AT4G27600 : GENES NECESSARY FOR THE ACHIEVEMENT OF RUBISCO ACCUMULATION 5.....
Query Information
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AGICode AT4G27600
Description pfkB-like carbohydrate kinase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G27600 pfkB-like carbohydrate kinase family protein GENES NECESSARY FOR THE
ACHIEVEMENT OF RUBISCO
ACCUMULATION 5		 1 0.29 -0.33
2 AT1G01080 RNA-binding (RRM/RBD/RNP motifs) family protein 0.92 0.33 -0.32
3 AT3G13120 Ribosomal protein S10p/S20e family protein 0.92 0.31 -0.33
4 AT5G11480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.91 0.33 -0.32
5 AT4G39620 Tetratricopeptide repeat (TPR)-like superfamily protein A. THALIANA PENTATRICOPEPTIDE
REPEAT 5, EMBRYO DEFECTIVE 2453		 0.91 0.31 -0.31
6 AT1G64510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.91 0.32 -0.34
7 AT3G10500 NAC domain containing protein 53 NAC domain containing protein 53,
NAC domain containing protein 53		 -0.91 0.34 -0.3
8 AT3G29185 Domain of unknown function (DUF3598) 0.9 0.31 -0.33
9 AT3G14760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 6 plant structures;
EXPRESSED DURING: LP.04 four leaves visible, LP.02 two
leaves visible; Has 63 Blast hits to 63 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.9 0.32 -0.33
10 AT3G18680 Amino acid kinase family protein 0.9 0.33 -0.32
11 AT1G48350 Ribosomal L18p/L5e family protein EMBRYO DEFECTIVE 3105 0.9 0.3 -0.3
12 AT5G47190 Ribosomal protein L19 family protein 0.9 0.32 -0.3
13 AT2G40490 Uroporphyrinogen decarboxylase HEME2 0.89 0.3 -0.32
14 AT3G54210 Ribosomal protein L17 family protein 0.89 0.33 -0.31
15 AT1G17200 Uncharacterised protein family (UPF0497) 0.89 0.31 -0.29
16 AT4G39040 RNA-binding CRS1 / YhbY (CRM) domain protein 0.89 0.3 -0.32
17 AT4G16410 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF751 (InterPro:IPR008470); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.89 0.32 -0.33
18 AT3G62060 Pectinacetylesterase family protein 0.89 0.31 -0.31
19 AT5G13140 Pollen Ole e 1 allergen and extensin family protein 0.89 0.29 -0.3
20 AT5G08280 hydroxymethylbilane synthase hydroxymethylbilane synthase 0.89 0.3 -0.32
21 AT1G64355 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3593 (InterPro:IPR021995);
Has 301 Blast hits to 301 proteins in 96 species: Archae -
0; Bacteria - 143; Metazoa - 0; Fungi - 0; Plants - 44;
Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).		 0.89 0.3 -0.33
22 AT2G33800 Ribosomal protein S5 family protein EMBRYO DEFECTIVE 3113 0.89 0.31 -0.32
23 AT3G05600 alpha/beta-Hydrolases superfamily protein 0.89 0.31 -0.32
24 AT3G32930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.89 0.32 -0.31
25 AT5G52960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3143 (InterPro:IPR021489);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.88 0.32 -0.32
26 AT3G23760 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: vacuole; EXPRESSED
IN: 20 plant structures; EXPRESSED DURING: 13 growth
stages; BEST Arabidopsis thaliana protein match is:
transferases, transferring glycosyl groups
(TAIR:AT4G14100.1); Has 108 Blast hits to 104 proteins in
19 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi -
0; Plants - 90; Viruses - 0; Other Eukaryotes - 10 (source:
NCBI BLink).		 0.88 0.31 -0.3
27 AT3G14930 Uroporphyrinogen decarboxylase HEME1 0.88 0.34 -0.3
28 AT2G30890 Cytochrome b561/ferric reductase transmembrane protein
