AT4G24200 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G24200
Description Transcription elongation factor (TFIIS) family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G24200 Transcription elongation factor (TFIIS) family protein 1 0.32 -0.33
2 AT5G47400 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.77 0.31 -0.31
3 AT3G49240 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1796 0.76 0.32 -0.3
4 AT1G01160 GRF1-interacting factor 2 GRF1-interacting factor 2 -0.72 0.31 -0.33
5 AT1G53035 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G15358.1); Has 49 Blast hits to 49 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.7 0.31 -0.32
6 AT1G26370 RNA helicase family protein 0.69 0.3 -0.33
7 AT5G11730 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.69 0.35 -0.33
8 AT5G51280 DEAD-box protein abstrakt, putative 0.69 0.29 -0.31
9 AT3G11020 DRE/CRT-binding protein 2B DEHYDRATION-RESPONSIVE ELEMENT
BINDING PROTEIN 2, DRE/CRT-binding
protein 2B		 0.68 0.31 -0.32
10 AT5G47420 Tryptophan RNA-binding attenuator protein-like -0.68 0.32 -0.32
11 AT1G08410 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.68 0.31 -0.32
12 AT1G60890 Phosphatidylinositol-4-phosphate 5-kinase family protein 0.68 0.31 -0.31
13 AT5G64730 Transducin/WD40 repeat-like superfamily protein 0.67 0.34 -0.32
14 AT3G44530 homolog of histone chaperone HIRA homolog of histone chaperone HIRA 0.67 0.3 -0.34
15 AT1G33390 RNA helicase family protein FASCIATED STEM 4, FASCIATED STEM 4 0.67 0.31 -0.29
16 AT1G48120 hydrolases;protein serine/threonine phosphatases 0.66 0.34 -0.31
17 AT3G22670 Pentatricopeptide repeat (PPR) superfamily protein 0.66 0.32 -0.3
18 AT1G30290 Tetratricopeptide repeat (TPR)-like superfamily protein 0.64 0.33 -0.3
19 AT1G36990 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in
339 species: Archae - 2; Bacteria - 1372; Metazoa - 990;
Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes -
1593 (source: NCBI BLink).		 0.64 0.32 -0.31
20 AT1G27900 RNA helicase family protein 0.64 0.33 -0.31
21 AT3G61430 plasma membrane intrinsic protein 1A ARABIDOPSIS THALIANA PLASMA
MEMBRANE INTRINSIC PROTEIN 1,
PLASMA MEMBRANE INTRINSIC PROTEIN
1, PLASMA MEMBRANE INTRINSIC
PROTEIN 1;1, plasma membrane
intrinsic protein 1A		 -0.63 0.31 -0.29
22 AT4G19045 Mob1/phocein family protein -0.63 0.29 -0.33
23 AT1G49480 related to vernalization1 1 related to vernalization1 1 -0.63 0.31 -0.32
24 AT1G05910 cell division cycle protein 48-related / CDC48-related 0.63 0.35 -0.31
25 AT3G58050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G41960.1); Has 13384 Blast
hits to 8116 proteins in 546 species: Archae - 41; Bacteria
- 766; Metazoa - 5596; Fungi - 1431; Plants - 589; Viruses
- 46; Other Eukaryotes - 4915 (source: NCBI BLink).		 0.63 0.3 -0.35
26 AT2G17530 Protein kinase superfamily protein -0.62 0.32 -0.31
27 AT3G54480 SKP1/ASK-interacting protein 5 SKP1/ASK-interacting protein 5,
SKP5		 -0.62 0.33 -0.3
28 AT2G18620 Terpenoid synthases superfamily protein -0.62 0.32 -0.33
29 AT5G65120 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G10110.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.62 0.3 -0.31
30 AT1G25320 Leucine-rich repeat protein kinase family protein 0.62 0.28 -0.33
31 AT4G02710 Kinase interacting (KIP1-like) family protein 0.62 0.34 -0.31
32 AT5G46030 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF701, zinc-binding putative
(InterPro:IPR007808); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.61 0.31 -0.33
33 AT2G39940 RNI-like superfamily protein CORONATINE INSENSITIVE 1 0.61 0.3 -0.32
34 AT1G27690 Protein of unknown function (DUF620) -0.61 0.31 -0.31
35 AT3G53440 Homeodomain-like superfamily protein 0.61 0.34 -0.33
36 AT5G48810 cytochrome B5 isoform D ATB5-B, ARABIDOPSIS CYTOCHROME B5
ISOFORM D, B5 #3, cytochrome B5
isoform D		 -0.6 0.31 -0.32
37 AT1G49740 PLC-like phosphodiesterases superfamily protein -0.6 0.33 -0.33
38 AT5G61440 atypical CYS HIS rich thioredoxin 5 atypical CYS HIS rich thioredoxin
5		 -0.6 0.33 -0.31
39 AT2G38180 SGNH hydrolase-type esterase superfamily protein 0.6 0.28 -0.3
40 AT1G15400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast
hits to 82 proteins in 16 species: Archae - 0; Bacteria -
4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 -0.6 0.31 -0.31
