AT4G26850 : vitamin c defective 2
Query Information
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AGICode AT4G26850
Description mannose-1-phosphate guanylyltransferase (GDP)s;GDP-galactose:mannose-1-phosphate guanylyltransferases;GDP-galactose:glucose-1-phosphate guanylyltransferases;GDP-galactose:myoinositol-1-phosphate guanylyltransferases;glucose-1-phosphate guanylyltransferase
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G26850 mannose-1-phosphate guanylyltransferase
(GDP)s;GDP-galactose:mannose-1-phosphate
guanylyltransferases;GDP-galactose:glucose-1-phosphate
guanylyltransferases;GDP-galactose:myoinositol-1-phosphate
guanylyltransferases;glucose-1-phosphate
guanylyltransferase		 vitamin c defective 2 1 0.31 -0.33
2 AT1G71480 Nuclear transport factor 2 (NTF2) family protein 0.74 0.29 -0.3
3 AT5G24660 response to low sulfur 2 RESPONSE TO LOW SULFUR 2 0.73 0.3 -0.33
4 AT3G01180 starch synthase 2 starch synthase 2, starch synthase
2		 0.73 0.3 -0.32
5 AT5G59380 methyl-CPG-binding domain 6 ATMBD6, methyl-CPG-binding domain
6		 -0.72 0.31 -0.32
6 AT5G48850 Tetratricopeptide repeat (TPR)-like superfamily protein SULPHUR DEFICIENCY-INDUCED 1 0.72 0.33 -0.29
7 AT4G10770 oligopeptide transporter 7 ARABIDOPSIS THALIANA OLIGOPEPTIDE
TRANSPORTER 7, oligopeptide
transporter 7		 0.71 0.31 -0.31
8 AT4G34630 unknown protein; Has 30 Blast hits to 30 proteins in 10
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.7 0.32 -0.31
9 AT1G07010 Calcineurin-like metallo-phosphoesterase superfamily
protein		 AtSLP1, Shewenella-like protein
phosphatase 1		 0.69 0.31 -0.31
10 AT5G46160 Ribosomal protein L14p/L23e family protein -0.69 0.33 -0.32
11 AT3G46980 phosphate transporter 4;3 phosphate transporter 4;3 0.68 0.33 -0.3
12 AT2G21340 MATE efflux family protein 0.67 0.3 -0.33
13 AT1G05200 glutamate receptor 3.4 glutamate receptor 3.4, glutamate
receptor 3.4, GLUR3		 0.67 0.31 -0.32
14 AT5G24150 FAD/NAD(P)-binding oxidoreductase family protein SQUALENE MONOOXYGENASE 5, SQP1 0.67 0.31 -0.29
15 AT3G02830 zinc finger protein 1 zinc finger protein 1 0.67 0.32 -0.32
16 AT4G02420 Concanavalin A-like lectin protein kinase family protein 0.66 0.31 -0.34
17 AT3G16310 mitotic phosphoprotein N' end (MPPN) family protein -0.66 0.31 -0.29
18 AT4G39070 B-box zinc finger family protein -0.66 0.31 -0.32
19 AT3G10420 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 SEEDLING PLASTID DEVELOPMENT 1 0.66 0.33 -0.32
20 AT1G50440 RING/FYVE/PHD zinc finger superfamily protein 0.66 0.32 -0.3
21 AT4G02270 root hair specific 13 root hair specific 13 -0.66 0.31 -0.3
22 AT1G19700 BEL1-like homeodomain 10 BEL1-like homeodomain 10,
BEL1-LIKE HOMEODOMAIN 10		 0.65 0.32 -0.32
23 AT4G11800 Calcineurin-like metallo-phosphoesterase superfamily
protein		 0.65 0.31 -0.31
24 AT4G27850 Glycine-rich protein family 0.65 0.32 -0.31
25 AT3G60550 cyclin p3;2 cyclin p3;2 -0.65 0.32 -0.32
26 AT5G51050 Mitochondrial substrate carrier family protein ATP/phosphate carrier 2 0.64 0.31 -0.33
