AT4G25410 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G25410
Description basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G25410 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 1 0.29 -0.3
2 AT3G59770 sacI homology domain-containing protein / WW
domain-containing protein		 ARABIDOPSIS THALIANA SUPPRESSOR OF
ACTIN 9, SUPPRESSOR OF ACTIN 9		 -0.68 0.3 -0.32
3 AT3G15980 Coatomer, beta' subunit -0.67 0.3 -0.31
4 AT4G29790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits
to 357 proteins in 124 species: Archae - 0; Bacteria - 74;
Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other
Eukaryotes - 190 (source: NCBI BLink).		 -0.67 0.31 -0.31
5 AT4G30790 INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Autophagy-related protein 17
(InterPro:IPR007240), Autophagy-related protein 11
(InterPro:IPR019460); Has 8793 Blast hits to 6268 proteins
in 570 species: Archae - 89; Bacteria - 657; Metazoa -
4844; Fungi - 808; Plants - 441; Viruses - 15; Other
Eukaryotes - 1939 (source: NCBI BLink).		 -0.66 0.34 -0.31
6 AT4G14220 RING-H2 group F1A RING-H2 group F1A -0.65 0.32 -0.31
7 AT1G79600 Protein kinase superfamily protein -0.65 0.32 -0.33
8 AT3G02260 auxin transport protein (BIG) ATTENUATED SHADE AVOIDANCE 1, BIG,
CORYMBOSA1, DARK OVER-EXPRESSION
OF CAB 1, LOW PHOSPHATE-RESISTANT
ROOT 1, TRANSPORT INHIBITOR
RESPONSE 3, UMBRELLA 1		 -0.65 0.29 -0.32
9 AT2G04880 zinc-dependent activator protein-1 ATWRKY1, WRKY1, zinc-dependent
activator protein-1		 -0.64 0.32 -0.32
10 AT4G38600 HEAT repeat ;HECT-domain (ubiquitin-transferase) KAKTUS, UBIQUITIN-PROTEIN LIGASE 3 -0.64 0.32 -0.32
11 AT5G15400 U-box domain-containing protein -0.64 0.31 -0.3
12 AT5G65620 Zincin-like metalloproteases family protein -0.64 0.32 -0.31
13 AT4G32640 Sec23/Sec24 protein transport family protein -0.63 0.31 -0.33
14 AT3G19170 presequence protease 1 presequence protease 1, ATZNMP,
presequence protease 1		 -0.63 0.33 -0.32
15 AT3G14720 MAP kinase 19 ARABIDOPSIS THALIANA MAP KINASE
19, MAP kinase 19		 -0.63 0.33 -0.3
16 AT2G28390 SAND family protein -0.62 0.31 -0.34
17 AT1G54470 RNI-like superfamily protein resistance to Peronospora
parasitica 27		 0.62 0.3 -0.34
18 AT1G77300 histone methyltransferases(H3-K4 specific);histone
methyltransferases(H3-K36 specific)		 ASH1 HOMOLOG 2, CAROTENOID
CHLOROPLAST REGULATORY1, EARLY
FLOWERING IN SHORT DAYS, LAZARUS
2, SET DOMAIN GROUP 8		 -0.62 0.3 -0.32
19 AT5G58090 O-Glycosyl hydrolases family 17 protein 0.62 0.33 -0.33
20 AT3G04030 Homeodomain-like superfamily protein -0.61 0.31 -0.31
21 AT1G36940 unknown protein; Has 21 Blast hits to 21 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.61 0.33 -0.3
22 AT5G60630 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; BEST Arabidopsis thaliana protein
match is: hydroxyproline-rich glycoprotein family protein
(TAIR:AT3G45230.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.61 0.31 -0.3
23 AT2G36850 glucan synthase-like 8 GLUCAN SYNTHASE-LIKE 8, ATGSL8,
CHORUS, GSL08, glucan
synthase-like 8		 -0.61 0.31 -0.3
24 AT1G58230 binding -0.61 0.32 -0.32
25 AT2G02560 cullin-associated and neddylation dissociated CULLIN-ASSOCIATED AND NEDDYLATION
DISSOCIATED 1, cullin-associated
and neddylation dissociated, ETA2,
HEMIVENATA, TIP120		 -0.6 0.3 -0.29
26 AT4G17140 pleckstrin homology (PH) domain-containing protein -0.6 0.34 -0.32
27 AT2G29190 pumilio 2 pumilio 2, pumilio 2 -0.6 0.32 -0.3
28 AT5G45790 Ubiquitin carboxyl-terminal hydrolase family protein 0.6 0.32 -0.32
29 AT1G73910 actin-related proteins 4A actin-related proteins 4A,
actin-related proteins 4A		 0.6 0.31 -0.3
30 AT5G51430 conserved oligomeric Golgi complex component-related / COG
complex component-related		 EMBRYO YELLOW -0.59 0.32 -0.32