family		 0.88 0.31 -0.33
29 AT1G26220 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.88 0.34 -0.32
30 AT3G20230 Ribosomal L18p/L5e family protein 0.88 0.31 -0.33
31 AT3G14110 Tetratricopeptide repeat (TPR)-like superfamily protein FLUORESCENT IN BLUE LIGHT 0.88 0.33 -0.3
32 AT5G38290 Peptidyl-tRNA hydrolase family protein 0.88 0.29 -0.33
33 AT4G10300 RmlC-like cupins superfamily protein 0.88 0.31 -0.33
34 AT5G02710 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Uncharacterised protein family
UPF0153 (InterPro:IPR005358); Has 240 Blast hits to 240
proteins in 73 species: Archae - 10; Bacteria - 110;
Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other
Eukaryotes - 95 (source: NCBI BLink).		 0.88 0.32 -0.29
35 AT1G44920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3054 (InterPro:IPR021414);
Has 246 Blast hits to 246 proteins in 119 species: Archae -
14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45;
Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).		 0.87 0.34 -0.29
36 AT4G38490 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.87 0.31 -0.34
37 AT3G06840 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G49170.1); Has 33 Blast hits
to 33 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.87 0.32 -0.3
38 AT3G09580 FAD/NAD(P)-binding oxidoreductase family protein 0.87 0.31 -0.34
39 AT1G67700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 49
Blast hits to 49 proteins in 20 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses
- 0; Other Eukaryotes - 5 (source: NCBI BLink).		 0.87 0.31 -0.33
40 AT1G75350 Ribosomal protein L31 embryo defective 2184 0.87 0.32 -0.32
41 AT2G35780 serine carboxypeptidase-like 26 serine carboxypeptidase-like 26 0.87 0.31 -0.32
42 AT2G47450 chloroplast signal recognition particle component (CAO) CHAOS, CHLOROPLAST SIGNAL
RECOGNITION PARTICLE 43		 0.86 0.32 -0.32
43 AT3G20680 Domain of unknown function (DUF1995) 0.86 0.3 -0.3
44 AT1G73110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.86 0.33 -0.33
45 AT4G37110 Zinc-finger domain of monoamine-oxidase A repressor R1 0.86 0.3 -0.32
46 AT5G09995 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G08530.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.86 0.33 -0.31
47 AT1G10960 ferredoxin 1 ferredoxin 1, ferredoxin 1 0.86 0.3 -0.32
48 AT1G26570 UDP-glucose dehydrogenase 1 UDP-GLUCOSE DEHYDROGENASE 1,
UDP-glucose dehydrogenase 1		 0.86 0.33 -0.32
49 AT3G25805 unknown protein; Has 98 Blast hits to 98 proteins in 45
species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0;
Plants - 43; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.86 0.32 -0.35
50 AT1G22700 Tetratricopeptide repeat (TPR)-like superfamily protein 0.86 0.33 -0.31
51 AT3G18870 Mitochondrial transcription termination factor family
protein		 0.85 0.31 -0.29
52 AT2G47910 chlororespiratory reduction 6 chlororespiratory reduction 6 0.85 0.32 -0.31
53 AT4G14870 secE/sec61-gamma protein transport protein SECE1 0.85 0.33 -0.3
54 AT5G52440 Bacterial sec-independent translocation protein mttA/Hcf106 HIGH CHLOROPHYLL FLUORESCENCE 106 0.85 0.33 -0.32
55 AT5G16030 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G02500.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.85 0.31 -0.34
56 AT1G11850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 12 growth stages; Has 38777 Blast hits to
8185 proteins in 741 species: Archae - 46; Bacteria -
