AT4G26230 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G26230
Description Ribosomal protein L31e family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G26230 Ribosomal protein L31e family protein 1 0.32 -0.31
2 AT1G29250 Alba DNA/RNA-binding protein 0.9 0.31 -0.33
3 AT3G23390 Zinc-binding ribosomal protein family protein 0.9 0.32 -0.32
4 AT3G05590 ribosomal protein L18 ribosomal protein L18 0.89 0.32 -0.32
5 AT2G19730 Ribosomal L28e protein family 0.89 0.31 -0.31
6 AT5G61170 Ribosomal protein S19e family protein 0.89 0.31 -0.32
7 AT4G36210 Protein of unknown function (DUF726) -0.89 0.33 -0.33
8 AT2G27840 histone deacetylase-related / HD-related HISTONE DEACETYLASE 13, HDT04,
HDT4		 0.88 0.32 -0.35
9 AT3G47370 Ribosomal protein S10p/S20e family protein 0.88 0.31 -0.34
10 AT3G56340 Ribosomal protein S26e family protein 0.88 0.29 -0.32
11 AT2G45730 eukaryotic initiation factor 3 gamma subunit family protein 0.88 0.31 -0.3
12 AT4G25740 RNA binding Plectin/S10 domain-containing protein 0.88 0.31 -0.31
13 AT3G06610 DNA-binding enhancer protein-related 0.87 0.29 -0.31
14 AT1G27400 Ribosomal protein L22p/L17e family protein 0.87 0.32 -0.3
15 AT2G32060 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.87 0.31 -0.31
16 AT1G34030 Ribosomal protein S13/S18 family 0.87 0.29 -0.33
17 AT2G36170 Ubiquitin supergroup;Ribosomal protein L40e 0.87 0.3 -0.34
18 AT3G62120 Class II aaRS and biotin synthetases superfamily protein 0.87 0.32 -0.35
19 AT1G07070 Ribosomal protein L35Ae family protein 0.87 0.33 -0.31
20 AT3G07110 Ribosomal protein L13 family protein 0.87 0.31 -0.31
21 AT5G27850 Ribosomal protein L18e/L15 superfamily protein 0.86 0.31 -0.32
22 AT4G16720 Ribosomal protein L23/L15e family protein 0.86 0.33 -0.31
23 AT1G48830 Ribosomal protein S7e family protein 0.86 0.32 -0.29
24 AT4G25890 60S acidic ribosomal protein family 0.86 0.31 -0.33
25 AT3G59540 Ribosomal L38e protein family 0.86 0.32 -0.33
26 AT5G67510 Translation protein SH3-like family protein 0.86 0.31 -0.3
27 AT2G45180 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.86 0.31 -0.34
28 AT3G18130 receptor for activated C kinase 1C receptor for activated C kinase
1C, receptor for activated C
kinase 1C		 0.86 0.32 -0.32
29 AT1G26910 Ribosomal protein L16p/L10e family protein ribosomal protein L10 B 0.86 0.31 -0.32
30 AT3G06700 Ribosomal L29e protein family 0.86 0.34 -0.3
31 AT5G47700 60S acidic ribosomal protein family 0.85 0.31 -0.33
32 AT1G04480 Ribosomal protein L14p/L23e family protein 0.85 0.31 -0.31
33 AT2G33370 Ribosomal protein L14p/L23e family protein 0.85 0.32 -0.34
34 AT1G73230 Nascent polypeptide-associated complex NAC 0.85 0.31 -0.33
35 AT5G27770 Ribosomal L22e protein family 0.85 0.33 -0.31
36 AT3G60770 Ribosomal protein S13/S15 0.85 0.33 -0.31
37 AT5G10360 Ribosomal protein S6e embryo defective 3010, Ribosomal
protein small subunit 6b		 0.85 0.3 -0.3
38 AT4G33865 Ribosomal protein S14p/S29e family protein 0.85 0.31 -0.3
39 AT4G28490 Leucine-rich receptor-like protein kinase family protein HAESA, RECEPTOR-LIKE PROTEIN
KINASE 5		 -0.85 0.31 -0.31
40 AT2G39460 ribosomal protein L23AA ARABIDOPSIS THALIANA RIBOSOMAL
PROTEIN L23A, RIBOSOMAL PROTEIN
L23A, RIBOSOMAL PROTEIN L23A1,
ribosomal protein L23AA		 0.85 0.3 -0.35
41 AT5G09510 Ribosomal protein S19 family protein 0.84 0.31 -0.32
42 AT1G15930 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.84 0.31 -0.32
43 AT4G15000 Ribosomal L27e protein family 0.84 0.33 -0.32
44 AT3G62870 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.84 0.31 -0.33
45 AT3G11510 Ribosomal protein S11 family protein 0.84 0.31 -0.32
