AT4G24770 : ARABIDOPSIS THALIANA RNA BINDING PROTEIN, APPROXIMATELY 31 KD.....
Query Information
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AGICode AT4G24770
Description 31-kDa RNA binding protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G24770 31-kDa RNA binding protein ARABIDOPSIS THALIANA RNA BINDING
PROTEIN, APPROXIMATELY 31 KD,
ATRBP33, CP31, 31-kDa RNA binding
protein		 1 0.32 -0.32
2 AT1G74970 ribosomal protein S9 ribosomal protein S9, TWN3 0.95 0.3 -0.32
3 AT4G17560 Ribosomal protein L19 family protein 0.94 0.32 -0.31
4 AT5G65220 Ribosomal L29 family protein 0.93 0.33 -0.33
5 AT2G48070 resistance to phytophthora 1 RESISTANCE TO PHYTOPHTHORA 1 0.93 0.31 -0.34
6 AT5G47190 Ribosomal protein L19 family protein 0.93 0.31 -0.32
7 AT1G05190 Ribosomal protein L6 family embryo defective 2394 0.93 0.31 -0.33
8 AT5G14910 Heavy metal transport/detoxification superfamily protein 0.92 0.32 -0.31
9 AT1G48350 Ribosomal L18p/L5e family protein EMBRYO DEFECTIVE 3105 0.92 0.32 -0.31
10 AT5G14320 Ribosomal protein S13/S18 family EMBRYO DEFECTIVE 3137 0.92 0.35 -0.3
11 AT5G55220 trigger factor type chaperone family protein 0.92 0.32 -0.32
12 AT4G34190 stress enhanced protein 1 stress enhanced protein 1 0.92 0.3 -0.33
13 AT3G62030 rotamase CYP 4 cyclophilin 20-3, rotamase CYP 4 0.91 0.31 -0.32
14 AT2G35500 shikimate kinase like 2 shikimate kinase-like 2 0.91 0.34 -0.32
15 AT1G75350 Ribosomal protein L31 embryo defective 2184 0.91 0.33 -0.32
16 AT1G69740 Aldolase superfamily protein HEMB1 0.91 0.29 -0.32
17 AT3G63190 ribosome recycling factor, chloroplast precursor Arabidopsis thaliana chloroplast
ribosome recycling factor,
chloroplast ribosome recycling
factor, HIGH CHLOROPHYLL
FLUORESCENCE AND PALE GREEN MUTANT
108, ribosome recycling factor,
chloroplast precursor		 0.91 0.34 -0.31
18 AT1G17650 glyoxylate reductase 2 glyoxylate reductase 2, GLYOXYLATE
REDUCTASE 2		 0.91 0.32 -0.31
19 AT3G25920 ribosomal protein L15 ribosomal protein L15 0.91 0.32 -0.31
20 AT1G64510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.91 0.32 -0.29
21 AT3G44890 ribosomal protein L9 ribosomal protein L9 0.91 0.32 -0.32
22 AT1G79850 ribosomal protein S17 CS17, PIGMENT DEFECTIVE 347,
PLASTID RIBOSOMAL SMALL SUBUNIT
PROTEIN 17, ribosomal protein S17		 0.91 0.3 -0.31
23 AT1G06190 Rho termination factor 0.9 0.29 -0.32
24 AT4G39460 S-adenosylmethionine carrier 1 S-adenosylmethionine carrier 1,
SAM TRANSPORTER1		 0.9 0.29 -0.31
25 AT1G32990 plastid ribosomal protein l11 plastid ribosomal protein l11 0.9 0.28 -0.32
26 AT3G15190 chloroplast 30S ribosomal protein S20, putative 0.9 0.32 -0.33
27 AT1G78630 Ribosomal protein L13 family protein embryo defective 1473 0.9 0.31 -0.3
28 AT2G33450 Ribosomal L28 family 0.9 0.31 -0.32
29 AT2G38140 plastid-specific ribosomal protein 4 plastid-specific ribosomal protein
4		 0.9 0.3 -0.32
30 AT4G30950 fatty acid desaturase 6 fatty acid desaturase 6, FATTY
ACID DESATURASE C, STEAROYL
DESATURASE DEFICIENCY 4		 0.9 0.35 -0.32
31 AT3G63410 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ALBINO OR PALE GREEN MUTANT 1,
E37, INNER ENVELOPE PROTEIN 37,
VITAMIN E DEFECTIVE 3		 0.9 0.31 -0.31
32 AT1G13270 methionine aminopeptidase 1B METHIONINE AMINOPEPTIDASE 1B,
methionine aminopeptidase 1B		 0.89 0.31 -0.33
33 AT3G08740 elongation factor P (EF-P) family protein 0.89 0.29 -0.34
34 AT2G40690 NAD-dependent glycerol-3-phosphate dehydrogenase family
protein		 GLY1, SUPPRESSOR OF FATTY ACID
DESATURASE DEFICIENCY 1		 0.89 0.29 -0.31
35 AT4G34620 small subunit ribosomal protein 16 small subunit ribosomal protein 16 0.89 0.34 -0.32
