AT4G27470 : ATRMA3
Query Information
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AGICode AT4G27470
Description RING membrane-anchor 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G27470 RING membrane-anchor 3 ATRMA3, RING membrane-anchor 3 1 0.32 -0.31
2 AT4G17940 Tetratricopeptide repeat (TPR)-like superfamily protein 0.84 0.33 -0.29
3 AT1G54210 Ubiquitin-like superfamily protein AUTOPHAGY 12, ATATG12, AUTOPHAGY
12 A		 0.81 0.29 -0.33
4 AT5G05230 RING/U-box superfamily protein 0.8 0.3 -0.3
5 AT4G16120 COBRA-like protein-7 precursor ARABIDOPSIS THALIANA SEC61 BETA 1,
COBRA-like protein-7 precursor,
SEC61 BETA 1		 -0.8 0.34 -0.3
6 AT1G78890 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16840.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.8 0.29 -0.32
7 AT3G06170 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 0.79 0.32 -0.31
8 AT1G07230 non-specific phospholipase C1 non-specific phospholipase C1 0.78 0.32 -0.31
9 AT2G31800 Integrin-linked protein kinase family 0.78 0.31 -0.31
10 AT5G50820 NAC domain containing protein 97 NAC domain containing protein 97,
NAC domain containing protein 97		 -0.78 0.32 -0.33
11 AT2G41430 dehydration-induced protein (ERD15) CTC-Interacting Domain 1, EARLY
RESPONSIVE TO DEHYDRATION 15,
LIGHT STRESS-REGULATED 1		 0.77 0.3 -0.3
12 AT2G19350 Eukaryotic protein of unknown function (DUF872) 0.76 0.31 -0.31
13 AT2G34780 maternal effect embryo arrest 22 EMBRYO DEFECTIVE 1611, MATERNAL
EFFECT EMBRYO ARREST 22		 -0.76 0.31 -0.29
14 AT2G26430 arginine-rich cyclin 1 ARGININE-RICH CYCLIN 1,
arginine-rich cyclin 1		 0.76 0.31 -0.32
15 AT4G16780 homeobox protein 2 homeobox protein 2, ARABIDOPSIS
THALIANA HOMEOBOX PROTEIN 2, HAT4,
homeobox protein 2		 0.76 0.31 -0.31
16 AT1G15880 golgi snare 11 atgos11, golgi snare 11 0.76 0.3 -0.3
17 AT4G26160 atypical CYS HIS rich thioredoxin 1 atypical CYS HIS rich thioredoxin
1		 0.76 0.3 -0.32
18 AT1G16840 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits
to 71 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.76 0.31 -0.31
19 AT2G20740 Tetraspanin family protein 0.75 0.33 -0.32
20 AT1G27880 DEAD/DEAH box RNA helicase family protein -0.75 0.34 -0.31
21 AT1G56090 Tetratricopeptide repeat (TPR)-like superfamily protein 0.75 0.32 -0.3
22 AT1G29970 60S ribosomal protein L18A-1 60S ribosomal protein L18A-1 0.74 0.31 -0.32
23 AT1G76660 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT5G52430.1); Has 353 Blast hits to 231 proteins in
60 species: Archae - 0; Bacteria - 6; Metazoa - 57; Fungi -
22; Plants - 125; Viruses - 4; Other Eukaryotes - 139
(source: NCBI BLink).		 0.74 0.3 -0.3
24 AT3G06780 glycine-rich protein 0.74 0.31 -0.31
25 AT1G18070 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 -0.74 0.34 -0.33
26 AT5G27280 Zim17-type zinc finger protein 0.74 0.31 -0.32
27 AT4G39090 Papain family cysteine protease RESPONSIVE TO DEHYDRATION 19,
RESPONSIVE TO DEHYDRATION 19A		 0.73 0.32 -0.31
28 AT2G15890 maternal effect embryo arrest 14 maternal effect embryo arrest 14 0.73 0.31 -0.33
