AT4G24270 : EMBRYO DEFECTIVE 140
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G24270
Description EMBRYO DEFECTIVE 140
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G24270 EMBRYO DEFECTIVE 140 EMBRYO DEFECTIVE 140 1 0.3 -0.32
2 AT1G15420 CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12
(InterPro:IPR007148); Has 764 Blast hits to 656 proteins in
193 species: Archae - 0; Bacteria - 42; Metazoa - 237;
Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes -
223 (source: NCBI BLink).		 0.77 0.33 -0.31
3 AT5G16800 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.77 0.31 -0.31
4 AT3G26410 methyltransferases;nucleic acid binding AtTRM11, tRNA modification 11 0.76 0.31 -0.32
5 AT3G16310 mitotic phosphoprotein N' end (MPPN) family protein 0.75 0.31 -0.31
6 AT5G51130 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.73 0.31 -0.3
7 AT3G63400 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.72 0.3 -0.35
8 AT3G01790 Ribosomal protein L13 family protein 0.72 0.3 -0.32
9 AT2G03820 nonsense-mediated mRNA decay NMD3 family protein 0.72 0.31 -0.32
10 AT3G10420 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 SEEDLING PLASTID DEVELOPMENT 1 -0.71 0.32 -0.33
11 AT3G04610 RNA-binding KH domain-containing protein flowering locus KH domain 0.71 0.33 -0.3
12 AT3G15590 Tetratricopeptide repeat (TPR)-like superfamily protein 0.71 0.31 -0.31
13 AT3G23610 dual specificity protein phosphatase 1 dual specificity protein
phosphatase 1		 -0.71 0.31 -0.33
14 AT5G19680 Leucine-rich repeat (LRR) family protein 0.7 0.32 -0.31
15 AT1G79470 Aldolase-type TIM barrel family protein 0.7 0.32 -0.32
16 AT3G54980 Pentatricopeptide repeat (PPR) superfamily protein 0.69 0.3 -0.31
17 AT5G58660 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.69 0.29 -0.32
18 AT4G27435 Protein of unknown function (DUF1218) -0.68 0.32 -0.32
19 AT2G37310 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.29 -0.3
20 AT5G13850 nascent polypeptide-associated complex subunit alpha-like
protein 3		 nascent polypeptide-associated
complex subunit alpha-like protein
3		 0.68 0.31 -0.33
21 AT3G16280 Integrase-type DNA-binding superfamily protein -0.68 0.34 -0.32
22 AT5G25800 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.67 0.3 -0.32
23 AT5G07890 myosin heavy chain-related -0.67 0.31 -0.32
24 AT3G56690 Cam interacting protein 111 Cam interacting protein 111 0.67 0.31 -0.32
25 AT3G27925 DegP protease 1 DegP protease 1, DegP protease 1 -0.66 0.31 -0.33
26 AT1G68540 NAD(P)-binding Rossmann-fold superfamily protein cinnamoyl coA reductase-like 6,
tetraketide alpha-pyrone reductase
2		 -0.66 0.33 -0.32
27 AT5G27920 F-box family protein 0.66 0.32 -0.31
28 AT5G63530 farnesylated protein 3 ARABIDOPSIS THALIANA FARNESYLATED
PROTEIN 3, farnesylated protein 3		 -0.65 0.29 -0.3
29 AT3G58520 Ubiquitin carboxyl-terminal hydrolase family protein 0.65 0.31 -0.31
30 AT4G35130 Tetratricopeptide repeat (TPR)-like superfamily protein 0.65 0.31 -0.32
31 AT1G15170 MATE efflux family protein 0.65 0.3 -0.31
32 AT3G08620 RNA-binding KH domain-containing protein 0.64 0.33 -0.32
33 AT1G60620 RNA polymerase I subunit 43 RNA polymerase I subunit 43, RNA
polymerase I subunit 43		 0.64 0.3 -0.31
34 AT3G12570 FYD FYD 0.64 0.33 -0.33
35 AT5G25500 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.64 0.32 -0.32
36 AT3G54860 Sec1/munc18-like (SM) proteins superfamily ATVPS33, VACUOLAR PROTEIN SORTING
33		 -0.63 0.31 -0.32
37 AT4G13260 Flavin-binding monooxygenase family protein YUCCA2 -0.63 0.31 -0.33
38 AT1G03990 Long-chain fatty alcohol dehydrogenase family protein -0.63 0.33 -0.31
39 AT1G02120 GRAM domain family protein VASCULAR ASSOCIATED DEATH1 -0.62 0.31 -0.32
