AGICode | AT4G26160 |
Description | atypical CYS HIS rich thioredoxin 1 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G26160 | atypical CYS HIS rich thioredoxin 1 | atypical CYS HIS rich thioredoxin 1 |
1 | 0.31 | -0.31 | ||
2 | AT1G66900 | alpha/beta-Hydrolases superfamily protein | 0.82 | 0.31 | -0.32 | |||
3 | AT3G06170 | Serinc-domain containing serine and sphingolipid biosynthesis protein |
0.79 | 0.31 | -0.32 | |||
4 | AT2G28600 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.78 | 0.31 | -0.33 | |||
5 | AT3G06780 | glycine-rich protein | 0.77 | 0.31 | -0.31 | |||
6 | AT4G16120 | COBRA-like protein-7 precursor | ARABIDOPSIS THALIANA SEC61 BETA 1, COBRA-like protein-7 precursor, SEC61 BETA 1 |
-0.77 | 0.32 | -0.31 | ||
7 | AT3G57150 | homologue of NAP57 | AtCBF5, AtNAP57, CBF5, homologue of NAP57 |
-0.76 | 0.34 | -0.33 | ||
8 | AT4G27470 | RING membrane-anchor 3 | ATRMA3, RING membrane-anchor 3 | 0.76 | 0.31 | -0.32 | ||
9 | AT5G67240 | small RNA degrading nuclease 3 | small RNA degrading nuclease 3 | -0.76 | 0.32 | -0.3 | ||
10 | AT4G11570 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
0.75 | 0.32 | -0.3 | |||
11 | AT3G16780 | Ribosomal protein L19e family protein | -0.75 | 0.31 | -0.32 | |||
12 | AT3G01610 | cell division cycle 48C | cell division cycle 48C, embryo defective 1354 |
-0.74 | 0.32 | -0.33 | ||
13 | AT5G05230 | RING/U-box superfamily protein | 0.74 | 0.29 | -0.31 | |||
14 | AT1G73740 | UDP-Glycosyltransferase superfamily protein | 0.74 | 0.32 | -0.3 | |||
15 | AT2G34780 | maternal effect embryo arrest 22 | EMBRYO DEFECTIVE 1611, MATERNAL EFFECT EMBRYO ARREST 22 |
-0.73 | 0.31 | -0.3 | ||
16 | AT1G07230 | non-specific phospholipase C1 | non-specific phospholipase C1 | 0.73 | 0.31 | -0.29 | ||
17 | AT5G27840 | Calcineurin-like metallo-phosphoesterase superfamily protein |
TOPP8 | 0.73 | 0.29 | -0.31 | ||
18 | AT3G27640 | Transducin/WD40 repeat-like superfamily protein | -0.73 | 0.35 | -0.33 | |||
19 | AT1G54210 | Ubiquitin-like superfamily protein | AUTOPHAGY 12, ATATG12, AUTOPHAGY 12 A |
0.72 | 0.32 | -0.32 | ||
20 | AT3G44750 | histone deacetylase 3 | ATHD2A, HISTONE DEACETYLASE 2A, histone deacetylase 3, HDT1 |
-0.72 | 0.31 | -0.32 | ||
21 | AT3G10210 | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein |
0.72 | 0.33 | -0.29 | |||
22 | AT4G30390 | unknown protein; Has 22 Blast hits to 22 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.72 | 0.32 | -0.31 | |||
23 | AT5G20900 | jasmonate-zim-domain protein 12 | jasmonate-zim-domain protein 12, TIFY3B |
0.72 | 0.3 | -0.32 | ||
24 | AT5G17930 | MIF4G domain-containing protein / MA3 domain-containing protein |
-0.72 | 0.31 | -0.31 | |||
25 | AT3G52140 | tetratricopeptide repeat (TPR)-containing protein | -0.72 | 0.31 | -0.31 | |||
26 | AT3G18600 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.71 | 0.33 | -0.29 | |||
27 | AT4G34740 | GLN phosphoribosyl pyrophosphate amidotransferase 2 | GLN phosphoribosyl pyrophosphate amidotransferase 2, GLN phosphoribosyl pyrophosphate amidotransferase 2, ATPURF2, CHLOROPLAST IMPORT APPARATUS 1 |
-0.71 | 0.33 | -0.32 | ||
