AT4G22140 : EARLY BOLTING IN SHORT DAYS
Query Information
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AGICode AT4G22140
Description PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G22140 PHD finger family protein / bromo-adjacent homology (BAH)
domain-containing protein		 EARLY BOLTING IN SHORT DAYS 1 0.31 -0.31
2 AT5G35980 yeast YAK1-related gene 1 yeast YAK1-related gene 1 -0.79 0.34 -0.31
3 AT1G23230 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23
(InterPro:IPR021629); Has 187 Blast hits to 184 proteins in
67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi
- 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9
(source: NCBI BLink).		 -0.78 0.29 -0.33
4 AT4G08500 MAPK/ERK kinase kinase 1 ARAKIN, ATMEKK1, MAPKKK8, MAPK/ERK
kinase kinase 1		 -0.75 0.3 -0.31
5 AT2G26780 ARM repeat superfamily protein -0.75 0.34 -0.29
6 AT5G35980 yeast YAK1-related gene 1 yeast YAK1-related gene 1 -0.74 0.32 -0.31
7 AT2G26890 DNAJ heat shock N-terminal domain-containing protein GRAVITROPISM DEFECTIVE 2,
KATAMARI2		 -0.74 0.31 -0.3
8 AT1G32130 Transcription elongation factor (TFIIS) family protein ARABIDOPSIS THALIANA IWS1 (FROM
YEAST INTERACTS WITH SPT6), HIGH
NITROGEN INSENSITIVE 9, IWS1		 -0.74 0.32 -0.33
9 AT3G62370 heme binding 0.73 0.32 -0.33
10 AT3G18210 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.73 0.32 -0.32
11 AT3G14270 phosphatidylinositol-4-phosphate 5-kinase family protein FORMS APLOID AND BINUCLEATE CELLS
1B		 -0.73 0.33 -0.3
12 AT5G23550 Got1/Sft2-like vescicle transport protein family 0.73 0.32 -0.29
13 AT3G07800 Thymidine kinase 0.72 0.3 -0.34
14 AT2G38160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G40070.2); Has 972 Blast hits
to 731 proteins in 211 species: Archae - 0; Bacteria - 236;
Metazoa - 194; Fungi - 201; Plants - 218; Viruses - 32;
Other Eukaryotes - 91 (source: NCBI BLink).		 0.72 0.3 -0.33
15 AT5G35560 DENN (AEX-3) domain-containing protein -0.72 0.33 -0.31
16 AT5G23110 Zinc finger, C3HC4 type (RING finger) family protein -0.71 0.33 -0.32
17 AT5G47520 RAB GTPase homolog A5A RAB GTPase homolog A5A, RAB GTPase
homolog A5A		 0.71 0.33 -0.33
18 AT1G07880 Protein kinase superfamily protein ATMPK13 0.71 0.3 -0.32
19 AT4G14220 RING-H2 group F1A RING-H2 group F1A -0.7 0.32 -0.31
20 AT1G03820 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1345 Blast hits to
1122 proteins in 102 species: Archae - 2; Bacteria - 28;
Metazoa - 28; Fungi - 30; Plants - 109; Viruses - 0; Other
Eukaryotes - 1148 (source: NCBI BLink).		 0.7 0.31 -0.32
21 AT3G02260 auxin transport protein (BIG) ATTENUATED SHADE AVOIDANCE 1, BIG,
CORYMBOSA1, DARK OVER-EXPRESSION
OF CAB 1, LOW PHOSPHATE-RESISTANT
ROOT 1, TRANSPORT INHIBITOR
RESPONSE 3, UMBRELLA 1		 -0.7 0.3 -0.32
22 AT1G50030 target of rapamycin target of rapamycin -0.69 0.32 -0.31
23 AT1G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast
hits to 43153 proteins in 1828 species: Archae - 30;
Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants -
7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI
BLink).		 -0.69 0.3 -0.32
24 AT1G24460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G31570.1); Has 181008 Blast hits to 85359 proteins
in 3551 species: Archae - 3290; Bacteria - 48304; Metazoa -
70793; Fungi - 13943; Plants - 10118; Viruses - 785; Other
Eukaryotes - 33775 (source: NCBI BLink).		 TGN-localized SYP41 interacting
protein		 -0.69 0.3 -0.33
25 AT3G25100 cell division cycle 45 cell division cycle 45 0.68 0.3 -0.31
26 AT3G11960 Cleavage and polyadenylation specificity factor (CPSF) A
subunit protein		 -0.68 0.32 -0.3
27 AT1G80520 Sterile alpha motif (SAM) domain-containing protein 0.68 0.31 -0.32
28 AT3G27400 Pectin lyase-like superfamily protein 0.68 0.32 -0.31
29 AT5G20030 Plant Tudor-like RNA-binding protein 0.68 0.32 -0.31
30 AT4G09550 AtGCP3 interacting protein 1 ARABIDOPSIS ATGCP3 INTERACTING
PROTEIN 1, AtGCP3 interacting
protein 1		 0.67 0.31 -0.33
31 AT3G15980 Coatomer, beta' subunit -0.67 0.3 -0.32
32 AT1G59930 MADS-box family protein 0.67 0.33 -0.32
33 AT1G02080 transcription regulators -0.67 0.31 -0.32
34 AT2G42100 Actin-like ATPase superfamily protein 0.67 0.32 -0.32
35 AT5G59860 RNA-binding (RRM/RBD/RNP motifs) family protein -0.67 0.34 -0.33
36 AT4G33240 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion
binding;1-phosphatidylinositol-3-phosphate 5-kinases		 FORMS APLOID AND BINUCLEATE CELLS
1A		 -0.66 0.32 -0.31
37 AT5G27150 Na+/H+ exchanger 1 AT-NHX1, ATNHX, ATNHX1, Na+/H+
exchanger 1		 -0.66 0.3 -0.35
38 AT2G39340 SAC3/GANP/Nin1/mts3/eIF-3 p25 family AtSAC3A, yeast Sac3 homolog A -0.66 0.32 -0.3
39 AT3G54630 CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80
(InterPro:IPR005550); Has 24780 Blast hits to 15608
proteins in 1321 species: Archae - 545; Bacteria - 2969;
Metazoa - 12597; Fungi - 2181; Plants - 1581; Viruses - 39;
Other Eukaryotes - 4868 (source: NCBI BLink).		 0.66 0.32 -0.31
40 AT1G29140 Pollen Ole e 1 allergen and extensin family protein -0.65 0.31 -0.33
41 AT3G07160 glucan synthase-like 10 glucan synthase-like 10, CALS9,
gsl10, glucan synthase-like 10		 -0.65 0.32 -0.32
42 AT1G36510 Nucleic acid-binding proteins superfamily -0.65 0.32 -0.31
43 AT2G03140 alpha/beta-Hydrolases superfamily protein -0.64 0.3 -0.31
44 AT2G41350 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G21980.1); Has 188 Blast hits
to 188 proteins in 66 species: Archae - 0; Bacteria - 12;
Metazoa - 90; Fungi - 15; Plants - 54; Viruses - 0; Other
Eukaryotes - 17 (source: NCBI BLink).		 AtAUG1, augmin 1, EMBRYO DEFECTIVE
2819		 0.64 0.32 -0.3
45 AT4G32640 Sec23/Sec24 protein transport family protein -0.64 0.32 -0.33
46 AT1G72710 casein kinase 1-like protein 2 casein kinase 1-like protein 2 -0.64 0.32 -0.33
47 AT2G28290 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHROMATIN REMODELING COMPLEX
SUBUNIT R 3, SPLAYED		 -0.64 0.35 -0.32
48 AT2G25730 unknown protein; Has 157 Blast hits to 144 proteins in 62
species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi -
0; Plants - 35; Viruses - 0; Other Eukaryotes - 21 (source:
NCBI BLink).		 -0.64 0.35 -0.33
49 AT4G34310 alpha/beta-Hydrolases superfamily protein -0.64 0.31 -0.33
50 AT2G01120 origin recognition complex subunit 4 ORIGIN RECOGNITION COMPLEX SUBUNIT
4, origin recognition complex
subunit 4		 0.64 0.31 -0.31
51 AT2G33600 NAD(P)-binding Rossmann-fold superfamily protein 0.63 0.29 -0.3
52 AT1G75550 glycine-rich protein -0.63 0.33 -0.32
53 AT3G50070 CYCLIN D3;3 CYCLIN D3;3 0.63 0.3 -0.31
54 AT2G38970 Zinc finger (C3HC4-type RING finger) family protein 0.63 0.31 -0.32
55 AT5G05610 alfin-like 1 alfin-like 1 0.63 0.31 -0.32
56 AT2G02400 NAD(P)-binding Rossmann-fold superfamily protein 0.63 0.31 -0.33
57 AT4G38600 HEAT repeat ;HECT-domain (ubiquitin-transferase) KAKTUS, UBIQUITIN-PROTEIN LIGASE 3 -0.63 0.32 -0.33
58 AT4G17140 pleckstrin homology (PH) domain-containing protein -0.62 0.32 -0.31
59 AT5G03970 F-box associated ubiquitination effector family protein 0.62 0.31 -0.31
60 AT3G09480 Histone superfamily protein 0.62 0.3 -0.34
61 AT4G17140 pleckstrin homology (PH) domain-containing protein -0.62 0.32 -0.31
62 AT3G12810 SNF2 domain-containing protein / helicase domain-containing
protein		 chr13, PHOTOPERIOD-INDEPENDENT
EARLY FLOWERING 1, SRCAP		 -0.62 0.31 -0.3
63 AT2G07360 SH3 domain-containing protein -0.62 0.35 -0.31
64 AT3G32940 RNA-binding KH domain-containing protein -0.62 0.32 -0.31
65 AT1G68450 VQ motif-containing protein PIGMENT DEFECTIVE 337 -0.62 0.33 -0.31
66 AT3G10870 methyl esterase 17 ARABIDOPSIS THALIANA METHYL
ESTERASE 17, methyl esterase 17		 0.62 0.31 -0.31
67 AT3G19540 Protein of unknown function (DUF620) 0.62 0.33 -0.33
68 AT3G05670 RING/U-box protein -0.62 0.29 -0.32
69 AT5G26240 chloride channel D ATCLC-D, chloride channel D -0.61 0.3 -0.31
70 AT3G19170 presequence protease 1 presequence protease 1, ATZNMP,
presequence protease 1		 -0.61 0.3 -0.32
71 AT3G59770 sacI homology domain-containing protein / WW
domain-containing protein		 ARABIDOPSIS THALIANA SUPPRESSOR OF
ACTIN 9, SUPPRESSOR OF ACTIN 9		 -0.61 0.3 -0.34
72 AT4G01290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 1744
Blast hits to 1308 proteins in 219 species: Archae - 0;
Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108;
Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).		 -0.61 0.31 -0.32
73 AT2G43160 ENTH/VHS family protein -0.61 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
74 C0074 Cystine L-Cystine L-Cystine protein precursor -0.77 0.45 -0.41 C0074
75 C0240 Stigmasterol - Stigmasterol plant sterol biosynthesis -0.62 0.46 -0.45 C0240