29 AT2G15695 Protein of unknown function DUF829, transmembrane 53 0.73 0.31 -0.32
30 AT2G20960 Arabidopsis phospholipase-like protein (PEARLI 4) family pEARLI4 0.73 0.31 -0.3
31 AT1G17690 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: nucleus; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Digestive organ
expansion factor, predicted (InterPro:IPR010678); Has 25006
Blast hits to 13379 proteins in 904 species: Archae - 102;
Bacteria - 5571; Metazoa - 7448; Fungi - 3168; Plants -
1056; Viruses - 466; Other Eukaryotes - 7195 (source: NCBI
BLink).		 nucleolar factor 1 -0.72 0.32 -0.34
32 AT3G53940 Mitochondrial substrate carrier family protein -0.72 0.32 -0.33
33 AT5G44080 Basic-leucine zipper (bZIP) transcription factor family
protein		 0.72 0.3 -0.32
34 AT3G47160 RING/U-box superfamily protein 0.72 0.31 -0.31
35 AT5G67100 DNA-directed DNA polymerases INCURVATA2 -0.72 0.33 -0.31
36 AT4G19860 alpha/beta-Hydrolases superfamily protein 0.72 0.32 -0.28
37 AT4G34740 GLN phosphoribosyl pyrophosphate amidotransferase 2 GLN phosphoribosyl pyrophosphate
amidotransferase 2, GLN
phosphoribosyl pyrophosphate
amidotransferase 2, ATPURF2,
CHLOROPLAST IMPORT APPARATUS 1		 -0.72 0.31 -0.32
38 AT2G15960 unknown protein; Has 14 Blast hits to 14 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.72 0.33 -0.32
39 AT2G28600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.72 0.32 -0.31
40 AT1G50920 Nucleolar GTP-binding protein -0.72 0.3 -0.32
41 AT4G30840 Transducin/WD40 repeat-like superfamily protein -0.72 0.31 -0.31
42 AT3G47460 Structural maintenance of chromosomes (SMC) family protein ATSMC2 -0.72 0.32 -0.31
43 AT5G38895 RING/U-box superfamily protein 0.72 0.32 -0.3
44 AT3G06700 Ribosomal L29e protein family -0.72 0.29 -0.32
45 AT3G45770 Polyketide synthase, enoylreductase family protein 0.71 0.31 -0.3
46 AT1G66900 alpha/beta-Hydrolases superfamily protein 0.71 0.32 -0.31
47 AT5G59850 Ribosomal protein S8 family protein -0.71 0.32 -0.33
48 AT2G37160 Transducin/WD40 repeat-like superfamily protein -0.71 0.32 -0.33
49 AT2G10010 transposable element gene -0.71 0.32 -0.32
50 AT1G03610 Protein of unknown function (DUF789) 0.71 0.32 -0.3
51 AT4G35480 RING-H2 finger A3B RING-H2 finger A3B 0.7 0.35 -0.33
52 AT3G13430 RING/U-box superfamily protein 0.7 0.35 -0.32
53 AT5G06000 eukaryotic translation initiation factor 3G2 ARABIDOPSIS THALIANA EUKARYOTIC
TRANSLATION INITIATION FACTOR 3G2,
eukaryotic translation initiation
factor 3G2		 -0.7 0.31 -0.32
54 AT3G52460 hydroxyproline-rich glycoprotein family protein -0.7 0.32 -0.3
55 AT5G19860 Protein of unknown function, DUF538 0.7 0.3 -0.33
56 AT1G60080 3'-5'-exoribonuclease family protein -0.7 0.31 -0.31
57 AT1G14610 valyl-tRNA synthetase / valine--tRNA ligase (VALRS) TWIN 2, VALYL TRNA SYNTHETASE -0.7 0.32 -0.32
58 AT5G67240 small RNA degrading nuclease 3 small RNA degrading nuclease 3 -0.7 0.31 -0.31
59 AT5G63920 topoisomerase 3alpha AtTOP3alpha, topoisomerase 3alpha -0.7 0.34 -0.29
60 AT3G16840 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.7 0.3 -0.32
61 AT4G05610 transposable element gene -0.7 0.3 -0.31
