AGICode | AT4G24040 |
Description | trehalase 1 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G24040 | trehalase 1 | ATTRE1, trehalase 1 | 1 | 0.31 | -0.31 | ||
2 | AT2G16700 | actin depolymerizing factor 5 | actin depolymerizing factor 5, ATADF5 |
0.8 | 0.31 | -0.31 | ||
3 | AT3G20410 | calmodulin-domain protein kinase 9 | calmodulin-domain protein kinase 9 | 0.78 | 0.31 | -0.32 | ||
4 | AT5G20320 | dicer-like 4 | DICER-LIKE 4, dicer-like 4 | -0.76 | 0.32 | -0.34 | ||
5 | AT3G50240 | ATP binding microtubule motor family protein | KICP-02 | -0.75 | 0.33 | -0.29 | ||
6 | AT4G31310 | AIG2-like (avirulence induced gene) family protein | -0.75 | 0.32 | -0.31 | |||
7 | AT2G16710 | Iron-sulphur cluster biosynthesis family protein | 0.75 | 0.32 | -0.32 | |||
8 | AT4G18010 | myo-inositol polyphosphate 5-phosphatase 2 | myo-inositol polyphosphate 5-phosphatase 2, myo-inositol polyphosphate 5-phosphatase 2, INOSITOL(1,4,5)P3 5-PHOSPHATASE II |
0.74 | 0.32 | -0.32 | ||
9 | AT5G12010 | unknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.74 | 0.31 | -0.31 | |||
10 | AT2G39660 | botrytis-induced kinase1 | botrytis-induced kinase1 | 0.73 | 0.33 | -0.33 | ||
11 | AT3G23890 | topoisomerase II | ATTOPII, topoisomerase II | -0.73 | 0.33 | -0.32 | ||
12 | AT2G45210 | SAUR-like auxin-responsive protein family | 0.72 | 0.31 | -0.31 | |||
13 | AT4G31670 | ubiquitin-specific protease 18 | ubiquitin-specific protease 18 | 0.72 | 0.32 | -0.29 | ||
14 | AT5G47820 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
FRAGILE FIBER 1 | -0.72 | 0.32 | -0.32 | ||
15 | AT5G49555 | FAD/NAD(P)-binding oxidoreductase family protein | -0.72 | 0.31 | -0.32 | |||
16 | AT5G50740 | Heavy metal transport/detoxification superfamily protein | -0.72 | 0.32 | -0.32 | |||
17 | AT3G61080 | Protein kinase superfamily protein | -0.71 | 0.31 | -0.33 | |||
18 | AT1G54350 | ABC transporter family protein | ATP-binding cassette D2 | -0.71 | 0.32 | -0.3 | ||
19 | AT1G03055 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 143 Blast hits to 143 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). |
-0.7 | 0.3 | -0.31 | |||
20 | AT3G04070 | NAC domain containing protein 47 | NAC domain containing protein 47, NAC domain containing protein 47 |
0.7 | 0.31 | -0.32 | ||
21 | AT3G51150 | ATP binding microtubule motor family protein | -0.7 | 0.3 | -0.31 | |||
22 | AT2G28120 | Major facilitator superfamily protein | 0.7 | 0.34 | -0.32 | |||
23 | AT5G60930 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.7 | 0.33 | -0.33 | |||
24 | AT2G02220 | phytosulfokin receptor 1 | PHYTOSULFOKIN RECEPTOR 1, phytosulfokin receptor 1 |
0.7 | 0.31 | -0.31 | ||
25 | AT5G13290 | Protein kinase superfamily protein | CORYNE, SUPPRESSOR OF LLP1 2 | -0.7 | 0.31 | -0.32 | ||
26 | AT3G51720 | Plant protein of unknown function (DUF827) | -0.7 | 0.32 | -0.3 | |||
27 | AT4G38660 | Pathogenesis-related thaumatin superfamily protein | -0.69 | 0.34 | -0.29 | |||
28 | AT3G55630 | DHFS-FPGS homolog D | DHFS-FPGS homolog D, DHFS-FPGS homolog D, folylpolyglutamate synthetase 3 |
-0.69 | 0.32 | -0.3 | ||
29 | AT5G46050 | peptide transporter 3 | ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 3, peptide transporter 3 |
0.69 | 0.32 | -0.32 | ||
30 | AT5G02370 | ATP binding microtubule motor family protein | -0.69 | 0.31 | -0.32 | |||
31 | AT1G14460 | AAA-type ATPase family protein | -0.69 | 0.31 | -0.31 | |||
32 | AT2G39470 | PsbP-like protein 2 | Photosynthetic NDH subcomplex L 1, PsbP-like protein 2 |
-0.69 | 0.33 | -0.36 | ||
33 | AT4G16440 | ferredoxin hydrogenases | 0.68 | 0.31 | -0.33 | |||
34 | AT4G30400 | RING/U-box superfamily protein | -0.68 | 0.32 | -0.31 | |||
35 | AT1G56500 | haloacid dehalogenase-like hydrolase family protein | -0.68 | 0.31 | -0.3 | |||
36 | AT3G02240 | Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). |
root meristem growth factor 7 | 0.68 | 0.32 | -0.32 | ||