36 AT1G60230 Radical SAM superfamily protein 0.89 0.29 -0.32
37 AT1G55490 chaperonin 60 beta chaperonin 60 beta,
chaperonin-60beta1, LESION
INITIATION 1		 0.89 0.31 -0.31
38 AT3G59980 Nucleic acid-binding, OB-fold-like protein 0.89 0.34 -0.29
39 AT5G52520 Class II aaRS and biotin synthetases superfamily protein OVULE ABORTION 6, PROLYL-TRNA
SYNTHETASE 1		 0.89 0.29 -0.34
40 AT5G08280 hydroxymethylbilane synthase hydroxymethylbilane synthase 0.89 0.33 -0.3
41 AT4G37510 Ribonuclease III family protein 0.89 0.31 -0.31
42 AT2G43030 Ribosomal protein L3 family protein 0.89 0.33 -0.32
43 AT1G14270 CAAX amino terminal protease family protein 0.89 0.34 -0.35
44 AT5G17710 Co-chaperone GrpE family protein embryo defective 1241 0.89 0.31 -0.33
45 AT3G27160 Ribosomal protein S21 family protein GLUCOSE HYPERSENSITIVE 1 0.89 0.32 -0.3
46 AT5G54600 Translation protein SH3-like family protein 0.89 0.3 -0.33
47 AT3G48730 glutamate-1-semialdehyde 2,1-aminomutase 2 glutamate-1-semialdehyde
2,1-aminomutase 2		 0.89 0.28 -0.32
48 AT3G56910 plastid-specific 50S ribosomal protein 5 plastid-specific 50S ribosomal
protein 5		 0.89 0.32 -0.31
49 AT2G42770 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0.88 0.31 -0.31
50 AT2G33430 differentiation and greening-like 1 DIFFERENTIATION AND GREENING-LIKE,
differentiation and greening-like
1		 0.88 0.3 -0.31
51 AT4G01310 Ribosomal L5P family protein 0.88 0.32 -0.33
52 AT2G31170 Cysteinyl-tRNA synthetase, class Ia family protein FIONA, cysteinyl t-RNA synthetase 0.88 0.31 -0.33
53 AT5G57170 Tautomerase/MIF superfamily protein 0.88 0.34 -0.32
54 AT2G28000 chaperonin-60alpha CHLOROPLAST CHAPERONIN 60ALPHA,
chaperonin-60alpha,
chaperonin-60alpha1, SCHLEPPERLESS		 0.88 0.35 -0.3
55 AT3G17210 heat stable protein 1 A. THALIANA HEAT STABLE PROTEIN 1,
heat stable protein 1		 0.88 0.3 -0.31
56 AT1G29070 Ribosomal protein L34 0.88 0.3 -0.33
57 AT5G13510 Ribosomal protein L10 family protein EMBRYO DEFECTIVE 3136 0.88 0.34 -0.31
58 AT3G51140 Protein of unknown function (DUF3353) 0.88 0.31 -0.34
59 AT3G47650 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.87 0.32 -0.32
60 AT4G25050 acyl carrier protein 4 acyl carrier protein 4 0.87 0.31 -0.32
61 AT4G34290 SWIB/MDM2 domain superfamily protein 0.87 0.31 -0.31
62 AT1G62780 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 14 growth stages; Has 94
Blast hits to 94 proteins in 35 species: Archae - 6;
Bacteria - 10; Metazoa - 21; Fungi - 2; Plants - 48;
Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).		 0.87 0.32 -0.3
63 AT3G60370 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.87 0.34 -0.31
64 AT5G47110 Chlorophyll A-B binding family protein LIL3:2 0.87 0.32 -0.3
65 AT2G22230 Thioesterase superfamily protein 0.87 0.32 -0.33
66 AT1G36390 Co-chaperone GrpE family protein 0.87 0.31 -0.31
67 AT3G14110 Tetratricopeptide repeat (TPR)-like superfamily protein FLUORESCENT IN BLUE LIGHT 0.87 0.3 -0.29
68 AT3G25480 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.87 0.32 -0.32
69 AT3G63490 Ribosomal protein L1p/L10e family EMBRYO DEFECTIVE 3126 0.87 0.31 -0.33
70 AT4G32900 Peptidyl-tRNA hydrolase II (PTH2) family protein 0.87 0.31 -0.3
71 AT2G45270 glycoprotease 1 glycoprotease 1 0.86 0.33 -0.3
72 AT2G24020 Uncharacterised BCR, YbaB family COG0718 0.86 0.31 -0.3
73 AT4G32915 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
regulation of translational fidelity; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Glu-tRNAGln amidotransferase, C subunit