31 AT1G22870 Protein kinase family protein with ARM repeat domain -0.59 0.31 -0.32
32 AT4G39420 unknown protein; Has 46 Blast hits to 40 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.59 0.31 -0.3
33 AT5G56290 peroxin 5 ARABIDOPSIS PEROXIN 5, EMBRYO
DEFECTIVE 2790, peroxin 5		 -0.59 0.31 -0.31
34 AT3G60240 eukaryotic translation initiation factor 4G CUCUMOVIRUS MULTIPLICATION 2,
eukaryotic translation initiation
factor 4G		 -0.59 0.31 -0.3
35 AT3G46220 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2042 (InterPro:IPR018611); Has 559
Blast hits to 533 proteins in 154 species: Archae - 3;
Bacteria - 32; Metazoa - 305; Fungi - 42; Plants - 50;
Viruses - 3; Other Eukaryotes - 124 (source: NCBI BLink).		 -0.59 0.31 -0.3
36 AT5G58270 ABC transporter of the mitochondrion 3 ATP-binding cassette B25,
ARABIDOPSIS THALIANA ABC
TRANSPORTER OF THE MITOCHONDRION
3, ABC transporter of the
mitochondrion 3, STARIK 1		 -0.58 0.31 -0.32
37 AT3G10380 subunit of exocyst complex 8 SUBUNIT OF EXOCYST COMPLEX 8,
subunit of exocyst complex 8		 -0.58 0.32 -0.31
38 AT1G80930 MIF4G domain-containing protein / MA3 domain-containing
protein		 -0.58 0.32 -0.3
39 AT2G45610 alpha/beta-Hydrolases superfamily protein -0.57 0.31 -0.32
40 AT1G36160 acetyl-CoA carboxylase 1 acetyl-CoA carboxylase 1, AT-ACC1,
EMBRYO DEFECTIVE 22, GURKE,
GLOSSYHEAD 1, PASTICCINO 3		 -0.57 0.3 -0.31
41 AT5G55780 Cysteine/Histidine-rich C1 domain family protein 0.57 0.35 -0.31
42 AT4G21180 DnaJ / Sec63 Brl domains-containing protein ATERDJ2B -0.57 0.33 -0.3
43 AT4G00630 K+ efflux antiporter 2 ATKEA2, K+ efflux antiporter 2 -0.57 0.3 -0.31
44 AT5G42220 Ubiquitin-like superfamily protein -0.57 0.32 -0.33
45 AT4G03550 glucan synthase-like 5 glucan synthase-like 5, ATGSL5,
GSL05, glucan synthase-like 5,
GLUCAN SYNTHASE-LIKE 5, POWDERY
MILDEW RESISTANT 4		 -0.57 0.31 -0.34
46 AT1G71820 SEC6 SEC6 -0.57 0.29 -0.33
47 AT4G22790 MATE efflux family protein 0.57 0.34 -0.32
48 AT1G42250 transposable element gene -0.57 0.31 -0.32
49 AT5G18475 Pentatricopeptide repeat (PPR) superfamily protein -0.57 0.31 -0.32
50 AT3G05670 RING/U-box protein -0.57 0.29 -0.31
51 AT5G58040 homolog of yeast FIP1 [V] homolog of yeast FIP1 [V],
ATFIPS5, homolog of yeast FIP1
[V], FIPS5		 -0.57 0.32 -0.32
52 AT5G23030 tetraspanin12 tetraspanin12 0.56 0.31 -0.32
53 AT5G48960 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase -0.56 0.32 -0.31
54 AT2G07360 SH3 domain-containing protein -0.56 0.31 -0.3
55 AT2G40280 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.56 0.31 -0.32
56 AT3G55780 Glycosyl hydrolase superfamily protein -0.56 0.33 -0.34
57 AT4G29620 Cytidine/deoxycytidylate deaminase family protein -0.56 0.32 -0.31
58 AT1G70110 Concanavalin A-like lectin protein kinase family protein 0.56 0.32 -0.3
59 AT3G55320 P-glycoprotein 20 ATP-binding cassette B20,
P-glycoprotein 20		 -0.56 0.32 -0.3
60 AT1G03850 Glutaredoxin family protein glutaredoxin 13, glutaredoxin 13 0.55 0.32 -0.32
61 AT3G42400 transposable element gene 0.54 0.31 -0.3
62 AT3G19500 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.54 0.32 -0.32
63 AT3G07600 Heavy metal transport/detoxification superfamily protein 0.54 0.33 -0.29
64 AT3G30260 AGAMOUS-like 79 AGAMOUS-like 79 0.54 0.3 -0.34
65 AT3G45700 Major facilitator superfamily protein 0.54 0.3 -0.31
66 AT5G52020 Integrase-type DNA-binding superfamily protein 0.53 0.32 -0.31
67 AT4G33730 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.53 0.28 -0.31
68 AT2G30280 RNA-directed DNA methylation 4 DEFECTIVE IN MERISTEM SILENCING 4,
RNA-directed DNA methylation 4		 0.51 0.3 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
69 C0144 Maltose D-Maltose α-Maltose starch degradation II -0.63 0.44 -0.46 C0144
70 C0187 Neoeriocitrin - - - 0.53 0.41 -0.44