27 AT5G24655 response to low sulfur 4 RESPONSE TO LOW SULFUR 4 0.64 0.3 -0.31
28 AT3G55130 white-brown complex homolog 19 ATP-binding cassette G19,
white-brown complex homolog 19,
white-brown complex homolog 19		 0.64 0.32 -0.31
29 AT3G59300 Pentatricopeptide repeat (PPR) superfamily protein 0.64 0.31 -0.32
30 AT3G48100 response regulator 5 response regulator 5, ARABIDOPSIS
THALIANA RESPONSE REGULATOR 2,
INDUCED BY CYTOKININ 6, response
regulator 5		 -0.64 0.31 -0.32
31 AT1G10590 Nucleic acid-binding, OB-fold-like protein -0.63 0.29 -0.3
32 AT3G11670 UDP-Glycosyltransferase superfamily protein DIGALACTOSYL DIACYLGLYCEROL
DEFICIENT 1		 0.63 0.32 -0.3
33 AT1G69970 CLAVATA3/ESR-RELATED 26 CLAVATA3/ESR-RELATED 26 0.63 0.31 -0.33
34 AT4G11240 Calcineurin-like metallo-phosphoesterase superfamily
protein		 TOPP7 -0.63 0.29 -0.3
35 AT4G19430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.63 0.3 -0.29
36 AT2G47420 Ribosomal RNA adenine dimethylase family protein adenosine dimethyl transferase 1A -0.63 0.3 -0.3
37 AT3G58350 RESTRICTED TEV MOVEMENT 3 RESTRICTED TEV MOVEMENT 3 0.62 0.3 -0.3
38 AT5G05860 UDP-glucosyl transferase 76C2 UDP-glucosyl transferase 76C2 -0.62 0.32 -0.31
39 AT5G62920 response regulator 6 response regulator 6 -0.62 0.3 -0.31
40 AT5G58390 Peroxidase superfamily protein 0.61 0.31 -0.3
41 AT5G62810 peroxin 14 ATPEX14, PEROXISOME DEFECTIVE 2,
peroxin 14		 0.61 0.3 -0.3
42 AT3G49790 Carbohydrate-binding protein -0.61 0.32 -0.32
43 AT4G25820 xyloglucan endotransglucosylase/hydrolase 14 ATXTH14, xyloglucan
endotransglucosylase/hydrolase 14,
xyloglucan endotransglycosylase 9		 -0.61 0.31 -0.32
44 AT1G78130 Major facilitator superfamily protein unfertilized embryo sac 2 0.61 0.33 -0.3
45 AT3G57930 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G42190.1); Has 1519 Blast hits
to 1241 proteins in 182 species: Archae - 0; Bacteria - 60;
Metazoa - 576; Fungi - 133; Plants - 127; Viruses - 30;
Other Eukaryotes - 593 (source: NCBI BLink).		 -0.6 0.33 -0.31
46 AT4G24740 FUS3-complementing gene 2 FUS3-complementing gene 2, AME1,
FUS3-complementing gene 2		 0.6 0.31 -0.35
47 AT5G46470 disease resistance protein (TIR-NBS-LRR class) family RESISTANT TO P. SYRINGAE 6 0.6 0.3 -0.3
48 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 0.6 0.3 -0.33
49 AT5G38700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, LP.10 ten leaves
visible, petal differentiation and expansion stage, LP.08
eight leaves visible, LP.12 twelve leaves visible; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G02170.1); Has 64 Blast hits to 64 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.3 -0.32
50 AT2G46450 cyclic nucleotide-gated channel 12 cyclic nucleotide-gated channel
12, cyclic nucleotide-gated
channel 12		 0.6 0.33 -0.31
51 AT2G35050 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 0.6 0.31 -0.32
52 AT1G19630 cytochrome P450, family 722, subfamily A, polypeptide 1 cytochrome P450, family 722,