37 | AT1G68190 | B-box zinc finger family protein | -0.67 | 0.33 | -0.32 | |||
38 | AT3G04010 | O-Glycosyl hydrolases family 17 protein | 0.67 | 0.31 | -0.32 | |||
39 | AT4G22470 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein |
0.67 | 0.3 | -0.31 | |||
40 | AT4G02330 | Plant invertase/pectin methylesterase inhibitor superfamily | AtPME41, ATPMEPCRB, pectin methylesterase 41 |
0.66 | 0.3 | -0.33 | ||
41 | AT3G48420 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
-0.66 | 0.33 | -0.32 | |||
42 | AT3G26932 | dsRNA-binding protein 3 | dsRNA-binding protein 3 | -0.66 | 0.32 | -0.3 | ||
43 | AT5G55820 | CONTAINS InterPro DOMAIN/s: Inner centromere protein, ARK-binding region (InterPro:IPR005635); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
WYRD | -0.66 | 0.31 | -0.33 | ||
44 | AT4G10420 | FBD / Leucine Rich Repeat domains containing protein | -0.66 | 0.3 | -0.32 | |||
45 | AT3G56170 | Ca-2+ dependent nuclease | Ca-2+ dependent nuclease | 0.66 | 0.31 | -0.31 | ||
46 | AT1G61450 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G61415.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.66 | 0.33 | -0.33 | |||
47 | AT1G28520 | vascular plant one zinc finger protein | VASCULAR PLANT ONE ZINC FINGER PROTEIN, vascular plant one zinc finger protein |
0.66 | 0.31 | -0.3 | ||
48 | AT2G21370 | xylulose kinase-1 | xylulose kinase-1, XYLULOSE KINASE 1 |
-0.66 | 0.31 | -0.3 | ||
49 | AT2G36320 | A20/AN1-like zinc finger family protein | 0.65 | 0.31 | -0.33 | |||
50 | AT3G20150 | Kinesin motor family protein | -0.65 | 0.31 | -0.32 | |||
51 | AT5G62910 | RING/U-box superfamily protein | 0.65 | 0.31 | -0.31 | |||
52 | AT4G26520 | Aldolase superfamily protein | -0.65 | 0.31 | -0.33 | |||
53 | AT5G24930 | CONSTANS-like 4 | ATCOL4, CONSTANS-like 4 | -0.65 | 0.3 | -0.31 | ||
54 | AT1G32080 | membrane protein, putative | AtLrgB, LrgB | -0.65 | 0.3 | -0.32 | ||
55 | AT5G35170 | adenylate kinase family protein | -0.64 | 0.32 | -0.34 | |||
56 | AT2G15020 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64190.1); Has 72 Blast hits to 72 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.64 | 0.3 | -0.33 | |||
57 | AT4G11080 | HMG (high mobility group) box protein | 3xHigh Mobility Group-box1 | -0.64 | 0.32 | -0.3 | ||
58 | AT4G13100 | RING/U-box superfamily protein | -0.64 | 0.31 | -0.33 | |||
59 | AT5G20660 | Zn-dependent exopeptidases superfamily protein | 0.64 | 0.31 | -0.34 | |||
60 | AT1G77810 | Galactosyltransferase family protein | 0.64 | 0.32 | -0.33 | |||
61 | AT1G51110 | Plastid-lipid associated protein PAP / fibrillin family protein |
-0.64 | 0.31 | -0.31 | |||
62 | AT1G64040 | type one serine/threonine protein phosphatase 3 | type one serine/threonine protein phosphatase 3 |
0.63 | 0.31 | -0.32 | ||
63 | AT4G32650 | potassium channel in Arabidopsis thaliana 3 | ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1, A. thaliana low-K+-tolerant 1, potassium channel in Arabidopsis thaliana 3, KC1 |
0.63 | 0.3 | -0.3 | ||
64 | AT1G62790 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.63 | 0.31 | -0.32 | |||
65 | AT4G03205 | Coproporphyrinogen III oxidase | hemf2 | -0.63 | 0.31 | -0.29 | ||
66 | AT5G13770 | Pentatricopeptide repeat (PPR-like) superfamily protein | -0.63 | 0.32 | -0.32 | |||
67 | AT1G32220 | NAD(P)-binding Rossmann-fold superfamily protein | -0.63 | 0.32 | -0.31 | |||
68 | AT2G39210 | Major facilitator superfamily protein | 0.63 | 0.34 | -0.34 | |||
69 | AT2G02780 | Leucine-rich repeat protein kinase family protein | -0.62 | 0.32 | -0.29 | |||
70 | AT1G11160 | Transducin/WD40 repeat-like superfamily protein | -0.62 | 0.32 | -0.31 | |||
71 | AT2G44830 | Protein kinase superfamily protein | -0.62 | 0.31 | -0.32 | |||
72 | AT3G22425 | imidazoleglycerol-phosphate dehydratase | HISN5A, imidazoleglycerol-phosphate dehydratase |
-0.62 | 0.32 | -0.31 | ||
73 | AT1G10070 | branched-chain amino acid transaminase 2 | branched-chain amino acid transaminase 2, branched-chain amino acid transaminase 2 |