28 | AT1G08110 | lactoylglutathione lyase family protein / glyoxalase I family protein |
0.71 | 0.31 | -0.31 | |||
29 | AT1G50920 | Nucleolar GTP-binding protein | -0.71 | 0.32 | -0.31 | |||
30 | AT1G64880 | Ribosomal protein S5 family protein | -0.71 | 0.3 | -0.31 | |||
31 | AT2G20740 | Tetraspanin family protein | 0.71 | 0.34 | -0.32 | |||
32 | AT3G13230 | RNA-binding KH domain-containing protein | -0.71 | 0.34 | -0.3 | |||
33 | AT1G44770 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49710.3); Has 81 Blast hits to 81 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.7 | 0.31 | -0.31 | |||
34 | AT1G80750 | Ribosomal protein L30/L7 family protein | -0.7 | 0.31 | -0.33 | |||
35 | AT4G05410 | Transducin/WD40 repeat-like superfamily protein | YAOZHE | -0.7 | 0.3 | -0.29 | ||
36 | AT3G62360 | Carbohydrate-binding-like fold | -0.69 | 0.33 | -0.32 | |||
37 | AT1G56110 | homolog of nucleolar protein NOP56 | homolog of nucleolar protein NOP56 | -0.69 | 0.31 | -0.31 | ||
38 | AT4G20770 | Pentatricopeptide repeat (PPR) superfamily protein | -0.69 | 0.31 | -0.32 | |||
39 | AT4G20440 | small nuclear ribonucleoprotein associated protein B | small nuclear ribonucleoprotein associated protein B |
-0.69 | 0.32 | -0.31 | ||
40 | AT3G24080 | KRR1 family protein | -0.69 | 0.3 | -0.32 | |||
41 | AT1G06380 | Ribosomal protein L1p/L10e family | -0.69 | 0.32 | -0.33 | |||
42 | AT1G14610 | valyl-tRNA synthetase / valine--tRNA ligase (VALRS) | TWIN 2, VALYL TRNA SYNTHETASE | -0.69 | 0.31 | -0.3 | ||
43 | AT3G01910 | sulfite oxidase | AT-SO, AtSO, sulfite oxidase | 0.69 | 0.32 | -0.33 | ||
44 | AT3G54650 | RNI-like superfamily protein | FBL17 | -0.69 | 0.33 | -0.31 | ||
45 | AT3G16840 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.69 | 0.32 | -0.34 | |||
46 | AT2G19350 | Eukaryotic protein of unknown function (DUF872) | 0.68 | 0.32 | -0.31 | |||
47 | AT5G19320 | RAN GTPase activating protein 2 | RAN GTPase activating protein 2 | -0.68 | 0.35 | -0.29 | ||
48 | AT3G56990 | embryo sac development arrest 7 | embryo sac development arrest 7 | -0.68 | 0.31 | -0.31 | ||
49 | AT1G48920 | nucleolin like 1 | nucleolin like 1, nucleolin like 1, PARALLEL 1 |
-0.68 | 0.32 | -0.33 | ||
50 | AT3G02760 | Class II aaRS and biotin synthetases superfamily protein | -0.68 | 0.32 | -0.32 | |||
51 | AT3G01160 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUC153 (InterPro:IPR012580); Has 36638 Blast hits to 21323 proteins in 1057 species: Archae - 109; Bacteria - 2369; Metazoa - 13796; Fungi - 4858; Plants - 1657; Viruses - 489; Other Eukaryotes - 13360 (source: NCBI BLink). |
-0.68 | 0.33 | -0.29 | |||
52 | AT1G15510 | Tetratricopeptide repeat (TPR)-like superfamily protein | ARABIDOPSIS EARLY CHLOROPLAST BIOGENESIS2, EARLY CHLOROPLAST BIOGENESIS2, VANILLA CREAM 1 |
-0.67 | 0.31 | -0.34 | ||
53 | AT5G19140 | Aluminium induced protein with YGL and LRDR motifs | AILP1, ATAILP1 | 0.67 | 0.29 | -0.31 | ||
54 | AT5G67100 | DNA-directed DNA polymerases | INCURVATA2 | -0.67 | 0.3 | -0.31 | ||
55 | AT3G62310 | RNA helicase family protein | -0.67 | 0.36 | -0.3 | |||