subfamily A, polypeptide 1		 0.6 0.31 -0.3
53 AT1G09575 Protein of unknown function (DUF607) -0.6 0.33 -0.31
54 AT2G40650 PRP38 family protein -0.6 0.32 -0.31
55 AT4G27350 Protein of unknown function (DUF1223) -0.6 0.34 -0.3
56 AT4G34140 D111/G-patch domain-containing protein 0.6 0.33 -0.31
57 AT1G30870 Peroxidase superfamily protein -0.6 0.33 -0.33
58 AT3G26760 NAD(P)-binding Rossmann-fold superfamily protein -0.59 0.31 -0.31
59 AT4G26010 Peroxidase superfamily protein -0.59 0.31 -0.33
60 AT2G17180 C2H2-like zinc finger protein DUO1-ACTIVATED ZINC FINGER 1 0.59 0.32 -0.33
61 AT3G15450 Aluminium induced protein with YGL and LRDR motifs -0.58 0.31 -0.31
62 AT1G01060 Homeodomain-like superfamily protein LATE ELONGATED HYPOCOTYL, LATE
ELONGATED HYPOCOTYL 1		 0.58 0.33 -0.31
63 AT5G12430 Heat shock protein DnaJ with tetratricopeptide repeat tetratricopeptide repeat 16 0.58 0.33 -0.33
64 AT5G06400 Pentatricopeptide repeat (PPR) superfamily protein -0.58 0.32 -0.3
65 AT3G25210 Tetratricopeptide repeat (TPR)-like superfamily protein -0.58 0.3 -0.29
66 AT5G18560 Integrase-type DNA-binding superfamily protein PUCHI -0.58 0.33 -0.34
67 AT5G05500 Pollen Ole e 1 allergen and extensin family protein MOP10 -0.57 0.32 -0.31
68 AT2G18010 SAUR-like auxin-responsive protein family -0.57 0.32 -0.33
69 AT2G41810 Protein of unknown function, DUF642 -0.57 0.3 -0.31
70 AT5G47680 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA
(guanine-N1-)-methyltransferase (InterPro:IPR016009), tRNA
(guanine-N(1)-)-methyltransferase, metazoa
(InterPro:IPR016653), tRNA (guanine-N1-)-methyltransferase,
eukaryotic (InterPro:IPR007356); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 AtTRM, tRNA modification 10 -0.57 0.32 -0.34
71 AT5G35190 proline-rich extensin-like family protein extensin 13 -0.57 0.34 -0.32
72 AT5G57530 xyloglucan endotransglucosylase/hydrolase 12 AtXTH12, xyloglucan
endotransglucosylase/hydrolase 12		 -0.57 0.3 -0.32
73 AT3G18030 HAL3-like protein A ATHAL3, ARABIDOPSIS THALIANA
HAL3-LIKE PROTEIN A, HALOTOLERANCE
DETERMINANT 3, HAL3-like protein A		 -0.57 0.31 -0.3
74 AT3G23030 indole-3-acetic acid inducible 2 indole-3-acetic acid inducible 2 -0.57 0.32 -0.32
75 AT4G33770 Inositol 1,3,4-trisphosphate 5/6-kinase family protein 0.57 0.31 -0.31
76 AT2G24220 purine permease 5 purine permease 5, purine permease
5		 0.57 0.31 -0.3
77 AT1G08190 vacuolar protein sorting 41 ATVAM2, VACUOLAR PROTEIN SORTING
41, VAM2, vacuolar protein sorting
41, ZIGZAG SUPPRESSOR 2		 0.57 0.3 -0.33
78 AT4G32660 Protein kinase superfamily protein AME3 0.57 0.33 -0.32
79 AT4G10120 Sucrose-phosphate synthase family protein ATSPS4F 0.56 0.31 -0.32
80 AT1G15580 indole-3-acetic acid inducible 5 ATAUX2-27, AUXIN-INDUCIBLE 2-27,
indole-3-acetic acid inducible 5		 -0.56 0.31 -0.3
81 AT2G26770 plectin-related stomatal closure-related actin
binding protein 1		 0.56 0.32 -0.32
82 AT1G02660 alpha/beta-Hydrolases superfamily protein -0.56 0.32 -0.31