62 AT3G23940 dehydratase family -0.69 0.31 -0.34
63 AT1G63780 Ribosomal RNA processing Brix domain protein IMP4 -0.69 0.32 -0.32
64 AT1G77550 tubulin-tyrosine ligases;tubulin-tyrosine ligases -0.69 0.32 -0.29
65 AT2G41530 S-formylglutathione hydrolase ARABIDOPSIS THALIANA
S-FORMYLGLUTATHIONE HYDROLASE,
S-formylglutathione hydrolase		 0.69 0.31 -0.32
66 AT1G19230 Riboflavin synthase-like superfamily protein 0.69 0.29 -0.34
67 AT4G16520 Ubiquitin-like superfamily protein autophagy 8f 0.69 0.32 -0.29
68 AT2G31660 ARM repeat superfamily protein enhanced miRNA activity 1, SUPER
SENSITIVE TO ABA AND DROUGHT2,
UNARMED 9		 -0.69 0.32 -0.33
69 AT1G11280 S-locus lectin protein kinase family protein -0.69 0.3 -0.31
70 AT1G01550 Protein of unknown function (DUF793) BYPASS 1 0.69 0.3 -0.29
71 AT1G17790 DNA-binding bromodomain-containing protein 0.69 0.31 -0.3
72 AT3G15080 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.69 0.34 -0.32
73 AT1G63810 CONTAINS InterPro DOMAIN/s: Nrap protein
(InterPro:IPR005554); Has 396 Blast hits to 382 proteins in
182 species: Archae - 3; Bacteria - 2; Metazoa - 142; Fungi
- 146; Plants - 43; Viruses - 0; Other Eukaryotes - 60
(source: NCBI BLink).		 -0.68 0.31 -0.3
74 AT1G78450 SOUL heme-binding family protein -0.68 0.32 -0.31
75 AT2G21710 Mitochondrial transcription termination factor family
protein		 embryo defective 2219 -0.68 0.31 -0.31
76 AT4G13160 Protein of unknown function, DUF593 0.68 0.31 -0.32
77 AT5G23180 BEST Arabidopsis thaliana protein match is: DNA-binding
storekeeper protein-related transcriptional regulator
(TAIR:AT4G01260.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.68 0.29 -0.29
78 AT5G27910 nuclear factor Y, subunit C8 nuclear factor Y, subunit C8 -0.68 0.32 -0.32
79 AT5G40040 60S acidic ribosomal protein family -0.68 0.31 -0.31
80 AT3G24320 MUTL protein homolog 1 ATMSH1, CHLOROPLAST MUTATOR, CHM1,
MUTL protein homolog 1		 -0.68 0.31 -0.31
81 AT5G11490 adaptin family protein -0.68 0.32 -0.3
82 AT3G15070 RING/U-box superfamily protein 0.68 0.31 -0.32
83 AT4G20980 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)		 -0.68 0.31 -0.29
84 AT3G17970 translocon at the outer membrane of chloroplasts 64-III translocon at the outer membrane
of chloroplasts 64-III, translocon
at the outer membrane of
chloroplasts 64-III		 -0.68 0.31 -0.32
85 AT1G14200 RING/U-box superfamily protein 0.68 0.3 -0.32
86 AT4G30890 ubiquitin-specific protease 24 ubiquitin-specific protease 24 -0.68 0.29 -0.32
87 AT3G13230 RNA-binding KH domain-containing protein -0.68 0.31 -0.3
88 AT3G56870 unknown protein; Has 204 Blast hits to 201 proteins in 58
species: Archae - 0; Bacteria - 10; Metazoa - 72; Fungi -
8; Plants - 41; Viruses - 0; Other Eukaryotes - 73 (source:
NCBI BLink).		 -0.67 0.32 -0.32
89 AT2G19380 RNA recognition motif (RRM)-containing protein -0.67 0.32 -0.3
90 AT3G62360 Carbohydrate-binding-like fold -0.67 0.29 -0.34
91 AT2G26210 Ankyrin repeat family protein 0.67 0.33 -0.31
92 AT3G51320 Pentatricopeptide repeat (PPR) superfamily protein -0.67 0.32 -0.3