14846; Metazoa - 13013; Fungi - 1392; Plants - 5894;
Viruses - 543; Other Eukaryotes - 3043 (source: NCBI
BLink).		 0.85 0.31 -0.31
57 AT5G20040 isopentenyltransferase 9 ARABIDOPSIS THALIANA
ISOPENTENYLTRANSFERASE 9,
isopentenyltransferase 9		 0.85 0.32 -0.32
58 AT1G79720 Eukaryotic aspartyl protease family protein 0.85 0.31 -0.3
59 AT2G41220 glutamate synthase 2 glutamate synthase 2 -0.85 0.32 -0.33
60 AT5G19290 alpha/beta-Hydrolases superfamily protein 0.85 0.35 -0.31
61 AT3G07200 RING/U-box superfamily protein 0.85 0.32 -0.31
62 AT3G45050 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 26 Blast hits to 26 proteins
in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.85 0.33 -0.33
63 AT2G32765 small ubiquitinrelated modifier 5 ATSUMO5, SUMO 5, small
ubiquitinrelated modifier 5		 0.84 0.33 -0.31
64 AT4G17810 C2H2 and C2HC zinc fingers superfamily protein 0.84 0.35 -0.32
65 AT1G18170 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.84 0.33 -0.33
66 AT5G64620 cell wall / vacuolar inhibitor of fructosidase 2 CELL WALL / VACUOLAR INHIBITOR OF
FRUCTOSIDASE 2, cell wall /
vacuolar inhibitor of fructosidase
2		 0.84 0.29 -0.32
67 AT3G25860 2-oxoacid dehydrogenases acyltransferase family protein LTA2, PLASTID E2 SUBUNIT OF
PYRUVATE DECARBOXYLASE		 0.84 0.32 -0.3
68 AT4G26555 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.84 0.33 -0.31
69 AT1G56190 Phosphoglycerate kinase family protein 0.84 0.31 -0.3
70 AT1G73655 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.84 0.32 -0.3
71 AT1G20340 Cupredoxin superfamily protein DNA-DAMAGE-REPAIR/TOLERATION
PROTEIN 112, PLASTOCYANIN 2		 0.84 0.32 -0.32
72 AT3G19810 Protein of unknown function (DUF177) 0.84 0.33 -0.32
73 AT5G15210 homeobox protein 30 homeobox protein 30, homeobox
protein 30, ZINC FINGER
HOMEODOMAIN 3, ZINC FINGER
HOMEODOMAIN 8		 0.84 0.34 -0.32
74 AT3G51470 Protein phosphatase 2C family protein 0.84 0.33 -0.32
75 AT1G63840 RING/U-box superfamily protein -0.83 0.3 -0.32
76 AT3G16340 pleiotropic drug resistance 1 ATP-binding cassette G29,
PLEIOTROPIC DRUG RESISTANCE 1,
pleiotropic drug resistance 1		 -0.81 0.31 -0.31
77 AT1G17170 glutathione S-transferase TAU 24 glutathione S-transferase TAU 24,
Arabidopsis thaliana Glutathione
S-transferase (class tau) 24,
glutathione S-transferase TAU 24		 -0.81 0.3 -0.32
78 AT4G18360 Aldolase-type TIM barrel family protein -0.81 0.34 -0.31
79 AT2G41380 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.8 0.31 -0.31
80 AT5G63970 Copine (Calcium-dependent phospholipid-binding protein)
family		 -0.8 0.32 -0.32
81 AT5G49280 hydroxyproline-rich glycoprotein family protein -0.8 0.31 -0.31
82 AT1G62300 WRKY family transcription factor ATWRKY6, WRKY6 -0.8 0.31 -0.31
83 AT2G39350 ABC-2 type transporter family protein ATP-binding cassette G1 -0.8 0.3 -0.33
84 AT3G23560 MATE efflux family protein ABERRANT LATERAL ROOT FORMATION 5 -0.78 0.31 -0.32
85 AT1G72700 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.78 0.31 -0.33
86 AT1G76790 O-methyltransferase family protein indole glucosinolate
O-methyltransferase 5		 -0.76 0.32 -0.29
87 AT1G63440 heavy metal atpase 5 heavy metal atpase 5 -0.76 0.34 -0.32
88 AT5G67340 ARM repeat superfamily protein -0.76 0.32 -0.31
89 AT5G24090 chitinase A chitinase A, chitinase A -0.76 0.3 -0.32
90 AT1G78340 glutathione S-transferase TAU 22 glutathione S-transferase TAU 22,
