, MONOPOLE		 -0.56 0.31 -0.31
81 AT3G56110 prenylated RAB acceptor 1.B1 prenylated RAB acceptor 1.B1 -0.56 0.33 -0.31
82 AT5G14020 Endosomal targeting BRO1-like domain-containing protein -0.56 0.3 -0.31
83 AT4G31320 SAUR-like auxin-responsive protein family -0.55 0.3 -0.34
84 AT5G65390 arabinogalactan protein 7 arabinogalactan protein 7 -0.55 0.31 -0.34
85 AT5G58780 Undecaprenyl pyrophosphate synthetase family protein -0.55 0.32 -0.32
86 AT5G56540 arabinogalactan protein 14 arabinogalactan protein 14,
ATAGP14		 -0.55 0.31 -0.3
87 AT1G34280 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.54 0.3 -0.33
88 AT2G25640 SPOC domain / Transcription elongation factor S-II protein -0.54 0.31 -0.3
89 AT5G65800 ACC synthase 5 ACC synthase 5, ATACS5,
CYTOKININ-INSENSITIVE 5, ETHYLENE
OVERPRODUCER 2		 -0.54 0.3 -0.34
90 AT4G12270 Copper amine oxidase family protein -0.54 0.3 -0.33
91 AT3G50640 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G66800.1); Has 67 Blast hits
to 67 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.53 0.31 -0.31
92 AT3G09220 laccase 7 laccase 7 -0.53 0.31 -0.31
93 AT2G21060 glycine-rich protein 2B COLD SHOCK DOMAIN PROTEIN 4,
glycine-rich protein 2B,
glycine-rich protein 2B		 -0.53 0.29 -0.34
94 AT2G28460 Cysteine/Histidine-rich C1 domain family protein -0.53 0.29 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
95 C0181 MST_2904.3 - - - -0.6 0.46 -0.47
96 C0238 Sitosterol 3-O-β-D-glucoside - 3-O-β-D-Glucosyl-β-sitosterol sphingolipid biosynthesis -0.6 0.36 -0.34 C0238
97 C0064 Campesterol 3-O-β-D-glucoside - - - -0.52 0.33 -0.33