AT4G24550 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G24550
Description Clathrin adaptor complexes medium subunit family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G24550 Clathrin adaptor complexes medium subunit family protein 1 0.33 -0.34
2 AT4G28600 no pollen germination related 2 no pollen germination related 2 0.83 0.31 -0.33
3 AT5G51570 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 0.8 0.3 -0.28
4 AT1G23780 F-box family protein 0.79 0.33 -0.31
5 AT5G19000 BTB-POZ and MATH domain 1 BTB-POZ AND MATH DOMAIN 1, BTB-POZ
and MATH domain 1		 0.79 0.32 -0.29
6 AT4G16440 ferredoxin hydrogenases 0.79 0.33 -0.32
7 AT1G80690 PPPDE putative thiol peptidase family protein -0.79 0.31 -0.29
8 AT5G58020 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF602 (InterPro:IPR006735); Has 385 Blast
hits to 385 proteins in 189 species: Archae - 0; Bacteria -
0; Metazoa - 153; Fungi - 117; Plants - 50; Viruses - 0;
Other Eukaryotes - 65 (source: NCBI BLink).		 0.78 0.32 -0.31
9 AT2G47970 Nuclear pore localisation protein NPL4 0.78 0.33 -0.3
10 AT3G03950 evolutionarily conserved C-terminal region 1 evolutionarily conserved
C-terminal region 1		 0.78 0.32 -0.32
11 AT1G51710 ubiquitin-specific protease 6 ATUBP6, ubiquitin-specific
protease 6		 0.77 0.33 -0.31
12 AT4G08170 Inositol 1,3,4-trisphosphate 5/6-kinase family protein 0.76 0.32 -0.32
13 AT1G69580 Homeodomain-like superfamily protein -0.76 0.34 -0.33
14 AT1G15130 Endosomal targeting BRO1-like domain-containing protein 0.76 0.31 -0.31
15 AT1G35670 calcium-dependent protein kinase 2 calcium-dependent protein kinase
2, ATCPK11, calcium-dependent
protein kinase 2, CPK11		 0.75 0.32 -0.3
16 AT1G66340 Signal transduction histidine kinase, hybrid-type, ethylene
sensor		 AtETR1, ETHYLENE INSENSITIVE 1,
ETHYLENE RESPONSE, ETHYLENE
RESPONSE 1		 0.75 0.32 -0.3
17 AT4G23850 AMP-dependent synthetase and ligase family protein long-chain acyl-CoA synthetase 4 0.75 0.31 -0.32
18 AT1G16070 tubby like protein 8 tubby like protein 8, tubby like
protein 8		 -0.75 0.31 -0.33
19 AT1G53570 mitogen-activated protein kinase kinase kinase 3 mitogen-activated protein kinase
kinase kinase 3, MAP KINASE KINASE
KINASE 3		 0.74 0.32 -0.32
20 AT5G54960 pyruvate decarboxylase-2 pyruvate decarboxylase-2 0.74 0.31 -0.3
21 AT3G47120 RNA recognition motif (RRM)-containing protein 0.73 0.32 -0.3
22 AT1G73730 ETHYLENE-INSENSITIVE3-like 3 AtEIL3, ARABIDOPSIS THALIANA
SULFUR LIMITATION 1,
ETHYLENE-INSENSITIVE3-like 3,
SULFUR LIMITATION 1		 0.73 0.32 -0.31
23 AT5G10780 CONTAINS InterPro DOMAIN/s: Uncharacterised conserved
protein UCP017207, transmembrane protein 85
(InterPro:IPR016687), Protein of unknown function DUF1077
(InterPro:IPR009445); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.73 0.35 -0.3
24 AT4G02570 cullin 1 cullin 1, AUXIN RESISTANT 6,
cullin 1		 0.73 0.35 -0.32
25 AT4G01320 Peptidase family M48 family protein ATSTE24, STE24 0.73 0.32 -0.32
26 AT5G64400 CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST
Arabidopsis thaliana protein match is: Cox19-like CHCH