93 AT3G57940 Domain of unknown function (DUF1726) ;Putative ATPase
(DUF699)		 -0.67 0.32 -0.31
94 AT4G36150 Disease resistance protein (TIR-NBS-LRR class) family 0.67 0.32 -0.34
95 AT1G08110 lactoylglutathione lyase family protein / glyoxalase I
family protein		 0.67 0.33 -0.31
96 AT4G29420 F-box/RNI-like superfamily protein 0.67 0.32 -0.33
97 AT5G58370 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.67 0.32 -0.31
98 AT5G27620 cyclin H;1 cyclin H;1 -0.67 0.32 -0.31
99 AT1G55000 peptidoglycan-binding LysM domain-containing protein 0.67 0.32 -0.3
100 AT3G42690 transposable element gene -0.66 0.32 -0.31
101 AT1G43700 VIRE2-interacting protein 1 sulphate utilization efficiency 3,
VIRE2-interacting protein 1		 0.66 0.33 -0.3
102 AT5G06810 Mitochondrial transcription termination factor family
protein		 -0.66 0.31 -0.33
103 AT1G27290 unknown protein; Has 44 Blast hits to 44 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.66 0.33 -0.33
104 AT1G56070 Ribosomal protein S5/Elongation factor G/III/V family
protein		 LOW EXPRESSION OF OSMOTICALLY
RESPONSIVE GENES 1		 -0.66 0.31 -0.34
105 AT2G46550 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G01240.3); Has 72 Blast hits
to 68 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.66 0.31 -0.31
106 AT3G58510 DEA(D/H)-box RNA helicase family protein -0.66 0.33 -0.31
107 AT5G10960 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.66 0.31 -0.34
108 AT1G26800 RING/U-box superfamily protein 0.66 0.31 -0.33
109 AT3G01610 cell division cycle 48C cell division cycle 48C, embryo
defective 1354		 -0.65 0.33 -0.33
110 AT5G02290 Protein kinase superfamily protein NAK 0.65 0.32 -0.31
111 AT1G06630 F-box/RNI-like superfamily protein 0.65 0.33 -0.34
112 AT5G40360 myb domain protein 115 myb domain protein 115, myb domain
protein 115		 -0.65 0.33 -0.31
113 AT2G43650 Sas10/U3 ribonucleoprotein (Utp) family protein EMBRYO DEFECTIVE 2777 -0.65 0.32 -0.33
114 AT1G64280 regulatory protein (NPR1) ARABIDOPSIS NONEXPRESSER OF PR
GENES 1, NON-INDUCIBLE IMMUNITY 1,
NONEXPRESSER OF PR GENES 1,
SALICYLIC ACID INSENSITIVE 1		 0.65 0.31 -0.32
115 AT3G60590 unknown protein; LOCATED IN: chloroplast, chloroplast inner
membrane, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G48460.1); Has 81 Blast hits to 81 proteins in 19
species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0;
Plants - 70; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.65 0.31 -0.29
116 AT1G53510 mitogen-activated protein kinase 18 ARABIDOPSIS THALIANA MAP KINASE
18, mitogen-activated protein
kinase 18		 -0.65 0.32 -0.3
117 AT2G46260 BTB/POZ/Kelch-associated protein 0.65 0.32 -0.32
118 AT1G21010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G76600.1); Has 206 Blast hits to 206 proteins in
13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 206; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.65 0.3 -0.32
119 AT1G50740 Transmembrane proteins 14C 0.65 0.35 -0.3
120 AT3G02060 DEAD/DEAH box helicase, putative -0.65 0.31 -0.32
121 AT3G09030 BTB/POZ domain-containing protein 0.65 0.34 -0.32
