AT4G23040 : -
Query Information
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AGICode AT4G23040
Description Ubiquitin-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G23040 Ubiquitin-like superfamily protein 1 0.32 -0.31
2 AT1G33230 TMPIT-like protein 0.82 0.32 -0.3
3 AT2G47970 Nuclear pore localisation protein NPL4 0.79 0.33 -0.31
4 AT3G43510 transposable element gene 0.78 0.31 -0.32
5 AT4G01320 Peptidase family M48 family protein ATSTE24, STE24 0.77 0.33 -0.31
6 AT3G09350 Fes1A Fes1A 0.77 0.3 -0.29
7 AT4G21110 G10 family protein 0.77 0.32 -0.32
8 AT3G01150 polypyrimidine tract-binding protein 1 POLYPYRIMIDINE TRACT-BINDING
PROTEIN 1, polypyrimidine
tract-binding protein 1		 0.76 0.34 -0.3
9 AT1G43860 sequence-specific DNA binding transcription factors 0.75 0.33 -0.32
10 AT5G15640 Mitochondrial substrate carrier family protein 0.75 0.3 -0.33
11 AT1G10970 zinc transporter 4 precursor ATZIP4, zinc transporter 4
precursor		 -0.75 0.32 -0.3
12 AT2G24762 glutamine dumper 4 glutamine dumper 4, glutamine
dumper 4		 -0.75 0.31 -0.31
13 AT5G20570 RING-box 1 RING-BOX 1, HRT1, RING-box 1,
REGULATOR OF CULLINS-1		 0.75 0.31 -0.31
14 AT3G19630 Radical SAM superfamily protein 0.74 0.3 -0.31
15 AT5G10950 Tudor/PWWP/MBT superfamily protein 0.74 0.31 -0.35
16 AT4G28600 no pollen germination related 2 no pollen germination related 2 0.74 0.32 -0.32
17 AT1G31280 Argonaute family protein argonaute 2 0.74 0.32 -0.32
18 AT2G30260 U2 small nuclear ribonucleoprotein B U2 small nuclear ribonucleoprotein
B		 0.74 0.33 -0.32
19 AT4G30993 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.74 0.32 -0.34
20 AT5G58020 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF602 (InterPro:IPR006735); Has 385 Blast
hits to 385 proteins in 189 species: Archae - 0; Bacteria -
0; Metazoa - 153; Fungi - 117; Plants - 50; Viruses - 0;
Other Eukaryotes - 65 (source: NCBI BLink).		 0.74 0.32 -0.34
21 AT3G09410 Pectinacetylesterase family protein -0.74 0.31 -0.33
22 AT4G38890 FMN-linked oxidoreductases superfamily protein 0.74 0.32 -0.29
23 AT5G62640 proline-rich family protein AtELF5, EARLY FLOWERING 5 0.74 0.33 -0.31
24 AT3G12130 KH domain-containing protein / zinc finger (CCCH type)
family protein		 0.74 0.32 -0.29
25 AT3G19980 flower-specific, phytochrome-associated protein phosphatase
3		 flower-specific,
phytochrome-associated protein
phosphatase 3, EMBRYO DEFECTIVE
2736, flower-specific,
phytochrome-associated protein
phosphatase 3, SERINE/THREONINE
PROTEIN PHOSPHATASE		 0.74 0.31 -0.34
26 AT3G61580 Fatty acid/sphingolipid desaturase AtSLD1, sphingoid LCB desaturase 1 0.74 0.3 -0.32
27 AT5G66140 proteasome alpha subunit D2 proteasome alpha subunit D2 0.73 0.3 -0.3
28 AT4G03120 C2H2 and C2HC zinc fingers superfamily protein 0.73 0.32 -0.32
29 AT4G14230 CBS domain-containing protein with a domain of unknown
function (DUF21)		 0.73 0.32 -0.29
30 AT3G03950 evolutionarily conserved C-terminal region 1 evolutionarily conserved
