AT4G24500 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G24500
Description hydroxyproline-rich glycoprotein family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G24500 hydroxyproline-rich glycoprotein family protein 1 0.31 -0.31
2 AT3G30750 transposable element gene 0.67 0.34 -0.3
3 AT1G43260 hAT transposon superfamily protein -0.67 0.31 -0.31
4 AT2G14640 transposable element gene 0.66 0.33 -0.32
5 AT3G24460 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 -0.66 0.31 -0.31
6 AT3G44770 Protein of unknown function (DUF626) -0.64 0.34 -0.3
7 AT3G18450 PLAC8 family protein 0.64 0.32 -0.34
8 AT4G38680 glycine rich protein 2 ARABIDOPSIS THALIANA COLD SHOCK
PROTEIN 2, COLD SHOCK DOMAIN
PROTEIN 2, COLD SHOCK PROTEIN 2,
glycine rich protein 2		 0.62 0.31 -0.31
9 AT3G48960 Ribosomal protein L13e family protein -0.62 0.3 -0.31
10 AT3G56520 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 0.62 0.3 -0.32
11 AT2G37320 Tetratricopeptide repeat (TPR)-like superfamily protein 0.61 0.34 -0.29
12 AT2G18850 SET domain-containing protein 0.61 0.3 -0.32
13 AT2G19630 F-box and associated interaction domains-containing protein -0.61 0.3 -0.33
14 AT3G17590 transcription regulatory protein SNF5, putative (BSH) BUSHY GROWTH, CHE1 0.61 0.34 -0.3
15 AT3G49760 basic leucine-zipper 5 basic leucine-zipper 5, basic
leucine-zipper 5		 -0.61 0.3 -0.32
16 AT5G51320 transposable element gene 0.61 0.32 -0.33
17 AT5G41320 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.61 0.3 -0.33
18 AT2G36760 UDP-glucosyl transferase 73C2 UDP-glucosyl transferase 73C2 -0.61 0.32 -0.32
19 AT1G42700 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
response to cold; LOCATED IN: nucleus; BEST Arabidopsis
thaliana protein match is: Plant transposase (Ptta/En/Spm
family) (TAIR:AT1G40087.1); Has 10 Blast hits to 10
proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.61 0.31 -0.32
20 AT4G36370 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.31 -0.32
21 AT4G08330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G17705.1); Has 98 Blast
hits to 98 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.33 -0.34
22 AT3G21470 Pentatricopeptide repeat (PPR-like) superfamily protein 0.6 0.31 -0.32
23 AT5G13150 exocyst subunit exo70 family protein C1 exocyst subunit exo70 family
protein C1, exocyst subunit exo70
family protein C1		 -0.6 0.33 -0.32
24 AT2G48060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: shoot, sperm cell;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341
proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa
- 318; Fungi - 0; Plants - 93; Viruses - 0; Other
Eukaryotes - 105 (source: NCBI BLink).		 -0.6 0.32 -0.31
25 AT5G02150 Fes1C Fes1C 0.59 0.31 -0.33
26 AT5G58003 C-terminal domain phosphatase-like 4 C-terminal domain phosphatase-like
4		 0.59 0.3 -0.33
27 AT2G03460 Galactose oxidase/kelch repeat superfamily protein -0.59 0.34 -0.32
28 AT3G24810 Cyclin-dependent kinase inhibitor family protein ICK3, kip-related protein 5 -0.59 0.31 -0.29
29 AT1G14530 Protein of unknown function (DUF1084) TOM THREE HOMOLOG 1 0.59 0.33 -0.31
30 AT1G79990 structural molecules 0.59 0.33 -0.3
31 AT3G16380 poly(A) binding protein 6 poly(A) binding protein 6 -0.59 0.33 -0.32
32 AT4G18710 Protein kinase superfamily protein SHAGGY-LIKE KINASE 21,
BRASSINOSTEROID-INSENSITIVE 2,
DWARF 12, SHAGGY-LIKE KINASE 21,
ULTRACURVATA 1		 0.58 0.3 -0.31
33 AT3G55180 alpha/beta-Hydrolases superfamily protein -0.58 0.31 -0.31
34 AT1G42960 expressed protein localized to the inner membrane of the
chloroplast.		 0.58 0.3 -0.31
35 AT4G17245 RING/U-box superfamily protein 0.58 0.31 -0.33
36 AT1G21220 transposable element gene 0.58 0.32 -0.32
37 AT3G09130 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G42786.1); Has 7 Blast hits to
7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.58 0.29 -0.3
38 AT1G62970 Chaperone DnaJ-domain superfamily protein 0.58 0.32 -0.32
39 AT3G44570 Arabidopsis retrotransposon ORF-1 protein 0.58 0.34 -0.34
40 AT1G44050 Cysteine/Histidine-rich C1 domain family protein 0.58 0.29 -0.32
41 AT3G19330 Protein of unknown function (DUF677) 0.58 0.32 -0.33