56 | AT3G17800 | Protein of unknown function (DUF760) | 0.67 | 0.34 | -0.32 | |||
57 | AT1G31850 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.67 | 0.31 | -0.32 | |||
58 | AT3G58510 | DEA(D/H)-box RNA helicase family protein | -0.67 | 0.32 | -0.32 | |||
59 | AT3G22660 | rRNA processing protein-related | -0.67 | 0.31 | -0.31 | |||
60 | AT3G15780 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52550.1); Has 20 Blast hits to 20 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.67 | 0.32 | -0.34 | |||
61 | AT3G07050 | GTP-binding family protein | nucleostemin-like 1 | -0.67 | 0.31 | -0.31 | ||
62 | AT5G10960 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
0.67 | 0.3 | -0.32 | |||
63 | AT1G01550 | Protein of unknown function (DUF793) | BYPASS 1 | 0.67 | 0.31 | -0.31 | ||
64 | AT3G12270 | protein arginine methyltransferase 3 | ARABIDOPSIS THALIANA PROTEIN ARGININE METHYLTRANSFERASE 3, protein arginine methyltransferase 3 |
-0.66 | 0.31 | -0.32 | ||
65 | AT1G62040 | Ubiquitin-like superfamily protein | autophagy 8c | 0.66 | 0.31 | -0.34 | ||
66 | AT1G50740 | Transmembrane proteins 14C | 0.66 | 0.31 | -0.31 | |||
67 | AT2G34470 | urease accessory protein G | PSKF109, urease accessory protein G |
0.66 | 0.3 | -0.32 | ||
68 | AT4G26600 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.66 | 0.3 | -0.3 | |||
69 | AT3G23610 | dual specificity protein phosphatase 1 | dual specificity protein phosphatase 1 |
0.66 | 0.32 | -0.32 | ||
70 | AT2G02760 | ubiquiting-conjugating enzyme 2 | ubiquiting-conjugating enzyme 2, ubiquitin-conjugating enzyme 2, ubiquiting-conjugating enzyme 2 |
0.66 | 0.31 | -0.32 | ||
71 | AT2G05120 | Nucleoporin, Nup133/Nup155-like | -0.66 | 0.33 | -0.32 | |||
72 | AT1G72440 | CCAAT-binding factor | embryo sac development arrest 25, SLOW WALKER2 |
-0.66 | 0.32 | -0.33 | ||
73 | AT3G15080 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
-0.66 | 0.33 | -0.35 | |||
74 | AT2G21090 | Pentatricopeptide repeat (PPR-like) superfamily protein | -0.65 | 0.3 | -0.3 | |||
75 | AT1G17690 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Digestive organ expansion factor, predicted (InterPro:IPR010678); Has 25006 Blast hits to 13379 proteins in 904 species: Archae - 102; Bacteria - 5571; Metazoa - 7448; Fungi - 3168; Plants - 1056; Viruses - 466; Other Eukaryotes - 7195 (source: NCBI BLink). |
nucleolar factor 1 | -0.65 | 0.31 | -0.3 | ||
76 | AT3G08840 | D-alanine--D-alanine ligase family | 0.65 | 0.32 | -0.32 | |||
77 | AT2G24050 | MIF4G domain-containing protein / MA3 domain-containing protein |
eukaryotic translation Initiation Factor isoform 4G2 |
-0.65 | 0.3 | -0.32 | ||
78 | AT4G38710 | glycine-rich protein | -0.65 | 0.32 | -0.33 | |||
79 | AT1G63940 | monodehydroascorbate reductase 6 | monodehydroascorbate reductase 6 | -0.65 | 0.31 | -0.3 | ||
80 | AT1G43700 | VIRE2-interacting protein 1 | sulphate utilization efficiency 3, VIRE2-interacting protein 1 |
0.65 | 0.31 | -0.3 | ||
81 | AT1G04770 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.65 | 0.3 | -0.33 | |||
82 | AT3G57940 | Domain of unknown function (DUF1726) ;Putative ATPase (DUF699) |
-0.65 | 0.29 | -0.32 | |||