C-terminal region 1		 0.73 0.33 -0.32
31 AT3G59990 methionine aminopeptidase 2B methionine aminopeptidase 2B 0.73 0.31 -0.32
32 AT2G26990 proteasome family protein ATCSN2, CONSTITUTIVE
PHOTOMORPHOGENIC 12, CSN2, FUSCA
12		 0.73 0.32 -0.3
33 AT3G54030 Protein kinase protein with tetratricopeptide repeat domain 0.73 0.32 -0.32
34 AT3G09840 cell division cycle 48 ATCDC48, cell division cycle 48,
CDC48A		 0.72 0.28 -0.31
35 AT3G27550 RNA-binding CRS1 / YhbY (CRM) domain protein 0.72 0.33 -0.31
36 AT3G04610 RNA-binding KH domain-containing protein flowering locus KH domain 0.72 0.31 -0.31
37 AT5G19000 BTB-POZ and MATH domain 1 BTB-POZ AND MATH DOMAIN 1, BTB-POZ
and MATH domain 1		 0.72 0.32 -0.33
38 AT1G47710 Serine protease inhibitor (SERPIN) family protein 0.72 0.32 -0.32
39 AT3G12570 FYD FYD 0.72 0.32 -0.3
40 AT5G22060 DNAJ homologue 2 ARABIDOPSIS THALIANA DNAJ
HOMOLOGUE 2, DNAJ homologue 2		 0.72 0.32 -0.32
41 AT1G02460 Pectin lyase-like superfamily protein 0.71 0.31 -0.32
42 AT4G25280 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.71 0.3 -0.31
43 AT5G03340 ATPase, AAA-type, CDC48 protein 0.71 0.33 -0.32
44 AT4G02570 cullin 1 cullin 1, AUXIN RESISTANT 6,
cullin 1		 0.71 0.32 -0.32
45 AT3G63400 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.71 0.33 -0.33
46 AT3G53990 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.71 0.31 -0.3
47 AT4G17310 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9
plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT5G47455.7); Has 164 Blast hits to 164
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.71 0.31 -0.34
48 AT4G12790 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.71 0.29 -0.31
49 AT5G50840 CONTAINS InterPro DOMAIN/s: Taxilin (InterPro:IPR019132);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.71 0.33 -0.3
50 AT2G38670 phosphorylethanolamine cytidylyltransferase 1 phosphorylethanolamine
cytidylyltransferase 1		 0.71 0.33 -0.3
51 AT3G16910 acyl-activating enzyme 7 acyl-activating enzyme 7, ACETATE
NON-UTILIZING 1		 -0.7 0.33 -0.32
52 AT1G07420 sterol 4-alpha-methyl-oxidase 2-1 Arabidopsis thaliana sterol
4-alpha-methyl oxidase 1, sterol
4-alpha-methyl-oxidase 2-1		 0.7 0.33 -0.32
53 AT3G59350 Protein kinase superfamily protein 0.7 0.33 -0.3
54 AT3G05500 Rubber elongation factor protein (REF) 0.7 0.29 -0.32
55 AT3G51100 unknown protein; Has 48 Blast hits to 48 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.7 0.33 -0.3
56 AT5G52200 phosphoprotein phosphatase inhibitors AtI-2, inhibitor-2 0.7 0.32 -0.31
57 AT3G58975 pseudogene of F-box family protein -0.69 0.33 -0.31
58 AT3G52870 IQ calmodulin-binding motif family protein 0.69 0.33 -0.32
59 AT3G51550 Malectin/receptor-like protein kinase family protein FERONIA 0.69 0.31 -0.32
60 AT3G26280 cytochrome P450, family 71, subfamily B, polypeptide 4 cytochrome P450, family 71,
subfamily B, polypeptide 4		 -0.69 0.31 -0.31
