AT4G24490 : RAB geranylgeranyl transferase alpha subunit 1.....
Query Information
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AGICode AT4G24490
Description RAB geranylgeranyl transferase alpha subunit 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G24490 RAB geranylgeranyl transferase alpha subunit 1 RAB geranylgeranyl transferase
alpha subunit 1, RAB
geranylgeranyl transferase alpha
subunit 1		 1 0.31 -0.31
2 AT3G30160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 14 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G35320.1); Has 9 Blast hits to 9 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.75 0.31 -0.32
3 AT3G08960 ARM repeat superfamily protein 0.69 0.33 -0.3
4 AT3G01630 Major facilitator superfamily protein 0.69 0.33 -0.33
5 AT1G23090 sulfate transporter 91 sulfate transporter 91, SULTR3;3 0.67 0.31 -0.3
6 AT1G31230 aspartate kinase-homoserine dehydrogenase i ASPARTATE KINASE-HOMOSERINE
DEHYDROGENASE, aspartate
kinase-homoserine dehydrogenase i		 0.66 0.32 -0.29
7 AT5G14640 shaggy-like kinase 13 SHAGGY-LIKE KINASE 13, shaggy-like
kinase 13		 -0.66 0.31 -0.32
8 AT4G27120 CONTAINS InterPro DOMAIN/s: DDRGK domain
(InterPro:IPR019153); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.66 0.31 -0.31
9 AT3G18215 Protein of unknown function, DUF599 0.66 0.33 -0.3
10 AT3G04605 transposable element gene 0.66 0.3 -0.33
11 AT3G62740 beta glucosidase 7 beta glucosidase 7 -0.64 0.32 -0.34
12 AT1G67370 DNA-binding HORMA family protein ASYNAPTIC 1, ATASY1 -0.63 0.31 -0.3
13 AT5G17140 Cysteine proteinases superfamily protein 0.63 0.3 -0.31
14 AT5G26630 MADS-box transcription factor family protein -0.63 0.3 -0.37
15 AT3G03340 LUC7 related protein unfertilized embryo sac 6 -0.62 0.32 -0.29
16 AT3G17430 Nucleotide-sugar transporter family protein 0.61 0.3 -0.3
17 AT5G48450 SKU5 similar 3 SKU5 similar 3 0.61 0.31 -0.31
18 AT2G28440 proline-rich family protein 0.6 0.31 -0.29
19 AT5G01280 BEST Arabidopsis thaliana protein match is: proline-rich
family protein (TAIR:AT3G09000.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.6 0.32 -0.34
20 AT4G00700 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 -0.6 0.31 -0.32
21 AT5G64080 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 AtXYP1, xylogen protein 1 -0.6 0.31 -0.34
22 AT3G09780 CRINKLY4 related 1 ATCRR1, CRINKLY4 related 1 0.6 0.3 -0.28
23 AT1G47940 Pentatricopeptide repeat (PPR) superfamily protein 0.59 0.33 -0.31
24 AT2G15680 Calcium-binding EF-hand family protein AtCML30, calmodulin-like 30 0.59 0.31 -0.33
25 AT5G36650 transposable element gene -0.59 0.33 -0.32
26 AT1G53380 Plant protein of unknown function (DUF641) 0.59 0.3 -0.35
27 AT5G04000 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.58 0.31 -0.32
28 AT1G79670 Wall-associated kinase family protein RESISTANCE TO FUSARIUM OXYSPORUM
1, WAKL22		 0.58 0.32 -0.3
29 AT5G05700 arginine-tRNA protein transferase 1 ATATE1, arginine-tRNA protein
transferase 1, DELAYED LEAF
SENESCENCE 1		 0.58 0.3 -0.32
30 AT1G57600 MBOAT (membrane bound O-acyl transferase) family protein 0.58 0.32 -0.31
31 AT2G23550 methyl esterase 6 ALPHA/BETA FOLD HYDROLASE/ESTERASE
1, METHYL ESTERASE 6, methyl
esterase 6		 0.58 0.33 -0.31
32 AT1G58390 Disease resistance protein (CC-NBS-LRR class) family -0.57 0.3 -0.3
33 AT1G50990 Protein kinase protein with tetratricopeptide repeat domain 0.57 0.32 -0.33
34 AT1G67480 Galactose oxidase/kelch repeat superfamily protein 0.57 0.29 -0.34
35 AT5G61550 U-box domain-containing protein kinase family protein 0.57 0.31 -0.33
36 AT1G11170 Protein of unknown function (DUF707) -0.57 0.31 -0.3
37 AT5G46795 microspore-specific promoter 2 microspore-specific promoter 2 -0.57 0.34 -0.31
38 AT3G60270 Cupredoxin superfamily protein 0.56 0.3 -0.32
39 AT3G52030 F-box family protein with WD40/YVTN repeat doamin -0.56 0.35 -0.32
40 AT5G19875 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G31940.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.56 0.3 -0.32
41 AT5G27200 acyl carrier protein 5 acyl carrier protein 5 0.56 0.33 -0.31
42 AT2G14095 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 7 plant structures; EXPRESSED
DURING: 4 anthesis, C globular stage, petal differentiation
and expansion stage; Has 106 Blast hits to 103 proteins in
21 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi -
4; Plants - 87; Viruses - 0; Other Eukaryotes - 10 (source:
NCBI BLink).		 -0.56 0.3 -0.31
43 AT3G24850 Domain of unknown function (DUF313) 0.55 0.31 -0.33
44 AT4G08090 transposable element gene 0.55 0.31 -0.34
45 AT2G40310 Pectin lyase-like superfamily protein -0.55 0.32 -0.32
46 AT1G71450 Integrase-type DNA-binding superfamily protein 0.55 0.31 -0.31
47 AT2G42640 Mitogen activated protein kinase kinase kinase-related -0.55 0.3 -0.32
48 AT1G35900 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.54 0.3 -0.34
49 AT3G56630 cytochrome P450, family 94, subfamily D, polypeptide 2 cytochrome P450, family 94,
subfamily D, polypeptide 2		 0.54 0.3 -0.3
50 AT4G38960 B-box type zinc finger family protein -0.54 0.31 -0.31
51 AT5G53480 ARM repeat superfamily protein 0.54 0.33 -0.28
52 AT3G46150 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.54 0.31 -0.32
53 AT5G42570 B-cell receptor-associated 31-like -0.53 0.32 -0.31
54 AT5G25070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.53 0.32 -0.32
55 AT1G60380 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 -0.53 0.33 -0.31
56 AT5G05710 Pleckstrin homology (PH) domain superfamily protein 0.53 0.33 -0.29
57 AT2G17620 Cyclin B2;1 Cyclin B2;1 -0.52 0.3 -0.32
58 AT1G05450 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.52 0.3 -0.29
59 AT4G28280 LORELEI-LIKE-GPI ANCHORED PROTEIN 3 LORELEI-LIKE-GPI ANCHORED PROTEIN
3		 -0.52 0.29 -0.32
60 AT1G64290 F-box protein-related -0.51 0.33 -0.33
61 AT5G17580 Phototropic-responsive NPH3 family protein -0.51 0.31 -0.29
62 AT5G51800 Protein kinase superfamily protein -0.5 0.31 -0.3
63 AT5G19360 calcium-dependent protein kinase 34 calcium-dependent protein kinase
34		 -0.5 0.29 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
64 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		-0.7 0.46 -0.45 C0107