46 AT1G31860 histidine biosynthesis bifunctional protein (HISIE) AT-IE, HISTIDINE BIOSYNTHESIS 2 0.84 0.31 -0.33
47 AT3G58700 Ribosomal L5P family protein 0.84 0.3 -0.33
48 AT2G39390 Ribosomal L29 family protein 0.84 0.29 -0.31
49 AT1G74270 Ribosomal protein L35Ae family protein 0.84 0.32 -0.31
50 AT2G19750 Ribosomal protein S30 family protein 0.83 0.34 -0.3
51 AT2G27710 60S acidic ribosomal protein family 0.83 0.29 -0.3
52 AT4G14320 Zinc-binding ribosomal protein family protein 0.83 0.3 -0.31
53 AT2G27720 60S acidic ribosomal protein family 0.83 0.31 -0.31
54 AT3G48930 Nucleic acid-binding, OB-fold-like protein embryo defective 1080 0.83 0.33 -0.34
55 AT1G17560 Ribosomal protein L14p/L23e family protein HUELLENLOS 0.83 0.34 -0.31
56 AT4G27380 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.83 0.32 -0.34
57 AT3G28900 Ribosomal protein L34e superfamily protein 0.83 0.31 -0.32
58 AT1G60080 3'-5'-exoribonuclease family protein 0.83 0.32 -0.32
59 AT3G09200 Ribosomal protein L10 family protein 0.83 0.32 -0.32
60 AT3G16080 Zinc-binding ribosomal protein family protein 0.83 0.32 -0.31
61 AT1G02780 Ribosomal protein L19e family protein embryo defective 2386 0.82 0.31 -0.35
62 AT5G64816 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.82 0.3 -0.3
63 AT5G59220 highly ABA-induced PP2C gene 1 highly ABA-induced PP2C gene 1,
senescence associated gene 113		 -0.82 0.31 -0.3
64 AT2G45710 Zinc-binding ribosomal protein family protein 0.82 0.33 -0.32
65 AT4G34555 Ribosomal protein S25 family protein 0.82 0.32 -0.33
66 AT2G43460 Ribosomal L38e protein family 0.82 0.32 -0.31
67 AT1G17880 basic transcription factor 3 ATBTF3, basic transcription factor
3		 0.82 0.31 -0.32
68 AT3G44590 60S acidic ribosomal protein family 0.82 0.3 -0.33
69 AT1G01100 60S acidic ribosomal protein family 0.82 0.32 -0.33
70 AT3G09500 Ribosomal L29 family protein 0.82 0.31 -0.31
71 AT3G22230 Ribosomal L27e protein family 0.82 0.31 -0.32
72 AT1G04340 HR-like lesion-inducing protein-related 0.81 0.3 -0.3
73 AT1G04270 cytosolic ribosomal protein S15 cytosolic ribosomal protein S15 0.81 0.32 -0.31
74 AT5G05470 eukaryotic translation initiation factor 2 alpha subunit ATEIF2-A2, eukaryotic translation
initiation factor 2 alpha subunit,
EIF2-A2		 0.81 0.31 -0.32
75 AT3G61620 3'-5'-exoribonuclease family protein RRP41 0.81 0.32 -0.32
76 AT3G04400 Ribosomal protein L14p/L23e family protein embryo defective 2171 0.81 0.32 -0.33
77 AT5G60990 DEA(D/H)-box RNA helicase family protein 0.81 0.3 -0.34
78 AT3G53740 Ribosomal protein L36e family protein 0.81 0.33 -0.32
79 AT5G41520 RNA binding Plectin/S10 domain-containing protein 0.81 0.32 -0.31
80 AT4G38100 unknown protein; LOCATED IN: chloroplast thylakoid
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G01150.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.81 0.3 -0.31
81 AT5G28520 Mannose-binding lectin superfamily protein -0.81 0.32 -0.32
82 AT2G37870 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.81 0.3 -0.29
83 AT1G77940 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.81 0.32 -0.31
84 AT2G37190 Ribosomal protein L11 family protein 0.81 0.31 -0.31
85 AT3G49100 Signal recognition particle, SRP9/SRP14 subunit 0.8 0.31 -0.3
86 AT1G26340 cytochrome B5 isoform A ARABIDOPSIS CYTOCHROME B5 ISOFORM
A, B5 #6, cytochrome B5 isoform A		 0.8 0.34 -0.29
87 AT1G69620 ribosomal protein L34 ribosomal protein L34 0.8 0.3 -0.31
88 AT2G33380 Caleosin-related family protein Arabidopsis thaliana caleosin 3,
caleosin 3, caleosin 3, RESPONSIVE
TO DESSICATION 20		 -0.8 0.32 -0.3
89 AT5G59850 Ribosomal protein S8 family protein 0.8 0.31 -0.32