41 AT5G13970 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G13310.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.6 0.32 -0.32
42 AT5G08550 GC-rich sequence DNA-binding factor-like protein increased level of polyploidy1-1D 0.6 0.32 -0.33
43 AT3G66652 fip1 motif-containing protein 0.6 0.31 -0.32
44 AT1G65000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G38060.1); Has 49 Blast hits
to 49 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.3 -0.3
45 AT1G60440 pantothenate kinase 1 ATCOAA, pantothenate kinase 1,
pantothenate kinase 1		 -0.6 0.32 -0.32
46 AT3G21350 RNA polymerase transcriptional regulation mediator-related MED6 -0.59 0.31 -0.33
47 AT3G23900 RNA recognition motif (RRM)-containing protein 0.59 0.33 -0.31
48 AT3G05130 BEST Arabidopsis thaliana protein match is: Prefoldin
chaperone subunit family protein (TAIR:AT5G27330.1); Has
171032 Blast hits to 82560 proteins in 3364 species: Archae
- 2835; Bacteria - 33550; Metazoa - 71995; Fungi - 13365;
Plants - 9598; Viruses - 592; Other Eukaryotes - 39097
(source: NCBI BLink).		 0.59 0.32 -0.32
49 AT5G56240 BEST Arabidopsis thaliana protein match is: hapless 8
(TAIR:AT5G56250.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 0.59 0.35 -0.29
50 AT5G67150 HXXXD-type acyl-transferase family protein -0.59 0.32 -0.3
51 AT5G45400 Replication factor-A protein 1-related ATRPA70C, RPA70C 0.59 0.31 -0.34
52 AT2G13600 Pentatricopeptide repeat (PPR) superfamily protein 0.59 0.3 -0.33
53 AT5G09740 histone acetyltransferase of the MYST family 2 histone acetyltransferase of the
MYST family 2		 -0.59 0.31 -0.3
54 AT5G60030 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G75335.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.59 0.28 -0.32
55 AT3G52360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G35850.1); Has 34 Blast
hits to 34 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.33 -0.31
56 AT3G11530 Vacuolar protein sorting 55 (VPS55) family protein -0.58 0.33 -0.31
57 AT3G55960 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.58 0.31 -0.32
58 AT5G05800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.58 0.34 -0.31
59 ATMG00680 hypothetical protein ORF122C -0.58 0.3 -0.3
60 AT3G18295 Protein of unknown function (DUF1639) -0.58 0.33 -0.31
61 AT3G02700 NC domain-containing protein-related -0.57 0.3 -0.3
62 AT5G26210 alfin-like 4 alfin-like 4 -0.57 0.32 -0.33
63 AT4G00880 SAUR-like auxin-responsive protein family -0.57 0.31 -0.32
64 AT5G03440 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G54880.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.57 0.31 -0.32
65 AT5G24540 beta glucosidase 31 beta glucosidase 31 -0.57 0.3 -0.32
66 AT5G18670 beta-amylase 3 BETA-AMYLASE 9, beta-amylase 3 -0.56 0.29 -0.3
67 AT3G52900 Family of unknown function (DUF662) -0.56 0.34 -0.31
68 AT2G18470 roline-rich extensin-like receptor kinase 4 proline-rich extensin-like
receptor kinase 4, proline-rich
extensin-like receptor kinase 4		 -0.56 0.33 -0.32
69 AT4G15250 B-box type zinc finger protein with CCT domain -0.56 0.33 -0.29
70 AT4G33460 ABC transporter family protein ATP-binding cassette I10, ATNAP13,
embryo defective 2751		 -0.55 0.31 -0.31
71 AT5G05250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G56360.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.55 0.33 -0.31
72 AT5G11300 mitotic-like cyclin 3B from Arabidopsis CYC2BAT, mitotic-like cyclin 3B
from Arabidopsis, CYCLIN A2;2		 -0.55 0.29 -0.33
73 AT3G20090 cytochrome P450, family 705, subfamily A, polypeptide 18 cytochrome P450, family 705,
subfamily A, polypeptide 18		 -0.55 0.32 -0.31
74 AT1G33475 SNARE-like superfamily protein -0.55 0.32 -0.32
75 AT3G27470 Protein of unknown function (DUF707) -0.54 0.3 -0.34
76 AT5G41080 PLC-like phosphodiesterases superfamily protein AtGDPD2, glycerophosphodiester
phosphodiesterase 2		 -0.54 0.31 -0.3
77 AT4G33740 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G37820.1); Has 138210 Blast
hits to 73191 proteins in 2959 species: Archae - 732;
Bacteria - 18006; Metazoa - 48521; Fungi - 16820; Plants -
7078; Viruses - 1046; Other Eukaryotes - 46007 (source:
NCBI BLink).		 -0.54 0.34 -0.31
78 AT1G03457 RNA-binding (RRM/RBD/RNP motifs) family protein -0.53 0.3 -0.31
79 AT4G36960 RNA-binding (RRM/RBD/RNP motifs) family protein -0.53 0.32 -0.31
80 AT1G19770 purine permease 14 purine permease 14, purine
permease 14		 -0.53 0.32 -0.32