AT4G27880 : -
Query Information
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AGICode AT4G27880
Description Protein with RING/U-box and TRAF-like domains
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G27880 Protein with RING/U-box and TRAF-like domains 1 0.32 -0.32
2 AT3G26640 Transducin/WD40 repeat-like superfamily protein LIGHT-REGULATED WD 2 0.76 0.32 -0.31
3 AT3G57340 Heat shock protein DnaJ, N-terminal with domain of unknown
function (DUF1977)		 0.73 0.31 -0.31
4 AT2G47970 Nuclear pore localisation protein NPL4 0.72 0.3 -0.34
5 AT1G19120 Small nuclear ribonucleoprotein family protein 0.71 0.31 -0.33
6 AT1G11900 Tetratricopeptide repeat (TPR)-like superfamily protein 0.71 0.3 -0.33
7 AT5G10790 ubiquitin-specific protease 22 ubiquitin-specific protease 22 0.71 0.33 -0.31
8 AT1G06390 GSK3/SHAGGY-like protein kinase 1 ATGSK1, A. THALIANA SHAGGY-LIKE
KINASE GROUP 2 3, SHAGGY-LIKE
PROTEIN KINASE 22, BIN2-LIKE 2,
GSK3/SHAGGY-like protein kinase 1,
SHAGGY-LIKE PROTEIN KINASE 22		 0.71 0.31 -0.32
9 AT1G33230 TMPIT-like protein 0.7 0.31 -0.29
10 AT3G09320 DHHC-type zinc finger family protein 0.69 0.29 -0.32
11 AT1G68790 little nuclei3 CROWDED NUCLEI 3, LITTLE NUCLEI3 -0.69 0.31 -0.32
12 AT5G14240 Thioredoxin superfamily protein 0.69 0.3 -0.32
13 AT1G51600 ZIM-LIKE 2 GATA TRANSCRIPTION FACTOR 28,
TIFY2A, ZIM-LIKE 2		 0.69 0.29 -0.32
14 AT2G15440 Protein of unknown function (DUF579) -0.69 0.32 -0.32
15 AT3G61580 Fatty acid/sphingolipid desaturase AtSLD1, sphingoid LCB desaturase 1 0.68 0.31 -0.31
16 AT4G23040 Ubiquitin-like superfamily protein 0.67 0.31 -0.34
17 AT4G18260 Cytochrome b561/ferric reductase transmembrane protein
family		 0.66 0.3 -0.32
18 AT4G19850 lectin-related ARABIDOPSIS THALIANA PHLOEM
PROTEIN 2-A2, phloem protein 2-A2,
PP2A2		 0.66 0.29 -0.31
19 AT3G15390 silencing defective 5 silencing defective 5 -0.66 0.32 -0.33
20 AT3G51550 Malectin/receptor-like protein kinase family protein FERONIA 0.65 0.32 -0.3
21 AT4G27750 binding IMPAIRED SUCROSE INDUCTION 1 0.65 0.32 -0.33
22 AT1G54310 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.65 0.32 -0.34
23 AT5G62350 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.64 0.34 -0.3
24 AT3G25210 Tetratricopeptide repeat (TPR)-like superfamily protein 0.64 0.32 -0.34
25 AT5G13970 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G13310.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.64 0.32 -0.32
26 AT4G26290 unknown protein; Has 9 Blast hits to 9 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 4 (source: NCBI
BLink).		 0.64 0.34 -0.3
27 AT4G21110 G10 family protein 0.64 0.32 -0.32
28 AT4G12640 RNA recognition motif (RRM)-containing protein 0.64 0.31 -0.32
29 AT2G38450 CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G05360.1); Has 88 Blast hits to 88 proteins in 25
species: Archae - 0; Bacteria - 16; Metazoa - 0; Fungi - 0;
Plants - 70; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.63 0.31 -0.32
30 AT3G21960 Receptor-like protein kinase-related family protein 0.63 0.32 -0.33
31 AT2G15930 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.63 0.31 -0.32
32 AT3G05850 transposable element gene 0.63 0.3 -0.3
33 AT3G48950 Pectin lyase-like superfamily protein -0.63 0.3 -0.31
34 AT3G07740 homolog of yeast ADA2 2A homolog of yeast ADA2 2A, ATADA2A,
HAC10, HXA02, HXA2		 0.62 0.32 -0.33
35 AT3G57920 squamosa promoter binding protein-like 15 squamosa promoter binding
protein-like 15		 -0.62 0.3 -0.32
36 AT3G11210 SGNH hydrolase-type esterase superfamily protein 0.62 0.33 -0.32