90 AT2G01640 unknown protein; Has 51 Blast hits to 51 proteins in 21
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2;
Plants - 41; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 0.8 0.32 -0.3
91 AT5G02870 Ribosomal protein L4/L1 family 0.8 0.31 -0.33
92 AT4G03030 Galactose oxidase/kelch repeat superfamily protein -0.8 0.29 -0.31
93 AT5G23290 prefoldin 5 prefoldin 5 0.8 0.32 -0.34
94 AT2G20490 nucleolar RNA-binding Nop10p family protein EMBRYO SAC DEVELOPMENT ARREST 27,
NOP10		 0.8 0.31 -0.32
95 AT2G19720 ribosomal protein S15A B ribosomal protein S15A B 0.8 0.35 -0.32
96 AT2G40290 Eukaryotic translation initiation factor 2 subunit 1 0.8 0.31 -0.31
97 AT2G19740 Ribosomal protein L31e family protein 0.8 0.3 -0.33
98 AT4G02280 sucrose synthase 3 ATSUS3, sucrose synthase 3 -0.79 0.32 -0.32
99 AT1G28960 nudix hydrolase homolog 15 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 15, nudix
hydrolase homolog 15, nudix
hydrolase homolog 15		 -0.79 0.29 -0.32
100 AT1G17550 homology to ABI2 homology to ABI2 -0.79 0.32 -0.35
101 AT3G44100 MD-2-related lipid recognition domain-containing protein -0.78 0.31 -0.3
102 AT3G23920 beta-amylase 1 beta-amylase 1, BETA-AMYLASE 7,
TR-BAMY		 -0.78 0.31 -0.3
103 AT1G08230 Transmembrane amino acid transporter family protein ATGAT1, L-GAMMA-AMINOBUTYRIC ACID
TRANSPORTER 1		 -0.78 0.29 -0.32
104 AT4G17030 expansin-like B1 AT-EXPR, expansin-like B1,
ATEXPR1, ATHEXP BETA 3.1,
expansin-like B1, EXPR		 -0.78 0.32 -0.29
105 AT3G11420 Protein of unknown function (DUF604) -0.78 0.33 -0.3
106 AT3G16940 calmodulin binding;transcription regulators -0.77 0.29 -0.31
107 AT2G25625 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED
DURING: LP.06 six leaves visible, LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage; Has 24 Blast hits to 24 proteins in 9 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.77 0.3 -0.33
108 AT1G03380 homolog of yeast autophagy 18 (ATG18) G homolog of yeast autophagy 18
(ATG18) G, homolog of yeast
autophagy 18 (ATG18) G		 -0.77 0.33 -0.29
109 AT4G19860 alpha/beta-Hydrolases superfamily protein -0.77 0.3 -0.32
110 AT2G46270 G-box binding factor 3 G-box binding factor 3 -0.77 0.3 -0.33
111 AT1G07040 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 14 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G27030.1); Has 540 Blast hits to 538 proteins in
187 species: Archae - 0; Bacteria - 333; Metazoa - 0; Fungi
- 0; Plants - 67; Viruses - 0; Other Eukaryotes - 140
(source: NCBI BLink).		 -0.77 0.31 -0.33
112 AT5G66400 Dehydrin family protein ARABIDOPSIS THALIANA
DROUGHT-INDUCED 8, RESPONSIVE TO
ABA 18		 -0.76 0.31 -0.31
113 AT1G18710 myb domain protein 47 myb domain protein 47, myb domain
protein 47		 -0.76 0.32 -0.3
114 AT2G46680 homeobox 7 homeobox 7, ARABIDOPSIS THALIANA
HOMEOBOX 7, homeobox 7		 -0.76 0.31 -0.31
115 AT3G49590 Autophagy-related protein 13 autophagy-related 13 -0.76 0.31 -0.32
116 AT5G01990 Auxin efflux carrier family protein -0.76 0.32 -0.32
117 AT3G09770 RING/U-box superfamily protein LOSS OF GDU 2 -0.76 0.32 -0.3
118 AT2G40830 RING-H2 finger C1A RING-H2 finger C1A -0.76 0.31 -0.3
119 AT1G73980 Phosphoribulokinase / Uridine kinase family -0.75 0.35 -0.3
120 AT5G13800 pheophytinase Co-regulated with NYE1,
pheophytinase		 -0.75 0.31 -0.31
121 AT2G22430 homeobox protein 6 homeobox protein 6, homeobox
protein 6		 -0.75 0.3 -0.31
122 AT5G28510 beta glucosidase 24 beta glucosidase 24 -0.75 0.29 -0.34
123 AT1G47960 cell wall / vacuolar inhibitor of fructosidase 1 CELL WALL / VACUOLAR INHIBITOR OF
FRUCTOSIDASE 1, cell wall /
vacuolar inhibitor of fructosidase
1		 -0.75 0.3 -0.32