122 AT5G52850 Pentatricopeptide repeat (PPR) superfamily protein -0.65 0.34 -0.28
123 AT3G07870 F-box and associated interaction domains-containing protein 0.65 0.31 -0.36
124 AT1G09660 RNA-binding KH domain-containing protein -0.64 0.31 -0.29
125 AT5G01730 SCAR family protein 4 ATSCAR4, SCAR family protein 4,
WAVE3		 -0.64 0.31 -0.3
126 AT3G48900 single-stranded DNA endonuclease family protein -0.64 0.33 -0.32
127 AT4G21150 ribophorin II (RPN2) family protein HAPLESS 6 -0.64 0.34 -0.31
128 AT2G34700 Pollen Ole e 1 allergen and extensin family protein -0.64 0.33 -0.32
129 AT1G06380 Ribosomal protein L1p/L10e family -0.64 0.33 -0.29
130 AT3G61590 Galactose oxidase/kelch repeat superfamily protein HS, HAWAIIAN SKIRT -0.64 0.3 -0.29
131 AT2G31740 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.64 0.3 -0.3
132 AT3G55150 exocyst subunit exo70 family protein H1 exocyst subunit exo70 family
protein H1, exocyst subunit exo70
family protein H1		 -0.64 0.31 -0.32
133 AT1G32450 nitrate transporter 1.5 nitrate transporter 1.5 -0.64 0.32 -0.35
134 AT3G52140 tetratricopeptide repeat (TPR)-containing protein -0.64 0.3 -0.32
135 AT1G20230 Pentatricopeptide repeat (PPR) superfamily protein -0.64 0.33 -0.32
136 AT2G25100 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.64 0.32 -0.32
137 AT5G51720 2 iron, 2 sulfur cluster binding -0.64 0.32 -0.3
138 AT1G33410 SUPPRESSOR OF AUXIN RESISTANCE1 ARABIDOPSIS NUCLEOPORIN 160,
NUCLEOPORIN 160, SUPPRESSOR OF
AUXIN RESISTANCE1		 -0.63 0.32 -0.31
139 AT4G22970 homolog of separase homolog of separase, homolog of
separase, SEPARASE, RADIALLY
SWOLLEN 4		 -0.63 0.31 -0.31
140 AT1G76120 Pseudouridine synthase family protein -0.63 0.3 -0.33
141 AT5G38720 unknown protein; Has 13419 Blast hits to 9093 proteins in
698 species: Archae - 38; Bacteria - 1038; Metazoa - 4949;
Fungi - 1086; Plants - 485; Viruses - 44; Other Eukaryotes
- 5779 (source: NCBI BLink).		 -0.63 0.33 -0.3
142 AT1G20410 Pseudouridine synthase family protein -0.63 0.31 -0.31
143 AT5G26180 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.63 0.29 -0.32
144 AT1G72560 ARM repeat superfamily protein PAUSED -0.63 0.3 -0.32
145 AT2G24640 ubiquitin-specific protease 19 ubiquitin-specific protease 19 -0.63 0.33 -0.3
146 AT5G39960 GTP binding;GTP binding -0.63 0.33 -0.32
147 AT1G69330 RING/U-box superfamily protein -0.63 0.3 -0.3
148 AT5G64720 Protein of unknown function (DUF1278) -0.63 0.3 -0.31
149 AT5G43610 sucrose-proton symporter 6 sucrose-proton symporter 6,
sucrose-proton symporter 6		 -0.63 0.31 -0.31
150 AT3G48480 Cysteine proteinases superfamily protein -0.63 0.34 -0.31
151 AT1G03170 Protein of unknown function (DUF3049) FANTASTIC FOUR 2 -0.63 0.31 -0.29
152 AT3G10690 DNA GYRASE A DNA GYRASE A -0.63 0.29 -0.32
153 AT1G04080 Tetratricopeptide repeat (TPR)-like superfamily protein PRP39 -0.63 0.34 -0.29
154 AT1G06470 Nucleotide/sugar transporter family protein -0.63 0.34 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
155 C0161 MST_1566.3 - - - 0.73 0.47 -0.45
156 C0163 MST_1589.2 - - - 0.67 0.47 -0.46