AT4G22740 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G22740
Description glycine-rich protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G22740 glycine-rich protein 1 0.29 -0.29
2 AT3G23280 XB3 ortholog 5 in Arabidopsis thaliana XB3 ortholog 5 in Arabidopsis
thaliana		 0.81 0.29 -0.31
3 AT1G77550 tubulin-tyrosine ligases;tubulin-tyrosine ligases -0.8 0.32 -0.31
4 AT2G22430 homeobox protein 6 homeobox protein 6, homeobox
protein 6		 0.79 0.32 -0.31
5 AT1G15930 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.77 0.32 -0.31
6 AT2G35840 Sucrose-6F-phosphate phosphohydrolase family protein 0.77 0.35 -0.32
7 AT5G27280 Zim17-type zinc finger protein 0.76 0.32 -0.3
8 AT1G68570 Major facilitator superfamily protein 0.75 0.35 -0.32
9 AT2G23350 poly(A) binding protein 4 poly(A) binding protein 4, POLY(A)
BINDING PROTEIN 4		 -0.75 0.32 -0.31
10 AT4G25650 ACD1-like ACD1-like,
PROTOCHLOROPHYLLIDE-DEPENDENT
TRANSLOCON COMPONENT, 52 KDA,
TRANSLOCON AT THE INNER ENVELOPE
MEMBRANE OF CHLOROPLASTS, 55 KDA -
IV		 0.74 0.31 -0.31
11 AT1G18710 myb domain protein 47 myb domain protein 47, myb domain
protein 47		 0.74 0.32 -0.33
12 AT1G53660 nodulin MtN21 /EamA-like transporter family protein -0.74 0.32 -0.31
13 AT3G55740 proline transporter 2 PROLINE TRANSPORTER 2, proline
transporter 2		 0.74 0.32 -0.31
14 AT1G58360 amino acid permease 1 amino acid permease 1, NEUTRAL
AMINO ACID TRANSPORTER 2		 0.74 0.3 -0.33
15 AT1G06790 RNA polymerase Rpb7 N-terminal domain-containing protein -0.74 0.32 -0.32
16 AT4G25090 Riboflavin synthase-like superfamily protein -0.74 0.31 -0.34
17 AT1G29395 COLD REGULATED 314 INNER MEMBRANE 1 COLD REGULATED 314 THYLAKOID
MEMBRANE 1, COLD REGULATED 314
INNER MEMBRANE 1, cold regulated
414 thylakoid membrane 1		 0.73 0.3 -0.32
18 AT4G01550 NAC domain containing protein 69 NAC domain containing protein 69,
NAC domain containing protein 69,
NAC with Transmembrane Motif 2		 0.73 0.31 -0.32
19 AT4G02590 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 unfertilized embryo sac 12 0.73 0.31 -0.33
20 AT3G52460 hydroxyproline-rich glycoprotein family protein -0.73 0.3 -0.32
21 AT2G46270 G-box binding factor 3 G-box binding factor 3 0.73 0.31 -0.32
22 AT3G26610 Pectin lyase-like superfamily protein -0.73 0.31 -0.32
23 AT2G04880 zinc-dependent activator protein-1 ATWRKY1, WRKY1, zinc-dependent
activator protein-1		 0.72 0.32 -0.31
24 AT5G47650 nudix hydrolase homolog 2 nudix hydrolase homolog 2,
ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 2, nudix
hydrolase homolog 2		 0.72 0.33 -0.33
25 AT1G20693 high mobility group B2 HIGH MOBILITY GROUP BETA 1, high
mobility group B2,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP D 02,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP D 2		 0.72 0.33 -0.32
26 AT3G47160 RING/U-box superfamily protein 0.72 0.31 -0.31
27 AT2G20740 Tetraspanin family protein 0.72 0.32 -0.32
28 AT2G40150 TRICHOME BIREFRINGENCE-LIKE 28 TRICHOME BIREFRINGENCE-LIKE 28 -0.72 0.31 -0.33