124 AT1G07430 highly ABA-induced PP2C gene 2 highly ABA-induced PP2C gene 2 -0.75 0.31 -0.29
125 AT1G28260 Telomerase activating protein Est1 -0.75 0.35 -0.31
126 AT1G69260 ABI five binding protein ABI five binding protein -0.74 0.33 -0.33
127 AT3G19620 Glycosyl hydrolase family protein -0.74 0.32 -0.32
128 AT5G57050 Protein phosphatase 2C family protein ABA INSENSITIVE 2, AtABI2 -0.74 0.33 -0.32
129 AT3G46450 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.74 0.33 -0.32
130 AT1G58360 amino acid permease 1 amino acid permease 1, NEUTRAL
AMINO ACID TRANSPORTER 2		 -0.74 0.32 -0.33
131 AT2G35680 Phosphotyrosine protein phosphatases superfamily protein -0.74 0.33 -0.31
132 AT2G39450 Cation efflux family protein ATMTP11, MTP11 -0.74 0.31 -0.32
133 AT1G12050 fumarylacetoacetase, putative -0.73 0.32 -0.31
134 AT3G20300 Protein of unknown function (DUF3537) -0.73 0.32 -0.33
135 AT5G59310 lipid transfer protein 4 lipid transfer protein 4 -0.73 0.31 -0.3
136 AT3G61890 homeobox 12 homeobox 12, ARABIDOPSIS THALIANA
HOMEOBOX 12, homeobox 12		 -0.73 0.31 -0.3
137 AT4G19390 Uncharacterised protein family (UPF0114) -0.72 0.33 -0.32
138 AT1G27150 Tetratricopeptide repeat (TPR)-like superfamily protein -0.72 0.31 -0.32
139 AT2G38790 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.72 0.32 -0.34
140 AT1G15060 Uncharacterised conserved protein UCP031088, alpha/beta
hydrolase		 -0.72 0.33 -0.32
141 AT2G30550 alpha/beta-Hydrolases superfamily protein -0.72 0.32 -0.32
142 AT1G08460 histone deacetylase 8 ATHDA8, histone deacetylase 8,
HISTONE DEACETYLASE 8		 -0.72 0.32 -0.29
143 AT1G31750 proline-rich family protein -0.72 0.31 -0.3
144 AT3G06170 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 -0.71 0.33 -0.31
145 AT3G14067 Subtilase family protein -0.71 0.31 -0.32
146 AT4G27990 YGGT family protein ATYLMG1-2, YLMG1-2 -0.71 0.3 -0.33
147 AT1G73740 UDP-Glycosyltransferase superfamily protein -0.71 0.32 -0.34
148 AT4G12580 unknown protein; Has 24 Blast hits to 18 proteins in 5
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 15 (source:
NCBI BLink).		 -0.71 0.3 -0.31
149 AT5G53120 spermidine synthase 3 SPERMIDINE SYNTHASE 3, spermidine
synthase 3, SPMS		 -0.71 0.32 -0.31
150 AT1G62310 transcription factor jumonji (jmjC) domain-containing
protein		 -0.7 0.3 -0.33
151 AT1G48000 myb domain protein 112 myb domain protein 112, myb domain
protein 112		 -0.7 0.31 -0.31
152 AT4G24450 phosphoglucan, water dikinase ATGWD2, GWD3, phosphoglucan, water
dikinase		 -0.7 0.31 -0.3
153 AT5G51890 Peroxidase superfamily protein -0.7 0.3 -0.32
154 AT2G04350 AMP-dependent synthetase and ligase family protein long-chain acyl-CoA synthetase 8 -0.7 0.3 -0.32
155 AT1G54160 nuclear factor Y, subunit A5 nuclear factor Y, subunit A5,
NUCLEAR FACTOR Y A5		 -0.7 0.32 -0.3
156 AT3G03870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G18130.1); Has 41 Blast hits
to 41 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.3 -0.3
157 AT3G05640 Protein phosphatase 2C family protein -0.7 0.33 -0.3
158 AT3G01560 Protein of unknown function (DUF1421) -0.7 0.31 -0.33
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
159 C0123 Isoleucine D,L-Isoleucine L-Isoleucine tRNA charging,
isoleucine biosynthesis I (from threonine),
jasmonoyl-amino acid conjugates biosynthesis I,
isoleucine degradation I 		-0.82 0.44 -0.42 C0123
160 C0189 Nicotinic acid - Nicotinate pyridine nucleotide cycling (plants),
aldoxime degradation 		-0.75 0.31 -0.3 C0189
161 C0054 Agmatine - Agmatine putrescine biosynthesis I,
putrescine biosynthesis II,
superpathway of polyamine biosynthesis 		-0.71 0.31 -0.33 C0054