42 AT1G74310 heat shock protein 101 heat shock protein 101, HOT1, heat
shock protein 101		 -0.57 0.31 -0.31
43 AT5G18580 tonneau 2 (TON2) EMBRYO DEFECTIVE 40, FASS 1, FASS
2, FS1, GORDO, TONNEAU 2		 0.57 0.33 -0.3
44 AT2G36400 growth-regulating factor 3 growth-regulating factor 3,
growth-regulating factor 3		 0.57 0.31 -0.29
45 AT1G79700 Integrase-type DNA-binding superfamily protein 0.57 0.34 -0.32
46 AT5G07930 MEI2 C-terminal RRM only like 2 MEI2 C-terminal RRM only like 2 0.57 0.32 -0.31
47 AT4G09130 RING/U-box superfamily protein -0.57 0.33 -0.31
48 AT5G54950 Aconitase family protein -0.57 0.3 -0.31
49 AT5G05950 maternal effect embryo arrest 60 maternal effect embryo arrest 60 0.57 0.32 -0.3
50 AT4G28720 Flavin-binding monooxygenase family protein YUCCA 8 0.57 0.31 -0.29
51 AT5G07510 glycine-rich protein 14 ARABIDOPSIS THALIANA GLYCINE-RICH
PROTEIN 4, ARABIDOPSIS THALIANA
GLYCINE-RICH PROTEIN 14,
GLYCINE-RICH PROTEIN 4,
glycine-rich protein 14		 -0.56 0.32 -0.33
52 AT3G47800 Galactose mutarotase-like superfamily protein 0.56 0.31 -0.31
53 AT2G18450 succinate dehydrogenase 1-2 succinate dehydrogenase 1-2 0.56 0.33 -0.32
54 AT5G37900 TRAF-like superfamily protein 0.56 0.31 -0.33
55 AT2G34670 Protein of unknown function (DUF630 and DUF632) 0.56 0.33 -0.31
56 AT3G42440 transposable element gene -0.56 0.31 -0.31
57 AT4G10260 pfkB-like carbohydrate kinase family protein -0.56 0.29 -0.34
58 AT1G05770 Mannose-binding lectin superfamily protein 0.55 0.31 -0.32
59 AT4G38190 cellulose synthase like D4 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE-LIKE D4, cellulose
synthase like D4		 -0.55 0.32 -0.31
60 AT2G10880 transposable element gene -0.55 0.32 -0.31
61 AT5G29020 transposable element gene 0.55 0.32 -0.33
62 AT5G50320 radical SAM domain-containing protein / GCN5-related
N-acetyltransferase (GNAT) family protein		 Elongator protein 3,
enhancer-of-asymmetric leaves-two
1, ELONGATA 3, Elongator protein
3, HISTONE ACETYLTRANSFERASE 8,
HISTONE ACETYLTRANSFERASE OF THE
GNAT FAMILY 3		 0.55 0.31 -0.33
63 AT4G38590 beta-galactosidase 14 beta-galactosidase 14 -0.54 0.31 -0.32
64 AT4G39590 Galactose oxidase/kelch repeat superfamily protein 0.54 0.32 -0.32
65 AT1G34270 Exostosin family protein 0.54 0.33 -0.32
66 AT5G17460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to salt stress; LOCATED IN:
mitochondrion; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.54 0.29 -0.32
67 AT4G18860 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.54 0.33 -0.31
68 AT3G46350 Leucine-rich repeat protein kinase family protein 0.54 0.33 -0.33
69 AT3G42820 transposable element gene -0.54 0.33 -0.32
70 AT5G58470 TBP-associated factor 15B TBP-associated factor 15B 0.54 0.31 -0.31
71 AT4G03770 transposable element gene 0.54 0.32 -0.3
72 AT3G59270 FBD-like domain family protein -0.54 0.32 -0.31
73 AT5G43550 F-box associated ubiquitination effector family protein -0.54 0.3 -0.31
74 AT1G15700 ATPase, F1 complex, gamma subunit protein ATPC2 0.54 0.32 -0.34
75 AT1G15220 cytochrome c biogenesis protein family ATCCMH, CCMH 0.53 0.31 -0.29
76 AT5G57590 adenosylmethionine-8-amino-7-oxononanoate transaminases biotin auxotroph 1 0.53 0.32 -0.31
77 AT5G56770 BEST Arabidopsis thaliana protein match is: effector of
transcription2 (TAIR:AT5G56780.1); Has 41 Blast hits to 41
proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.53 0.3 -0.3
78 AT3G61740 SET domain protein 14 ATX3, SET domain protein 14 -0.53 0.34 -0.29
79 AT4G36790 Major facilitator superfamily protein 0.53 0.31 -0.32
80 AT2G22390 pseudogene, putative GTP-binding protein, similar to
GTP-binding protein GI:303738 from (Pisum sativum); blastp
match of 75% identity and 3.6e-56 P-value to
GP|303738|dbj|BAA02110.1||D12542 GTP-binding protein {Pisum
sativum}		 ATRABA4E, RAB GTPase homolog A4E -0.53 0.33 -0.33
81 AT1G17370 oligouridylate binding protein 1B oligouridylate binding protein 1B 0.53 0.31 -0.32
82 AT4G09540 transposable element gene 0.53 0.33 -0.3
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
83 C0136 Lactic acid D,L-Lactic acid Lactate pyruvate fermentation to lactate 0.73 0.45 -0.48 C0136