family protein (TAIR:AT5G09570.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.72 0.32 -0.32
27 AT5G58620 zinc finger (CCCH-type) family protein 0.72 0.32 -0.33
28 AT5G13030 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0061
(InterPro:IPR003846); Has 5046 Blast hits to 4997 proteins
in 1211 species: Archae - 8; Bacteria - 2327; Metazoa -
120; Fungi - 134; Plants - 48; Viruses - 0; Other
Eukaryotes - 2409 (source: NCBI BLink).		 0.72 0.3 -0.3
29 AT4G23460 Adaptin family protein 0.72 0.31 -0.3
30 AT2G17980 Sec1/munc18-like (SM) proteins superfamily ATSLY1 0.72 0.31 -0.33
31 AT3G51550 Malectin/receptor-like protein kinase family protein FERONIA 0.72 0.33 -0.3
32 AT4G37120 Pre-mRNA splicing Prp18-interacting factor SWELLMAP 2 0.72 0.31 -0.32
33 AT1G01650 SIGNAL PEPTIDE PEPTIDASE-LIKE 4 ARABIDOPSIS THALIANA SIGNAL
PEPTIDE PEPTIDASE-LIKE 4, SIGNAL
PEPTIDE PEPTIDASE-LIKE 4		 0.72 0.31 -0.31
34 AT4G02290 glycosyl hydrolase 9B13 glycosyl hydrolase 9B13, glycosyl
hydrolase 9B13		 -0.72 0.33 -0.31
35 AT3G23890 topoisomerase II ATTOPII, topoisomerase II -0.72 0.33 -0.32
36 AT3G54030 Protein kinase protein with tetratricopeptide repeat domain 0.72 0.33 -0.32
37 AT3G58975 pseudogene of F-box family protein -0.71 0.32 -0.33
38 AT3G20630 ubiquitin-specific protease 14 ATUBP14, phosphate deficiency root
hair defective1, TITAN6,
ubiquitin-specific protease 14		 0.71 0.31 -0.31
39 AT3G53190 Pectin lyase-like superfamily protein -0.71 0.32 -0.32
40 AT2G03760 sulphotransferase 12 AtSOT1, sulphotransferase 12,
ARABIDOPSIS THALIANA
SULFOTRANSFERASE 1, RAR047,
sulphotransferase 12, ST,
SULFOTRANSFERASE 1		 0.71 0.32 -0.34
41 AT5G67420 LOB domain-containing protein 37 ASYMMETRIC LEAVES2-LIKE 39, LOB
domain-containing protein 37		 -0.71 0.32 -0.33
42 AT3G51720 Plant protein of unknown function (DUF827) -0.71 0.31 -0.31
43 AT4G12230 alpha/beta-Hydrolases superfamily protein 0.71 0.31 -0.34
44 AT1G01500 Erythronate-4-phosphate dehydrogenase family protein 0.71 0.34 -0.3
45 AT2G36530 Enolase ENOLASE 2, LOW EXPRESSION OF
OSMOTICALLY RESPONSIVE GENES 2		 0.71 0.3 -0.32
46 AT4G29080 phytochrome-associated protein 2 indole-3-acetic acid inducible 27,
phytochrome-associated protein 2		 -0.71 0.31 -0.29
47 AT4G17310 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9
plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT5G47455.7); Has 164 Blast hits to 164
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.71 0.3 -0.33
48 AT5G12010 unknown protein; INVOLVED IN: response to salt stress;
LOCATED IN: chloroplast, plasma membrane, membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G29780.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.71 0.32 -0.34
49 AT1G55840 Sec14p-like phosphatidylinositol transfer family protein 0.7 0.32 -0.33
50 AT2G19930 RNA-dependent RNA polymerase family protein -0.7 0.33 -0.32
51 AT5G10950 Tudor/PWWP/MBT superfamily protein 0.7 0.33 -0.29
52 AT3G58570 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.7 0.31 -0.33
53 AT4G14580 CBL-interacting protein kinase 4 CBL-interacting protein kinase 4,
SNF1-RELATED PROTEIN KINASE 3.3		 0.7 0.32 -0.32