61 AT5G59340 WUSCHEL related homeobox 2 WUSCHEL related homeobox 2 -0.69 0.33 -0.32
62 AT5G63120 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.69 0.31 -0.33
63 AT5G42780 homeobox protein 27 homeobox protein 27, homeobox
protein 27, ZINC FINGER
HOMEODOMAIN 13		 -0.69 0.28 -0.31
64 AT5G53000 2A phosphatase associated protein of 46 kD 2A phosphatase associated protein
of 46 kD		 0.69 0.32 -0.32
65 AT1G19370 unknown protein; LOCATED IN: endoplasmic reticulum;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G75140.1); Has 45 Blast hits to 43
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.69 0.3 -0.33
66 AT5G25760 peroxin4 peroxin4, ubiquitin-conjugating
enzyme 21		 0.69 0.31 -0.35
67 AT1G37130 nitrate reductase 2 ARABIDOPSIS NITRATE REDUCTASE 2,
B29, CHLORATE RESISTANT 3, nitrate
reductase 2, NIA2-1, NITRATE
REDUCTASE, NITRATE REDUCTASE 2		 -0.68 0.3 -0.3
68 AT4G37190 LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 20
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Beta tubulin, autoregulation
binding site (InterPro:IPR013838), Misato Segment II,
myosin-like (InterPro:IPR019605), Tubulin/FtsZ, N-terminal
(InterPro:IPR019746); Has 345 Blast hits to 341 proteins in
161 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi
- 140; Plants - 55; Viruses - 0; Other Eukaryotes - 19
(source: NCBI BLink).		 0.68 0.32 -0.34
69 AT2G19450 membrane bound O-acyl transferase (MBOAT) family protein ABX45, AS11, Arabidopsis thaliana
acyl-CoA:diacylglycerol
acyltransferase,
acyl-CoA:diacylglycerol
acyltransferase 1, RDS1,
TRIACYLGLYCEROL BIOSYNTHESIS
DEFECT 1		 0.68 0.3 -0.3
70 AT2G20580 26S proteasome regulatory subunit S2 1A 26S PROTEASOME REGULATORY SUBUNIT
S2 1A, 26S proteasome regulatory
subunit S2 1A		 0.68 0.29 -0.34
71 AT1G59830 protein phosphatase 2A-2 protein phosphatase 2A-2 0.68 0.33 -0.29
72 AT5G62910 RING/U-box superfamily protein 0.68 0.33 -0.3
73 AT1G56300 Chaperone DnaJ-domain superfamily protein 0.68 0.31 -0.33
74 AT2G17980 Sec1/munc18-like (SM) proteins superfamily ATSLY1 0.68 0.3 -0.34
75 AT3G26640 Transducin/WD40 repeat-like superfamily protein LIGHT-REGULATED WD 2 0.68 0.32 -0.33
76 AT5G60540 pyridoxine biosynthesis 2 PYRIDOXINE BIOSYNTHESIS 2, EMBRYO
DEFECTIVE 2407, pyridoxine
biosynthesis 2		 0.68 0.33 -0.3
77 AT2G16365 F-box family protein 0.68 0.32 -0.31
78 AT2G41630 transcription factor IIB transcription factor IIB 0.68 0.32 -0.31
79 AT5G14240 Thioredoxin superfamily protein 0.68 0.33 -0.33
80 AT4G25500 arginine/serine-rich splicing factor 35 arginine/serine-rich splicing
factor 40, AT-SRP40, ARABIDOPSIS
THALIANA ARGININE/SERINE-RICH
SPLICING FACTOR 35, ATRSP40,
arginine/serine-rich splicing
factor 40, arginine/serine-rich
splicing factor 35		 0.68 0.33 -0.3
81 AT5G54660 HSP20-like chaperones superfamily protein -0.68 0.31 -0.32
82 AT1G53500 NAD-dependent epimerase/dehydratase family protein ARABIDOPSIS THALIANA
MUCILAGE-MODIFIED 4, ARABIDOPSIS
THALIANA RHAMNOSE BIOSYNTHESIS 2,
MUCILAGE-MODIFIED 4, RHAMNOSE