37 AT5G43670 Sec23/Sec24 protein transport family protein 0.61 0.31 -0.3
38 AT3G16830 TOPLESS-related 2 TOPLESS-related 2 0.61 0.32 -0.29
39 AT5G67530 plant U-box 49 PLANT U-BOX 49, plant U-box 49 0.61 0.33 -0.31
40 AT1G34545 transposable element gene -0.61 0.3 -0.32
41 AT5G42000 ORMDL family protein 0.61 0.33 -0.32
42 AT1G77850 auxin response factor 17 auxin response factor 17 0.61 0.31 -0.3
43 AT1G19040 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 0.6 0.33 -0.32
44 AT1G75420 UDP-Glycosyltransferase superfamily protein 0.6 0.32 -0.32
45 AT1G55530 RING/U-box superfamily protein 0.6 0.32 -0.32
46 AT1G02450 NIM1-interacting 1 NIMIN-1, NIM1-interacting 1 -0.59 0.31 -0.3
47 AT2G18350 homeobox protein 24 homeobox protein 24, homeobox
protein 24, ZINC FINGER
HOMEODOMAIN 6		 0.59 0.31 -0.31
48 AT4G17245 RING/U-box superfamily protein 0.59 0.35 -0.29
49 AT1G01990 unknown protein; Has 32 Blast hits to 32 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.59 0.31 -0.31
50 AT3G18030 HAL3-like protein A ATHAL3, ARABIDOPSIS THALIANA
HAL3-LIKE PROTEIN A, HALOTOLERANCE
DETERMINANT 3, HAL3-like protein A		 0.59 0.32 -0.3
51 AT5G61250 glucuronidase 1 glucuronidase 1, glucuronidase 1 -0.59 0.31 -0.33
52 AT5G11800 K+ efflux antiporter 6 ARABIDOPSIS THALIANA K+ EFFLUX
ANTIPORTER 6, K+ efflux antiporter
6		 0.58 0.32 -0.29
53 AT2G24330 Protein of unknown function (DUF2296) 0.58 0.29 -0.31
54 AT4G05150 Octicosapeptide/Phox/Bem1p family protein 0.58 0.29 -0.32
55 AT5G06280 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.58 0.32 -0.3
56 AT3G12920 SBP (S-ribonuclease binding protein) family protein BOI-related gene 3 0.58 0.31 -0.3
57 AT1G30900 VACUOLAR SORTING RECEPTOR 6 binding protein of 80 kDa 3;3,
VACUOLAR SORTING RECEPTOR 3;3,
VACUOLAR SORTING RECEPTOR 6		 -0.57 0.33 -0.31
58 AT5G24150 FAD/NAD(P)-binding oxidoreductase family protein SQUALENE MONOOXYGENASE 5, SQP1 -0.57 0.32 -0.31
59 AT2G07110 BEST Arabidopsis thaliana protein match is: Ribosomal
protein S5 domain 2-like superfamily protein
(TAIR:AT3G46210.6); Has 82 Blast hits to 82 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2;
Plants - 75; Viruses - 0; Other Eukaryotes - 5 (source:
NCBI BLink).		 -0.57 0.33 -0.33
60 AT3G25170 ralf-like 26 ralf-like 26 -0.55 0.32 -0.31
61 AT4G33740 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G37820.1); Has 138210 Blast
hits to 73191 proteins in 2959 species: Archae - 732;
Bacteria - 18006; Metazoa - 48521; Fungi - 16820; Plants -
7078; Viruses - 1046; Other Eukaryotes - 46007 (source:
NCBI BLink).		 -0.55 0.3 -0.31
62 AT1G68040 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.55 0.32 -0.33
63 AT5G38580 FBD-like domain family protein -0.54 0.32 -0.32
64 AT1G32980 Subtilisin-like serine endopeptidase family protein -0.54 0.33 -0.3
65 AT4G18090 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.53 0.31 -0.3
66 AT1G24000 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.52 0.33 -0.31
67 AT4G29250 HXXXD-type acyl-transferase family protein -0.52 0.33 -0.33
68 AT3G20480 tetraacyldisaccharide 4'-kinase family protein AtLpxK, lipid X K -0.51 0.31 -0.29
69 AT2G10880 transposable element gene -0.51 0.32 -0.31
70 AT3G54610 histone acetyltransferase of the GNAT family 1 BIG TOP, general control
non-repressible 5, HAC3, HAG01,
histone acetyltransferase of the
GNAT family 1, HISTONE
ACETYLTRANSFERASE 1		 -0.51 0.32 -0.32
71 AT4G20000 VQ motif-containing protein -0.51 0.3 -0.32
72 AT1G71696 carboxypeptidase D, putative SUPPRESSOR OF LLP1 1 -0.49 0.32 -0.31