(InterPro:IPR003837); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.86 0.33 -0.31
74 AT2G41950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 53
Blast hits to 53 proteins in 24 species: Archae - 0;
Bacteria - 27; Metazoa - 0; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.86 0.3 -0.32
75 AT3G25660 Amidase family protein 0.86 0.33 -0.31
76 AT3G15110 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 20 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF3082
(InterPro:IPR021434); Has 77 Blast hits to 77 proteins in
38 species: Archae - 0; Bacteria - 37; Metazoa - 0; Fungi -
0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.86 0.3 -0.33
77 AT2G39140 pseudouridine synthase family protein PIGMENT DEFECTIVE 328, SUPPRESSOR
OF VARIEGATION 1		 0.86 0.32 -0.31
78 AT3G53900 uracil phosphoribosyltransferase PYRIMIDINE R, uracil
phosphoribosyltransferase		 0.86 0.3 -0.32
79 AT5G51100 Fe superoxide dismutase 2 Fe superoxide dismutase 2 0.86 0.29 -0.3
80 AT2G24090 Ribosomal protein L35 0.86 0.32 -0.3
81 AT5G16715 ATP binding;valine-tRNA ligases;aminoacyl-tRNA
ligases;nucleotide binding;ATP binding;aminoacyl-tRNA
ligases		 embryo defective 2247 0.86 0.32 -0.31
82 AT2G21280 NAD(P)-binding Rossmann-fold superfamily protein ATSULA, GIANT CHLOROPLAST 1, SULA 0.86 0.32 -0.32
83 AT5G63310 nucleoside diphosphate kinase 2 ARABIDOPSIS NUCLEOSIDE DIPHOSPHATE
KINASE 2, NUCLEOSIDE DIPHOSPHATE
KINASE IA, NDPK IA IA, NDP KINASE
1A, nucleoside diphosphate kinase
2		 0.86 0.31 -0.31
84 AT2G39670 Radical SAM superfamily protein 0.86 0.32 -0.29
85 AT2G21385 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 49
Blast hits to 49 proteins in 20 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses
- 0; Other Eukaryotes - 5 (source: NCBI BLink).		 0.86 0.33 -0.33
86 AT5G20720 chaperonin 20 ATCPN21, CHLOROPLAST CHAPERONIN
10, CHLOROPLAST CHAPERONIN 10,
chaperonin 20, CPN21		 0.86 0.31 -0.32
87 AT4G30580 Phospholipid/glycerol acyltransferase family protein ATS2, EMBRYO DEFECTIVE 1995,
lysophosphatidic acid
acyltransferase 1		 0.86 0.32 -0.34
88 AT3G07430 YGGT family protein ATYLMG1-1, embryo defective 1990,
YLMG1-1		 0.85 0.34 -0.31
89 AT2G43560 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.85 0.3 -0.31
90 AT3G60750 Transketolase 0.85 0.31 -0.3
91 AT5G66530 Galactose mutarotase-like superfamily protein 0.85 0.31 -0.33
92 AT1G48520 GLU-ADT subunit B GLU-ADT subunit B 0.85 0.3 -0.32
93 AT2G41680 NADPH-dependent thioredoxin reductase C NADPH-dependent thioredoxin
reductase C		 0.85 0.31 -0.3
94 AT4G09730 RH39 RH39 0.85 0.3 -0.3
95 AT5G63570 glutamate-1-semialdehyde-2,1-aminomutase glutamate-1-semialdehyde-2,1-amino
mutase		 0.85 0.29 -0.33
96 AT1G04420 NAD(P)-linked oxidoreductase superfamily protein 0.85 0.32 -0.33
97 AT2G14880 SWIB/MDM2 domain superfamily protein 0.85 0.31 -0.32
98 AT1G33810 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast, chloroplast
envelope; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 39 Blast hits to 39 proteins
in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.85 0.31 -0.32
99 AT3G45050 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 26 Blast hits to 26 proteins
in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.85 0.31 -0.33
100 AT5G18780 F-box/RNI-like superfamily protein -0.84 0.3 -0.32
101 AT3G14060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G54120.1); Has 30 Blast hits
to 30 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.79 0.29 -0.33
102 AT3G03310 lecithin:cholesterol acyltransferase 3 ARABIDOPSIS LECITHIN:CHOLESTEROL
