AT4G25040 : -
Query Information
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AGICode AT4G25040
Description Uncharacterised protein family (UPF0497)
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G25040 Uncharacterised protein family (UPF0497) 1 0.32 -0.32
2 AT3G14880 BEST Arabidopsis thaliana protein match is: transcription
factor-related (TAIR:AT4G18650.1); Has 560 Blast hits to
560 proteins in 40 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 558; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.73 0.31 -0.32
3 AT5G44850 Protein with RNI-like/FBD-like domains 0.72 0.32 -0.31
4 AT3G48940 Remorin family protein 0.71 0.3 -0.34
5 AT2G29780 Galactose oxidase/kelch repeat superfamily protein 0.71 0.31 -0.32
6 AT1G44980 pectin methylesterase 7 A. THALIANA PECTIN METHYLESTERASE
7, pectin methylesterase 7		 0.69 0.3 -0.36
7 AT5G40280 Prenyltransferase family protein ARABIDOPSIS THALIANA FARNESYL
TRANSFERASE BETA SUBUNIT, ENHANCED
RESPONSE TO ABA 1, WIGGUM		 -0.68 0.3 -0.32
8 AT5G08550 GC-rich sequence DNA-binding factor-like protein increased level of polyploidy1-1D 0.67 0.33 -0.31
9 AT5G04370 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 NAMT1 -0.67 0.29 -0.28
10 AT2G05900 SET domain protein 11 SET domain protein 11, SU(VAR)3-9
HOMOLOG 10		 0.65 0.28 -0.31
11 AT2G18820 transposable element gene 0.64 0.3 -0.32
12 AT1G36990 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in
339 species: Archae - 2; Bacteria - 1372; Metazoa - 990;
Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes -
1593 (source: NCBI BLink).		 0.64 0.32 -0.31
13 AT5G62670 H(+)-ATPase 11 H(+)-ATPase 11, H(+)-ATPase 11 0.64 0.29 -0.33
14 AT4G27120 CONTAINS InterPro DOMAIN/s: DDRGK domain
(InterPro:IPR019153); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.63 0.33 -0.29
15 AT3G01460 methyl-CPG-binding domain 9 ATMBD9, methyl-CPG-binding domain
9		 0.63 0.31 -0.3
16 AT1G28040 RING/U-box superfamily protein 0.62 0.3 -0.31
17 AT4G37950 Rhamnogalacturonate lyase family protein 0.62 0.32 -0.28
18 AT5G35830 Ankyrin repeat family protein 0.61 0.32 -0.31
19 AT5G35600 histone deacetylase7 histone deacetylase7 0.6 0.3 -0.3
20 AT2G12320 transposable element gene 0.6 0.32 -0.3
21 AT2G27750 Surfeit locus protein 6 0.6 0.3 -0.31
22 AT5G16860 Tetratricopeptide repeat (TPR)-like superfamily protein 0.59 0.3 -0.33
23 AT4G05170 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.59 0.33 -0.33
24 AT2G04038 basic leucine-zipper 48 basic leucine-zipper 48, basic
leucine-zipper 48		 -0.59 0.3 -0.3
25 AT5G17960 Cysteine/Histidine-rich C1 domain family protein 0.59 0.29 -0.3
26 AT1G16940 F-box/RNI-like/FBD-like domains-containing protein 0.58 0.31 -0.34
27 AT1G69120 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 7, APETALA1 0.58 0.31 -0.32
28 AT3G08750 F-box and associated interaction domains-containing protein 0.57 0.31 -0.31
29 AT5G64050 glutamate tRNA synthetase ATERS, glutamate tRNA synthetase,
OVULE ABORTION 3		 0.57 0.3 -0.31
30 AT4G26830 O-Glycosyl hydrolases family 17 protein 0.57 0.33 -0.3
31 AT3G53350 ROP interactive partner 4 ROP interactive partner 4 -0.56 0.33 -0.29
32 AT2G28940 Protein kinase superfamily protein -0.56 0.35 -0.29
33 AT5G47280 ADR1-like 3 ADR1-like 3 0.56 0.3 -0.33
34 AT3G61040 cytochrome P450, family 76, subfamily C, polypeptide 7 cytochrome P450, family 76,
subfamily C, polypeptide 7		 0.56 0.33 -0.33
35 AT5G46760 Basic helix-loop-helix (bHLH) DNA-binding family protein MYC3 -0.56 0.3 -0.36
36 AT1G63550 Receptor-like protein kinase-related family protein 0.55 0.32 -0.3
37 AT4G28140 Integrase-type DNA-binding superfamily protein 0.55 0.33 -0.32
38 AT1G48730 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.55 0.3 -0.32
39 AT1G24110 Peroxidase superfamily protein 0.55 0.3 -0.33
40 AT5G35160 Endomembrane protein 70 protein family 0.54 0.32 -0.3
41 AT2G36090 F-box family protein -0.54 0.31 -0.32
42 AT3G08670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G51540.1); Has 48380 Blast
hits to 29827 proteins in 1356 species: Archae - 46;
Bacteria - 5589; Metazoa - 17361; Fungi - 13192; Plants -
2237; Viruses - 905; Other Eukaryotes - 9050 (source: NCBI
BLink).		 0.54 0.31 -0.33
43 AT3G12300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF667
(InterPro:IPR007714); Has 373 Blast hits to 371 proteins in
116 species: Archae - 0; Bacteria - 0; Metazoa - 213; Fungi
- 4; Plants - 71; Viruses - 0; Other Eukaryotes - 85
(source: NCBI BLink).		 0.54 0.31 -0.31
44 AT2G03070 mediator subunit 8 mediator subunit 8 -0.5 0.31 -0.32
45 AT2G16620 Protein kinase superfamily protein -0.49 0.34 -0.33
46 AT2G38060 phosphate transporter 4;2 phosphate transporter 4;2 -0.49 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
47 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		-0.71 0.44 -0.44 C0107
48 C0018 sn-Glycerol-3-phosphate D,L-sn-Glycerol-3-phosphate sn-Glycerol-3-phosphate CDP-diacylglycerol biosynthesis II,
phosphatidylglycerol biosynthesis II (non-plastidic),
triacylglycerol biosynthesis,
glycerol degradation IV,
glycerol-3-phosphate shuttle,
a quinone + sn-glycerol-3-phosphate -> a quinol + dihydroxyacetone phosphate,
CDP-diacylglycerol biosynthesis I,
cardiolipin biosynthesis II,
phosphatidylglycerol biosynthesis I (plastidic),
sn-glycerol-3-phosphate + a ubiquinone -> a ubiquinol + dihydroxyacetone phosphate,
an electron-transfer-related quinone + sn-glycerol-3-phosphate -> an electron-transfer-related quinol + dihydroxyacetone phosphate 		-0.64 0.43 -0.45 C0018