BIOSYNTHESIS 2		 0.68 0.32 -0.32
83 AT3G44110 DNAJ homologue 3 ATJ, DNAJ homologue 3, J3 0.68 0.34 -0.29
84 AT3G57340 Heat shock protein DnaJ, N-terminal with domain of unknown
function (DUF1977)		 0.68 0.3 -0.32
85 AT4G34120 Cystathionine beta-synthase (CBS) family protein CBS domain containing protein 2,
CYSTATHIONE [BETA]-SYNTHASE
DOMAIN-CONTAINING PROTEIN 1, LOSS
OF THE TIMING OF ET AND JA
BIOSYNTHESIS 1		 0.68 0.33 -0.3
86 AT1G30480 D111/G-patch domain-containing protein DNA-DAMAGE-REPAIR/TOLERATION
PROTEIN 111		 0.68 0.31 -0.31
87 AT5G62350 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.67 0.33 -0.31
88 AT2G40620 Basic-leucine zipper (bZIP) transcription factor family
protein		 0.67 0.31 -0.34
89 AT5G02820 Spo11/DNA topoisomerase VI, subunit A protein BRASSINOSTEROID INSENSITIVE 5,
ROOT HAIRLESS 2		 0.67 0.31 -0.32
90 AT3G07740 homolog of yeast ADA2 2A homolog of yeast ADA2 2A, ATADA2A,
HAC10, HXA02, HXA2		 0.67 0.32 -0.31
91 AT3G47120 RNA recognition motif (RRM)-containing protein 0.67 0.33 -0.32
92 AT3G54170 FKBP12 interacting protein 37 FKBP12 interacting protein 37,
FKBP12 interacting protein 37		 0.67 0.31 -0.32
93 AT5G58130 RNA-binding (RRM/RBD/RNP motifs) family protein REPRESSOR OF SILENCING 3 0.67 0.31 -0.3
94 AT5G48250 B-box type zinc finger protein with CCT domain 0.67 0.3 -0.33
95 AT5G20880 transposable element gene 0.67 0.31 -0.3
96 AT4G04210 plant UBX domain containing protein 4 plant UBX domain containing
protein 4		 0.67 0.3 -0.32
97 AT3G26890 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G41110.1); Has 393 Blast hits
to 383 proteins in 134 species: Archae - 0; Bacteria - 61;
Metazoa - 171; Fungi - 74; Plants - 80; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 -0.67 0.33 -0.3
98 AT2G44880 Pentatricopeptide repeat (PPR-like) superfamily protein 0.67 0.29 -0.32
99 AT2G21520 Sec14p-like phosphatidylinositol transfer family protein 0.67 0.33 -0.3
100 AT5G49400 zinc knuckle (CCHC-type) family protein 0.67 0.31 -0.32
101 AT2G15440 Protein of unknown function (DUF579) -0.67 0.32 -0.33
102 AT4G27880 Protein with RING/U-box and TRAF-like domains 0.67 0.32 -0.31
103 AT2G24280 alpha/beta-Hydrolases superfamily protein -0.67 0.3 -0.3
104 AT2G35530 basic region/leucine zipper transcription factor 16 AtbZIP16, basic region/leucine
zipper transcription factor 16		 0.67 0.32 -0.3
105 AT4G32240 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.66 0.31 -0.31
106 AT3G28960 Transmembrane amino acid transporter family protein -0.66 0.31 -0.3
107 AT4G14180 putative recombination initiation defect 1 putative recombination initiation
defect 1, putative recombination
initiation defect 1		 -0.66 0.31 -0.32
108 AT3G28130 nodulin MtN21 /EamA-like transporter family protein -0.66 0.29 -0.3
109 AT4G10060 Beta-glucosidase, GBA2 type family protein -0.66 0.31 -0.31
110 AT3G11620 alpha/beta-Hydrolases superfamily protein -0.65 0.33 -0.33
111 AT2G23200 Protein kinase superfamily protein -0.65 0.32 -0.3