ACYLTRANSFERASE 3,
lecithin:cholesterol
acyltransferase 3		 -0.77 0.33 -0.32
103 AT2G28110 Exostosin family protein FRAGILE FIBER 8, IRREGULAR XYLEM 7 -0.77 0.33 -0.29
104 AT5G02230 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.76 0.3 -0.3
105 AT3G14620 cytochrome P450, family 72, subfamily A, polypeptide 8 cytochrome P450, family 72,
subfamily A, polypeptide 8		 -0.76 0.32 -0.31
106 AT5G53120 spermidine synthase 3 SPERMIDINE SYNTHASE 3, spermidine
synthase 3, SPMS		 -0.76 0.3 -0.33
107 AT1G17020 senescence-related gene 1 SENESCENCE-RELATED GENE 1,
senescence-related gene 1		 -0.75 0.32 -0.29
108 AT5G39520 Protein of unknown function (DUF1997) -0.75 0.33 -0.31
109 AT3G21240 4-coumarate:CoA ligase 2 4-coumarate:CoA ligase 2, AT4CL2 -0.74 0.31 -0.32
110 AT5G65870 phytosulfokine 5 precursor phytosulfokine 5 precursor, PSK5,
phytosulfokine 5 precursor		 -0.74 0.31 -0.32
111 AT3G51440 Calcium-dependent phosphotriesterase superfamily protein -0.73 0.31 -0.32
112 AT4G26270 phosphofructokinase 3 phosphofructokinase 3 -0.73 0.32 -0.32
113 AT4G22820 A20/AN1-like zinc finger family protein -0.73 0.33 -0.33
114 AT5G24160 squalene monoxygenase 6 squalene monoxygenase 6 -0.73 0.31 -0.32
115 AT4G02360 Protein of unknown function, DUF538 -0.72 0.31 -0.3
116 AT3G12760 CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation
protein (InterPro:IPR014764), Protein of unknown function
DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060);
BEST Arabidopsis thaliana protein match is: Domain of
unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast
hits to 855 proteins in 202 species: Archae - 0; Bacteria -
0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0;
Other Eukaryotes - 82 (source: NCBI BLink).		 -0.71 0.32 -0.33
117 AT1G55265 Protein of unknown function, DUF538 -0.71 0.32 -0.32
118 AT1G15310 signal recognition particle 54 kDa subunit signal recognition particle 54 kDa
subunit, SIGNAL RECOGNITION
PARTICLE 54 KDA SUBUNIT		 -0.71 0.31 -0.32
119 AT3G51430 Calcium-dependent phosphotriesterase superfamily protein STRICTOSIDINE SYNTHASE-LIKE 5,
YELLOW-LEAF-SPECIFIC GENE 2		 -0.71 0.33 -0.33
120 AT1G30270 CBL-interacting protein kinase 23 ATCIPK23, CBL-interacting protein
kinase 23, LOW-K+-SENSITIVE 1,
SOS2-like protein kinase 17,
SNF1-RELATED PROTEIN KINASE 3.23		 -0.7 0.32 -0.32
121 AT5G45380 solute:sodium symporters;urea transmembrane transporters ATDUR3, DEGRADATION OF UREA 3 -0.7 0.31 -0.3
122 AT2G22970 serine carboxypeptidase-like 11 serine carboxypeptidase-like 11 -0.69 0.32 -0.32
123 AT3G61990 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 O-MTase family 3 protein -0.69 0.33 -0.36
124 AT5G26600 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 -0.68 0.33 -0.31
125 AT2G16790 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.68 0.3 -0.31
126 AT5G38030 MATE efflux family protein -0.67 0.32 -0.31
127 AT4G34860 Plant neutral invertase family protein alkaline/neutral invertase B -0.67 0.32 -0.32
128 AT1G78780 pathogenesis-related family protein -0.67 0.31 -0.33
129 AT4G11350 Protein of unknown function (DUF604) -0.67 0.3 -0.31
130 AT3G03520 non-specific phospholipase C3 non-specific phospholipase C3 -0.67 0.31 -0.3
131 AT2G47810 nuclear factor Y, subunit B5 nuclear factor Y, subunit B5 -0.67 0.31 -0.31
132 AT1G23800 aldehyde dehydrogenase 2B7 aldehyde dehydrogenase 2B,
aldehyde dehydrogenase 2B7		 -0.66 0.3 -0.32
133 AT1G78960 lupeol synthase 2 lupeol synthase 2, lupeol synthase
2		 -0.66 0.31 -0.31
134 AT5G59320 lipid transfer protein 3 lipid transfer protein 3 -0.66 0.3 -0.31