29 AT3G23940 dehydratase family -0.71 0.35 -0.33
30 AT1G64970 gamma-tocopherol methyltransferase gamma-tocopherol
methyltransferase, TMT1, VITAMIN E
DEFICIENT 4		 0.71 0.32 -0.31
31 AT3G06170 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 0.71 0.33 -0.28
32 AT5G24830 Tetratricopeptide repeat (TPR)-like superfamily protein -0.71 0.33 -0.31
33 AT5G59850 Ribosomal protein S8 family protein -0.71 0.34 -0.32
34 AT1G28140 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF2301, transmembrane
(InterPro:IPR019275); Has 140 Blast hits to 140 proteins in
72 species: Archae - 0; Bacteria - 86; Metazoa - 10; Fungi
- 0; Plants - 41; Viruses - 0; Other Eukaryotes - 3
(source: NCBI BLink).		 0.71 0.32 -0.29
35 AT1G29390 cold regulated 314 thylakoid membrane 2 cold regulated 314 thylakoid
membrane 2, COLD REGULATED 314
INNER MEMBRANE 2		 0.71 0.34 -0.33
36 AT2G42540 cold-regulated 15a COR15, cold-regulated 15a 0.71 0.32 -0.3
37 AT5G38895 RING/U-box superfamily protein 0.71 0.3 -0.32
38 AT1G51090 Heavy metal transport/detoxification superfamily protein 0.71 0.32 -0.34
39 AT4G19390 Uncharacterised protein family (UPF0114) 0.7 0.3 -0.3
40 AT1G65840 polyamine oxidase 4 polyamine oxidase 4, polyamine
oxidase 4		 -0.7 0.32 -0.29
41 AT4G14020 Rapid alkalinization factor (RALF) family protein 0.7 0.3 -0.31
42 AT1G04590 BEST Arabidopsis thaliana protein match is:
Pentatricopeptide repeat (PPR) superfamily protein
(TAIR:AT4G21190.1); Has 111 Blast hits to 111 proteins in
15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 109; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.7 0.31 -0.3
43 AT5G04370 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 NAMT1 0.7 0.31 -0.31
44 AT2G16990 Major facilitator superfamily protein 0.7 0.3 -0.3
45 AT4G19960 K+ uptake permease 9 ATKUP9, HAK9, KT9, K+ uptake
permease 9		 0.7 0.33 -0.3
46 AT3G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52550.1); Has 20 Blast hits
to 20 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.7 0.3 -0.32
47 AT1G54830 nuclear factor Y, subunit C3 nuclear factor Y, subunit C3 0.7 0.31 -0.35
48 AT2G39040 Peroxidase superfamily protein -0.7 0.32 -0.3
49 AT1G78450 SOUL heme-binding family protein -0.69 0.31 -0.32
50 AT5G50160 ferric reduction oxidase 8 FERRIC REDUCTION OXIDASE 8, ferric
reduction oxidase 8		 0.69 0.31 -0.3
51 AT1G66440 Cysteine/Histidine-rich C1 domain family protein -0.69 0.31 -0.34
52 AT5G12140 cystatin-1 cystatin-1, cystatin-1 0.69 0.31 -0.32
53 AT2G22240 myo-inositol-1-phosphate synthase 2 INOSITOL 3-PHOSPHATE SYNTHASE 2,
MYO-INOSITOL-1-PHOSTPATE SYNTHASE
2, myo-inositol-1-phosphate
synthase 2		 0.69 0.33 -0.32
54 AT2G42530 cold regulated 15b cold regulated 15b 0.69 0.3 -0.32
55 AT1G33970 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.69 0.3 -0.33
56 AT5G51890 Peroxidase superfamily protein 0.69 0.3 -0.3
57 AT3G21360 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.69 0.34 -0.31
58 AT4G00710 BR-signaling kinase 3 BR-signaling kinase 3 -0.69 0.29 -0.31