54 AT3G43520 Transmembrane proteins 14C 0.7 0.33 -0.32
55 AT5G09590 mitochondrial HSO70 2 HEAT SHOCK COGNATE, mitochondrial
HSO70 2		 0.7 0.3 -0.31
56 AT5G13030 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0061
(InterPro:IPR003846); Has 5046 Blast hits to 4997 proteins
in 1211 species: Archae - 8; Bacteria - 2327; Metazoa -
120; Fungi - 134; Plants - 48; Viruses - 0; Other
Eukaryotes - 2409 (source: NCBI BLink).		 0.7 0.34 -0.33
57 AT1G10940 Protein kinase superfamily protein ARABIDOPSIS SERINE/THREONINE
KINASE 1, SUCROSE NONFERMENTING
1-RELATED PROTEIN KINASE 2-4,
SNF1-related protein kinase 2.4,
SRK2A		 0.7 0.3 -0.31
58 AT1G12730 GPI transamidase subunit PIG-U -0.69 0.3 -0.32
59 AT4G19865 Galactose oxidase/kelch repeat superfamily protein -0.68 0.3 -0.32
60 AT2G37790 NAD(P)-linked oxidoreductase superfamily protein Aldo-keto reductase family 4
member C10		 -0.68 0.3 -0.3
61 AT3G07540 Actin-binding FH2 (formin homology 2) family protein -0.68 0.32 -0.3
62 AT1G72030 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.68 0.33 -0.32
63 AT5G42780 homeobox protein 27 homeobox protein 27, homeobox
protein 27, ZINC FINGER
HOMEODOMAIN 13		 -0.67 0.31 -0.33
64 AT3G23930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: hypocotyl; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G13540.1); Has 10639 Blast hits to 7432 proteins
in 646 species: Archae - 82; Bacteria - 826; Metazoa -
5047; Fungi - 759; Plants - 314; Viruses - 86; Other
Eukaryotes - 3525 (source: NCBI BLink).		 -0.66 0.29 -0.32
65 AT3G54720 Peptidase M28 family protein ALTERED MERISTEM PROGRAM 1,
CONSTITUTIVE MORPHOGENESIS 2,
HAUPTLING, Multifolia, PRIMORDIA
TIMING		 -0.66 0.32 -0.32
66 AT5G11780 unknown protein; Has 37 Blast hits to 37 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.3 -0.34
67 AT1G30515 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 16 plant structures;
EXPRESSED DURING: 6 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G21740.1); Has 20 Blast hits to 20 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.31 -0.32
68 AT5G60930 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.65 0.32 -0.3
69 AT2G44830 Protein kinase superfamily protein -0.65 0.33 -0.3
70 AT2G38970 Zinc finger (C3HC4-type RING finger) family protein -0.65 0.35 -0.31
71 AT1G03620 ELMO/CED-12 family protein -0.65 0.32 -0.31
72 AT1G28110 serine carboxypeptidase-like 45 serine carboxypeptidase-like 45 -0.65 0.32 -0.32
73 AT2G24762 glutamine dumper 4 glutamine dumper 4, glutamine
dumper 4		 -0.64 0.32 -0.31
74 AT2G29660 zinc finger (C2H2 type) family protein -0.63 0.31 -0.31
75 AT2G35075 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.63 0.28 -0.31
76 AT3G18710 plant U-box 29 ARABIDOPSIS THALIANA PLANT U-BOX
29, plant U-box 29		 -0.62 0.33 -0.31
77 AT4G39570 Galactose oxidase/kelch repeat superfamily protein -0.62 0.33 -0.33
78 AT1G14480 Ankyrin repeat family protein -0.62 0.3 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
79 C0003 α-Tocopherol - alpha-Tocopherol vitamin E biosynthesis -0.76 0.46 -0.44 C0003
80 C0176 MST_2406.9 - - - -0.68 0.44 -0.47