83 AT5G67400 root hair specific 19 root hair specific 19 -0.56 0.28 -0.31
84 AT3G12350 F-box family protein 0.56 0.32 -0.34
85 AT5G46710 PLATZ transcription factor family protein -0.56 0.31 -0.32
86 AT5G11070 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.56 0.32 -0.3
87 AT1G60490 vacuolar protein sorting 34 ATVPS34, PHOSPATIDYLINOSITOL
3-KINASE, vacuolar protein sorting
34		 0.55 0.34 -0.31
88 AT1G29820 Magnesium transporter CorA-like family protein -0.55 0.31 -0.32
89 AT1G05690 BTB and TAZ domain protein 3 BTB and TAZ domain protein 3 0.55 0.31 -0.31
90 AT1G18290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
chloroplast; EXPRESSED IN: root; Has 94 Blast hits to 94
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.55 0.32 -0.29
91 AT5G04960 Plant invertase/pectin methylesterase inhibitor superfamily -0.55 0.32 -0.32
92 AT3G55720 Protein of unknown function (DUF620) -0.55 0.3 -0.32
93 AT1G72220 RING/U-box superfamily protein -0.55 0.32 -0.32
94 AT4G25760 glutamine dumper 2 glutamine dumper 2, glutamine
dumper 2		 0.55 0.32 -0.31
95 AT4G08480 mitogen-activated protein kinase kinase kinase 9 mitogen-activated protein kinase
kinase kinase 9, MAPK/ERK KINASE
KINASE 2		 0.55 0.3 -0.33
96 AT5G02800 Protein kinase superfamily protein CDG1-like 1 0.55 0.33 -0.3
97 AT1G54970 proline-rich protein 1 proline-rich protein 1,
proline-rich protein 1, ROOT HAIR
SPECIFIC 7		 -0.55 0.29 -0.29
98 AT5G67190 DREB and EAR motif protein 2 DREB and EAR motif protein 2 -0.54 0.35 -0.35
99 AT4G18260 Cytochrome b561/ferric reductase transmembrane protein
family		 -0.54 0.35 -0.32
100 AT4G19680 iron regulated transporter 2 IRON REGULATED TRANSPORTER 2, iron
regulated transporter 2		 -0.54 0.31 -0.28
101 AT1G30880 unknown protein; Has 24 Blast hits to 24 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.54 0.33 -0.3
102 AT3G60530 GATA transcription factor 4 GATA transcription factor 4 -0.54 0.32 -0.32
103 AT3G19120 PIF / Ping-Pong family of plant transposases -0.53 0.33 -0.32
104 AT5G25830 GATA transcription factor 12 GATA transcription factor 12 -0.53 0.3 -0.32
105 AT1G72950 Disease resistance protein (TIR-NBS class) -0.53 0.33 -0.31
106 AT3G56510 RNA-binding (RRM/RBD/RNP motifs) family protein -0.53 0.32 -0.3
107 AT5G04770 cationic amino acid transporter 6 ARABIDOPSIS THALIANA CATIONIC
AMINO ACID TRANSPORTER 6, cationic
amino acid transporter 6		 -0.53 0.3 -0.33
108 AT1G75190 unknown protein; Has 7306 Blast hits to 3858 proteins in
279 species: Archae - 15; Bacteria - 134; Metazoa - 3314;
Fungi - 546; Plants - 228; Viruses - 207; Other Eukaryotes
- 2862 (source: NCBI BLink).		 -0.53 0.31 -0.29
109 AT5G40540 Protein kinase superfamily protein -0.53 0.3 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
110 C0121 Isoheptylglucosinolate - - - -0.73 0.43 -0.47
111 C0096 Gluconic acid - D-Gluconate - 0.66 0.45 -0.44 C0096
112 C0210 Phytol E-Phytol Phytol chlorophyll a degradation II,
chlorophyll a degradation,
phytol salvage pathway 		0.66 0.45 -0.45 C0210