59 AT2G31740 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.69 0.32 -0.31
60 AT1G07795 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G28725.1); Has 38 Blast hits
to 38 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.31 -0.31
61 AT1G62280 SLAC1 homologue 1 SLAC1 homologue 1 -0.69 0.31 -0.3
62 AT1G55680 Transducin/WD40 repeat-like superfamily protein 0.68 0.31 -0.33
63 AT3G13760 Cysteine/Histidine-rich C1 domain family protein -0.68 0.31 -0.33
64 AT1G69295 plasmodesmata callose-binding protein 4 plasmodesmata callose-binding
protein 4		 0.68 0.33 -0.31
65 AT4G32940 gamma vacuolar processing enzyme gamma vacuolar processing enzyme,
GAMMAVPE		 0.68 0.31 -0.32
66 AT3G03870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G18130.1); Has 41 Blast hits
to 41 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.33 -0.3
67 AT3G01630 Major facilitator superfamily protein -0.68 0.31 -0.31
68 AT4G26640 WRKY family transcription factor family protein AtWRKY20, WRKY20 0.68 0.33 -0.32
69 AT2G31660 ARM repeat superfamily protein enhanced miRNA activity 1, SUPER
SENSITIVE TO ABA AND DROUGHT2,
UNARMED 9		 -0.68 0.32 -0.32
70 AT1G60470 galactinol synthase 4 galactinol synthase 4, galactinol
synthase 4		 0.68 0.31 -0.32
71 AT5G39570 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cytosol, nucleus;
EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14
growth stages; BEST Arabidopsis thaliana protein match is:
glycine-rich protein (TAIR:AT3G29075.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.68 0.33 -0.31
72 AT1G28230 purine permease 1 ATPUP1, purine permease 1 0.67 0.31 -0.32
73 AT3G54820 plasma membrane intrinsic protein 2;5 plasma membrane intrinsic protein
2;5, PLASMA MEMBRANE INTRINSIC
PROTEIN 2D		 0.67 0.32 -0.33
74 AT5G19040 isopentenyltransferase 5 Arabidopsis thaliana
ISOPENTENYLTRANSFERASE 5,
isopentenyltransferase 5		 -0.67 0.35 -0.32
75 AT3G13130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: male gametophyte; Has
140 Blast hits to 132 proteins in 41 species: Archae - 2;
Bacteria - 4; Metazoa - 29; Fungi - 20; Plants - 51;
Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).		 0.67 0.31 -0.3
76 AT3G25540 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 LONGEVITY ASSURANCE GENE 1 -0.67 0.32 -0.32
77 AT5G01260 Carbohydrate-binding-like fold 0.67 0.34 -0.34
78 AT1G72200 RING/U-box superfamily protein -0.67 0.32 -0.31
79 AT4G15290 Cellulose synthase family protein ATCSLB05, CELLULOSE SYNTHASE LIKE
5, CSLB05		 -0.66 0.32 -0.31
80 AT3G47980 Integral membrane HPP family protein -0.66 0.29 -0.31
81 AT3G07390 auxin-responsive family protein Auxin-Induced in Root cultures 12 0.66 0.32 -0.33
82 AT5G14120 Major facilitator superfamily protein -0.66 0.29 -0.32
83 AT1G70160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G27020.1); Has 108 Blast hits to 108 proteins in
20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 89; Viruses - 0; Other Eukaryotes - 19 (source:
NCBI BLink).		 0.66 0.3 -0.31
84 AT1G07250 UDP-glucosyl transferase 71C4 UDP-glucosyl transferase 71C4 0.66 0.31 -0.32
85 AT2G20350 Integrase-type DNA-binding superfamily protein 0.66 0.29 -0.3
86 AT5G60870 Regulator of chromosome condensation (RCC1) family protein RCC1/UVR8/GEF-like 3 -0.66 0.31 -0.3
87 AT3G12540 Protein of unknown function, DUF547 -0.66 0.33 -0.35
88 AT1G29090 Cysteine proteinases superfamily protein -0.65 0.33 -0.33
89 AT3G49190 O-acyltransferase (WSD1-like) family protein -0.65 0.31 -0.33
90 AT3G61100 Putative endonuclease or glycosyl hydrolase -0.65 0.31 -0.31
91 AT3G01260 Galactose mutarotase-like superfamily protein -0.65 0.32 -0.31
92 AT1G76010 Alba DNA/RNA-binding protein -0.65 0.33 -0.31
93 AT3G06040 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 -0.65 0.31 -0.35
94 AT2G45750 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.65 0.31 -0.33
95 AT3G23660 Sec23/Sec24 protein transport family protein -0.65 0.31 -0.3
96 AT4G16570 protein arginine methyltransferase 7 ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 7,
protein arginine methyltransferase
7		 -0.65 0.31 -0.32
97 AT3G47770 ABC2 homolog 5 ATP-binding cassette A6, A.
THALIANA ABC2 HOMOLOG 5, ABC2
homolog 5		 -0.65 0.33 -0.31
98 AT3G09780 CRINKLY4 related 1 ATCRR1, CRINKLY4 related 1 -0.65 0.29 -0.3
99 AT2G37700 Fatty acid hydroxylase superfamily -0.64 0.31 -0.31
100 AT1G05570 callose synthase 1 ATGSL06, ATGSL6, callose synthase
1, GSL06, GLUCAN SYNTHASE-LIKE 6		 -0.64 0.32 -0.33
101 AT3G06460 GNS1/SUR4 membrane protein family -0.64 0.34 -0.31
102 AT1G69210 Uncharacterised protein family UPF0090 -0.64 0.32 -0.33
103 AT4G22130 STRUBBELIG-receptor family 8 STRUBBELIG-receptor family 8 -0.64 0.3 -0.32
104 AT2G25580 Tetratricopeptide repeat (TPR)-like superfamily protein -0.63 0.33 -0.32
105 AT4G14390 Ankyrin repeat family protein -0.63 0.32 -0.32
106 AT5G53070 Ribosomal protein L9/RNase H1 -0.63 0.32 -0.33
107 AT5G17340 Putative membrane lipoprotein -0.63 0.32 -0.3
108 AT5G48450 SKU5 similar 3 SKU5 similar 3 -0.63 0.28 -0.32
109 AT1G07770 ribosomal protein S15A ribosomal protein S15A -0.63 0.33 -0.33
110 AT5G06800 myb-like HTH transcriptional regulator family protein -0.63 0.31 -0.32
111 AT5G06740 Concanavalin A-like lectin protein kinase family protein -0.63 0.31 -0.32
112 AT1G09660 RNA-binding KH domain-containing protein -0.62 0.31 -0.31
113 AT5G40450 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plasma membrane; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.62 0.32 -0.31
114 AT5G53250 arabinogalactan protein 22 arabinogalactan protein 22,
ARABINOGALACTAN PROTEIN 22		 -0.62 0.3 -0.31
115 AT3G13580 Ribosomal protein L30/L7 family protein -0.62 0.32 -0.34
116 AT5G45880 Pollen Ole e 1 allergen and extensin family protein -0.62 0.31 -0.34
117 AT5G53460 NADH-dependent glutamate synthase 1 NADH-dependent glutamate synthase
1		 -0.62 0.31 -0.29
118 AT2G37160 Transducin/WD40 repeat-like superfamily protein -0.62 0.32 -0.32
119 AT1G11540 Sulfite exporter TauE/SafE family protein -0.62 0.3 -0.32
120 AT3G18510 unknown protein; Has 15 Blast hits to 15 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.62 0.31 -0.31
121 AT2G46470 inner membrane protein OXA1-like inner membrane protein OXA1-like -0.62 0.33 -0.33
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
122 C0017 sn-Glycero-3-phosphocholine sn-Glycero-3-phosphocholine L-1-Glycero-3-phosphocholine - 0.88 0.44 -0.46 C0017