40 AT5G10310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.62 0.32 -0.32
41 AT5G52540 Protein of unknown function (DUF819) -0.62 0.32 -0.33
42 AT5G26190 Cysteine/Histidine-rich C1 domain family protein -0.62 0.33 -0.31
43 AT4G32270 Ubiquitin-like superfamily protein -0.62 0.31 -0.29
44 AT1G03270 CBS domain-containing protein with a domain of unknown
function (DUF21)		 -0.61 0.33 -0.29
45 AT2G29970 Double Clp-N motif-containing P-loop nucleoside
triphosphate hydrolases superfamily protein		 -0.61 0.35 -0.32
46 AT2G22310 ubiquitin-specific protease 4 ubiquitin-specific protease 4,
ubiquitin-specific protease 4		 -0.61 0.3 -0.31
47 AT1G78950 Terpenoid cyclases family protein -0.61 0.3 -0.31
48 AT5G35170 adenylate kinase family protein -0.6 0.32 -0.32
49 AT3G16700 Fumarylacetoacetate (FAA) hydrolase family -0.6 0.31 -0.31
50 AT3G20420 RNAse THREE-like protein 2 RNASEIII-LIKE 2, RNAse THREE-like
protein 2		 -0.6 0.3 -0.32
51 AT5G56160 Sec14p-like phosphatidylinositol transfer family protein -0.6 0.33 -0.3
52 AT5G66420 CONTAINS InterPro DOMAIN/s: Uncharacterised conserved
protein UCP033271 (InterPro:IPR008322), TIM-barrel signal
transduction protein, predicted (InterPro:IPR009215); Has
30201 Blast hits to 17322 proteins in 780 species: Archae -
12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.6 0.3 -0.31
53 AT4G21760 beta-glucosidase 47 beta-glucosidase 47 -0.6 0.3 -0.35
54 AT2G41120 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF309
(InterPro:IPR005500); Has 349 Blast hits to 349 proteins in
112 species: Archae - 2; Bacteria - 189; Metazoa - 0; Fungi
- 0; Plants - 31; Viruses - 0; Other Eukaryotes - 127
(source: NCBI BLink).		 -0.6 0.31 -0.3
55 AT1G79790 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 Arabidopsis thaliana chloroplast
FMN hydrolase 1, flavin
mononucleotide hydrolase 1		 -0.6 0.3 -0.33
56 AT4G30520 Leucine-rich repeat protein kinase family protein SENESCENCE-ASSOCIATED
RECEPTOR-LIKE KINASE		 -0.59 0.3 -0.33
57 AT1G67870 glycine-rich protein -0.59 0.31 -0.32
58 AT2G39690 Protein of unknown function, DUF547 -0.59 0.31 -0.3
59 AT4G24250 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 13,
MILDEW RESISTANCE LOCUS O 13		 -0.59 0.33 -0.33
60 AT3G24010 RING/FYVE/PHD zinc finger superfamily protein ARABIDOPSIS THALIANA INHIBITOR OF
GROWTH 1, INHIBITOR OF GROWTH 1		 -0.59 0.32 -0.31
61 AT2G47120 NAD(P)-binding Rossmann-fold superfamily protein -0.59 0.3 -0.3
62 AT1G11940 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.59 0.3 -0.3
63 AT1G29750 receptor-like kinase in flowers 1 receptor-like kinase in flowers 1 -0.59 0.32 -0.31
64 AT2G39435 Phosphatidylinositol N-acetyglucosaminlytransferase subunit
P-related		 -0.58 0.3 -0.32
65 AT2G32160 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.58 0.32 -0.3
66 AT1G17240 receptor like protein 2 receptor like protein 2, receptor
like protein 2		 -0.56 0.31 -0.3
67 AT2G46630 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; Has
110095 Blast hits to 59224 proteins in 2216 species: Archae
- 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843;
Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876
(source: NCBI BLink).		 -0.56 0.3 -0.31
68 AT2G24220 purine permease 5 purine permease 5, purine permease
5		 -0.56 0.33 -0.3
69 AT4G12990 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
plant-type cell wall; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 4 Blast hits to 4
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.56 0.32 -0.35
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
70 C0159 MST_1505.6 - - - -0.69 0.46 -0.41
71 C0162 MST_1588.3 - - - -0.68 0.43 -0.4
72 C0142 Malonic acid - Malonate fatty acid biosynthesis (plant mitochondria) -0.6 0.32 -0.32 C0142