112 AT1G16780 Inorganic H pyrophosphatase family protein AtVHP2;2, VHP2;2 -0.65 0.3 -0.32
113 AT1G15960 NRAMP metal ion transporter 6 ATNRAMP6, NRAMP metal ion
transporter 6		 -0.64 0.32 -0.3
114 AT2G07680 multidrug resistance-associated protein 11 ATP-binding cassette C13,
multidrug resistance-associated
protein 11, multidrug
resistance-associated protein 11		 -0.64 0.33 -0.34
115 AT3G51590 lipid transfer protein 12 lipid transfer protein 12 -0.64 0.33 -0.33
116 AT5G47720 Thiolase family protein -0.64 0.3 -0.31
117 AT1G59580 mitogen-activated protein kinase homolog 2 mitogen-activated protein kinase
homolog 2, mitogen-activated
protein kinase homolog 2		 -0.64 0.31 -0.3
118 AT5G40470 RNI-like superfamily protein -0.63 0.33 -0.28
119 AT5G10030 TGACG motif-binding factor 4 OCS ELEMENT BINDING FACTOR 4,
TGACG motif-binding factor 4		 -0.63 0.31 -0.32
120 AT5G61250 glucuronidase 1 glucuronidase 1, glucuronidase 1 -0.63 0.32 -0.31
121 AT4G16745 Exostosin family protein -0.63 0.31 -0.31
122 AT3G29770 methyl esterase 11 ARABIDOPSIS THALIANA METHYL
ESTERASE 11, methyl esterase 11		 -0.63 0.32 -0.32
123 AT3G11280 Duplicated homeodomain-like superfamily protein -0.63 0.3 -0.34
124 AT5G27950 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.62 0.33 -0.28
125 AT2G34490 cytochrome P450, family 710, subfamily A, polypeptide 2 cytochrome P450, family 710,
subfamily A, polypeptide 2		 -0.62 0.3 -0.28
126 AT4G19420 Pectinacetylesterase family protein -0.62 0.31 -0.29
127 AT1G54390 PHD finger protein-related INHIBITOR OF GROWTH 2 -0.62 0.29 -0.31
128 AT2G07110 BEST Arabidopsis thaliana protein match is: Ribosomal
protein S5 domain 2-like superfamily protein
(TAIR:AT3G46210.6); Has 82 Blast hits to 82 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2;
Plants - 75; Viruses - 0; Other Eukaryotes - 5 (source:
NCBI BLink).		 -0.62 0.32 -0.31
129 AT5G03230 Protein of unknown function, DUF584 -0.61 0.31 -0.32
130 AT5G61190 putative endonuclease or glycosyl hydrolase with C2H2-type
zinc finger domain		 -0.61 0.32 -0.32
131 AT3G15940 UDP-Glycosyltransferase superfamily protein -0.61 0.32 -0.32
132 AT4G22790 MATE efflux family protein -0.61 0.33 -0.31
133 AT4G02075 RING/FYVE/PHD zinc finger superfamily protein pitchoun 1 -0.61 0.32 -0.31
134 AT4G08160 glycosyl hydrolase family 10 protein / carbohydrate-binding
domain-containing protein		 -0.59 0.3 -0.29
135 AT3G52480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 10 plant structures;
EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis,
petal differentiation and expansion stage; Has 28 Blast
hits to 28 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.31 -0.31
136 AT3G23590 REF4-related 1 MED33A, REF4-related 1 -0.59 0.31 -0.32
137 AT1G34545 transposable element gene -0.59 0.28 -0.31
138 AT4G36350 purple acid phosphatase 25 ARABIDOPSIS THALIANA PURPLE ACID
PHOSPHATASE 25, purple acid
phosphatase 25		 -0.59 0.35 -0.32