83 | AT1G79150 | binding | -0.65 | 0.31 | -0.33 | |||
84 | AT3G16620 | translocon outer complex protein 120 | ARABIDOPSIS THALIANA TRANSLOCON OUTER COMPLEX PROTEIN 120, translocon outer complex protein 120 |
-0.65 | 0.3 | -0.31 | ||
85 | AT3G51500 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 23 Blast hits to 23 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.65 | 0.33 | -0.32 | |||
86 | AT1G78890 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.65 | 0.3 | -0.31 | |||
87 | AT4G17940 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.65 | 0.31 | -0.31 | |||
88 | AT1G56090 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.65 | 0.29 | -0.3 | |||
89 | AT1G16280 | RNA helicase 36 | Arabidopsis thaliana RNA helicase 36, RNA helicase 36, SLOW WALKER 3 |
-0.65 | 0.31 | -0.33 | ||
90 | AT2G37510 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.64 | 0.32 | -0.32 | |||
91 | AT2G43650 | Sas10/U3 ribonucleoprotein (Utp) family protein | EMBRYO DEFECTIVE 2777 | -0.64 | 0.32 | -0.32 | ||
92 | AT5G06810 | Mitochondrial transcription termination factor family protein |
-0.64 | 0.3 | -0.33 | |||
93 | AT3G14400 | ubiquitin-specific protease 25 | ubiquitin-specific protease 25 | -0.64 | 0.3 | -0.32 | ||
94 | AT1G76400 | Ribophorin I | -0.64 | 0.3 | -0.3 | |||
95 | AT5G11490 | adaptin family protein | -0.64 | 0.32 | -0.33 | |||
96 | AT4G29510 | arginine methyltransferase 11 | ARABIDOPSIS THALIANA ARGININE METHYLTRANSFERASE 11, ARABIDOPSIS THALIANA PROTEIN ARGININE METHYLTRANSFERASE 1B, arginine methyltransferase 11, PROTEIN ARGININE METHYLTRANSFERASE 1B |
-0.64 | 0.32 | -0.33 | ||
97 | AT3G62940 | Cysteine proteinases superfamily protein | -0.64 | 0.31 | -0.29 | |||
98 | AT3G61350 | SKP1 interacting partner 4 | SKP1 interacting partner 4 | 0.64 | 0.32 | -0.32 | ||
99 | AT1G06670 | nuclear DEIH-boxhelicase | nuclear DEIH-boxhelicase | -0.64 | 0.3 | -0.32 | ||
100 | AT1G09660 | RNA-binding KH domain-containing protein | -0.63 | 0.32 | -0.31 | |||
101 | AT5G01730 | SCAR family protein 4 | ATSCAR4, SCAR family protein 4, WAVE3 |
-0.63 | 0.33 | -0.3 | ||
102 | AT1G03830 | guanylate-binding family protein | -0.63 | 0.3 | -0.29 | |||
103 | AT1G15870 | Mitochondrial glycoprotein family protein | -0.63 | 0.29 | -0.33 | |||
104 | AT5G40040 | 60S acidic ribosomal protein family | -0.63 | 0.32 | -0.31 | |||
105 | AT1G18070 | Translation elongation factor EF1A/initiation factor IF2gamma family protein |
-0.63 | 0.34 | -0.31 | |||
106 | AT1G72320 | pumilio 23 | pumilio 23, pumilio 23 | -0.63 | 0.31 | -0.31 | ||
107 | AT1G14020 | O-fucosyltransferase family protein | -0.63 | 0.31 | -0.33 | |||
108 | AT4G22130 | STRUBBELIG-receptor family 8 | STRUBBELIG-receptor family 8 | -0.63 | 0.32 | -0.3 | ||
109 | AT4G27010 | CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
EMBRYO DEFECTIVE 2788 | -0.63 | 0.32 | -0.29 | ||
110 | AT4G02400 | U3 ribonucleoprotein (Utp) family protein | -0.63 | 0.31 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
111 | C0252 | Threonic acid | D,L-Threonic acid | L-Threonate | ascorbic acid degradation | 0.67 | 0.49 | -0.43 |