0.62 | 0.33 | -0.32 | ||
74 | AT4G28706 | pfkB-like carbohydrate kinase family protein | -0.62 | 0.31 | -0.32 | |||
75 | AT3G06240 | F-box family protein | 0.61 | 0.3 | -0.31 | |||
76 | AT3G54420 | homolog of carrot EP3-3 chitinase | CHITINASE CLASS IV, homolog of carrot EP3-3 chitinase, CHIV, homolog of carrot EP3-3 chitinase |
0.61 | 0.32 | -0.32 | ||
77 | AT5G44290 | Protein kinase superfamily protein | 0.61 | 0.3 | -0.31 | |||
78 | AT5G11020 | Protein kinase superfamily protein | -0.61 | 0.31 | -0.32 | |||
79 | AT2G37080 | ROP interactive partner 3 | ROP interactive partner 3 | -0.61 | 0.32 | -0.32 | ||
80 | AT4G02730 | Transducin/WD40 repeat-like superfamily protein | AtWDR5b, human WDR5 (WD40 repeat) homolog b |
0.61 | 0.32 | -0.33 | ||
81 | AT1G74530 | unknown protein; Has 49 Blast hits to 49 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.61 | 0.31 | -0.32 | |||
82 | AT3G01980 | NAD(P)-binding Rossmann-fold superfamily protein | -0.61 | 0.31 | -0.33 | |||
83 | AT1G61240 | Protein of unknown function (DUF707) | -0.61 | 0.31 | -0.33 | |||
84 | AT1G24290 | AAA-type ATPase family protein | -0.61 | 0.32 | -0.33 | |||
85 | AT2G32860 | beta glucosidase 33 | beta glucosidase 33 | -0.61 | 0.33 | -0.34 | ||
86 | AT1G71040 | Cupredoxin superfamily protein | Low Phosphate Root2 | 0.6 | 0.33 | -0.3 | ||
87 | AT2G16660 | Major facilitator superfamily protein | 0.6 | 0.32 | -0.32 | |||
88 | AT4G02380 | senescence-associated gene 21 | Arabidopsis thaliana late embryogenensis abundant like 5, senescence-associated gene 21 |
0.6 | 0.33 | -0.31 | ||
89 | AT2G36080 | AP2/B3-like transcriptional factor family protein | 0.6 | 0.31 | -0.29 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
90 | C0063 | Campesterol | - | Campesterol | brassinosteroid biosynthesis I, brassinosteroid biosynthesis II, plant sterol biosynthesis, brassinosteroid biosynthesis III |
-0.81 | 0.43 | -0.48 | ||
91 | C0253 | Threonic acid-1,4-lactone | D,L-Threonic acid-1,4-lactone | - | - | -0.78 | 0.46 | -0.43 | ||
92 | C0016 | S-Adenosylmethionine | S-Adenosyl-L-methionine | S-Adenosyl-L-methionine | ethylene biosynthesis I (plants), scopoletin biosynthesis, quercetinsulphates biosynthesis, siroheme biosynthesis, gibberellin inactivation II (methylation), suberin biosynthesis, volatile benzenoid biosynthesis I (ester formation), S-adenosyl-L-methionine cycle II, methylhalides biosynthesis (plants), S-methylmethionine cycle, ubiquinol-9 biosynthesis (eukaryotic), nicotianamine biosynthesis, methionine biosynthesis II, spermine biosynthesis, choline biosynthesis II, diphthamide biosynthesis, homogalacturonan biosynthesis, phosphatidylcholine biosynthesis II, methylquercetin biosynthesis, plastoquinol biosynthesis, chlorophyllide a biosynthesis I, ferulate and sinapate biosynthesis, ubiquinol-10 biosynthesis (eukaryotic), phenylpropanoid biosynthesis, free phenylpropanoid acid biosynthesis, seleno-amino acid detoxification and volatilization I, plant sterol biosynthesis, lipoate biosynthesis and incorporation I, methyl indole-3-acetate interconversion, cyclopropane and cyclopropene fatty acid biosynthesis, spermidine biosynthesis I, thiamine biosynthesis II, methionine salvage pathway, spermidine hydroxycinnamic acid conjugates biosynthesis, simple coumarins biosynthesis, phosphatidylcholine biosynthesis IV, glutathione-mediated detoxification II, S-adenosyl-L-methionine biosynthesis, methionine degradation I (to homocysteine), phosphatidylcholine biosynthesis III, phylloquinol biosynthesis, choline biosynthesis I, biotin biosynthesis II, vitamin E biosynthesis |
-0.77 | 0.45 | -0.44 | ||
93 | C0019 | 1-O-β-Glucopyranosylsinapic acid | 1-O-β-D-Glucopyranosylsinapic acid | - | phenylpropanoid pathwayl, lignin biosynthesis |
-0.71 | 0.46 | -0.44 | ||
94 | C0059 | Arginine amide | - | - | - | -0.67 | 0.46 | -0.45 | ||
95 | C0212 | PR_MST_2336.8 | - | - | - | -0.62 | 0.46 | -0.43 |