glutathione S-transferase TAU 22		 -0.76 0.33 -0.3
91 AT4G15610 Uncharacterised protein family (UPF0497) -0.76 0.31 -0.32
92 AT5G16680 RING/FYVE/PHD zinc finger superfamily protein -0.76 0.32 -0.28
93 AT1G05680 Uridine diphosphate glycosyltransferase 74E2 Uridine diphosphate
glycosyltransferase 74E2		 -0.75 0.3 -0.32
94 AT1G62570 flavin-monooxygenase glucosinolate S-oxygenase 4 flavin-monooxygenase glucosinolate
S-oxygenase 4		 -0.75 0.32 -0.33
95 AT4G11670 Protein of unknown function (DUF810) -0.75 0.32 -0.31
96 AT1G50570 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.74 0.32 -0.34
97 AT1G13340 Regulator of Vps4 activity in the MVB pathway protein -0.74 0.32 -0.32
98 AT1G35260 MLP-like protein 165 MLP-like protein 165 -0.74 0.31 -0.29
99 AT5G59490 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.74 0.3 -0.32
100 AT1G30620 NAD(P)-binding Rossmann-fold superfamily protein HIGH SUGAR RESPONSE8, MURUS 4,
UDP-D-XYLOSE 4-EPIMERASE 1		 -0.74 0.3 -0.31
101 AT3G05360 receptor like protein 30 receptor like protein 30, receptor
like protein 30		 -0.74 0.33 -0.31
102 AT1G17180 glutathione S-transferase TAU 25 glutathione S-transferase TAU 25,
glutathione S-transferase TAU 25		 -0.73 0.32 -0.31
103 AT5G51500 Plant invertase/pectin methylesterase inhibitor superfamily -0.73 0.33 -0.31
104 AT5G06860 polygalacturonase inhibiting protein 1 POLYGALACTURONASE INHIBITING
PROTEIN 1, polygalacturonase
inhibiting protein 1		 -0.73 0.33 -0.31
105 AT5G14180 Myzus persicae-induced lipase 1 Myzus persicae-induced lipase 1 -0.72 0.31 -0.31
106 AT3G27210 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
plasma membrane; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G40860.1); Has 133 Blast hits to 98 proteins in 25
species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 7;
Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source:
NCBI BLink).		 -0.72 0.31 -0.32
107 AT2G41850 polygalacturonase abscission zone A. thaliana ARABIDOPSIS DEHISCENCE ZONE
POLYGALACTURONASE 2,
polygalacturonase abscission zone
A. thaliana		 -0.72 0.31 -0.33
108 AT5G49880 mitotic checkpoint family protein -0.72 0.32 -0.34
109 AT3G55270 mitogen-activated protein kinase phosphatase 1 ARABIDOPSIS MITOGEN-ACTIVATED
PROTEIN KINASE PHOSPHATASE 1,
mitogen-activated protein kinase
phosphatase 1		 -0.72 0.32 -0.32
110 AT5G17850 Sodium/calcium exchanger family protein -0.72 0.31 -0.33
111 AT1G65690 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.72 0.32 -0.31
112 AT1G48370 YELLOW STRIPE like 8 YELLOW STRIPE like 8 -0.71 0.34 -0.3
113 AT1G77280 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 -0.71 0.31 -0.28
114 AT3G25250 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 AGC2, AGC2-1, AtOXI1, oxidative
signal-inducible1		 -0.71 0.33 -0.31
115 AT3G61850 Dof-type zinc finger DNA-binding family protein dof affecting germination 1 -0.7 0.32 -0.32
116 AT1G23230 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23
(InterPro:IPR021629); Has 187 Blast hits to 184 proteins in
67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi
- 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9
(source: NCBI BLink).		 -0.7 0.32 -0.33
117 AT5G65600 Concanavalin A-like lectin protein kinase family protein -0.7 0.31 -0.32
118 AT5G24600 Protein of unknown function, DUF599 -0.7 0.32 -0.33
119 AT4G12120 Sec1/munc18-like (SM) proteins superfamily ATSEC1B, SEC1B -0.7 0.33 -0.3