AT4G22380 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G22380
Description Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G22380 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 1 0.3 -0.29
2 AT2G34570 PIN domain-like family protein maternal effect embryo arrest 21 0.88 0.28 -0.3
3 AT1G11320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 7 plant structures;
EXPRESSED DURING: C globular stage, F mature embryo stage,
petal differentiation and expansion stage, E expanded
cotyledon stage, D bilateral stage; Has 46 Blast hits to 46
proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa -
0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.88 0.32 -0.29
4 AT3G57290 eukaryotic translation initiation factor 3E ATEIF3E-1, ATINT6, eukaryotic
translation initiation factor 3E,
INT-6, INT6, TIF3E1		 0.86 0.31 -0.31
5 AT5G02470 Transcription factor DP DPA 0.85 0.32 -0.31
6 AT5G60990 DEA(D/H)-box RNA helicase family protein 0.85 0.32 -0.32
7 AT4G34950 Major facilitator superfamily protein 0.85 0.32 -0.29
8 AT1G70790 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.85 0.31 -0.31
9 AT5G41970 Metal-dependent protein hydrolase 0.84 0.3 -0.34
10 AT1G80750 Ribosomal protein L30/L7 family protein 0.84 0.3 -0.32
11 AT3G23620 Ribosomal RNA processing Brix domain protein 0.84 0.33 -0.32
12 AT5G61020 evolutionarily conserved C-terminal region 3 evolutionarily conserved
C-terminal region 3		 0.84 0.31 -0.32
13 AT2G25670 BEST Arabidopsis thaliana protein match is: copper ion
binding (TAIR:AT4G32610.1); Has 43784 Blast hits to 26928
proteins in 1799 species: Archae - 86; Bacteria - 6347;
Metazoa - 15971; Fungi - 5398; Plants - 1931; Viruses -
259; Other Eukaryotes - 13792 (source: NCBI BLink).		 0.84 0.31 -0.31
14 AT5G58420 Ribosomal protein S4 (RPS4A) family protein 0.83 0.33 -0.32
15 AT4G13530 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G10080.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.83 0.3 -0.31
16 AT5G14050 Transducin/WD40 repeat-like superfamily protein 0.83 0.31 -0.31
17 AT2G41840 Ribosomal protein S5 family protein 0.83 0.33 -0.32
18 AT1G03530 nuclear assembly factor 1 ATNAF1, nuclear assembly factor 1 0.82 0.32 -0.33
19 AT1G20370 Pseudouridine synthase family protein 0.82 0.33 -0.31
20 AT1G53035 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G15358.1); Has 49 Blast hits to 49 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.82 0.33 -0.3
21 AT1G13160 ARM repeat superfamily protein 0.82 0.33 -0.33
22 AT1G24510 TCP-1/cpn60 chaperonin family protein 0.82 0.32 -0.33
23 AT3G54750 unknown protein; Has 145 Blast hits to 145 proteins in 60
species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.82 0.32 -0.31
24 AT3G20240 Mitochondrial substrate carrier family protein 0.82 0.28 -0.29
25 AT3G51400 Arabidopsis protein of unknown function (DUF241) 0.81 0.31 -0.3
26 AT3G22230 Ribosomal L27e protein family 0.81 0.32 -0.3
27 AT3G02300 Regulator of chromosome condensation (RCC1) family protein -0.8 0.33 -0.31
28 AT5G12200 pyrimidine 2 pyrimidine 2 -0.8 0.31 -0.32
29 AT2G25970 KH domain-containing protein 0.8 0.3 -0.29
30 AT2G29760 Tetratricopeptide repeat (TPR)-like superfamily protein ORGANELLE TRANSCRIPT PROCESSING 81 0.8 0.31 -0.3
31 AT5G18640 alpha/beta-Hydrolases superfamily protein -0.8 0.31 -0.31
32 AT5G18630 alpha/beta-Hydrolases superfamily protein -0.8 0.32 -0.34
33 AT1G03110 Transducin/WD40 repeat-like superfamily protein AtTRM82, tRNA modification 82 0.8 0.33 -0.3
34 AT2G19740 Ribosomal protein L31e family protein 0.8 0.34 -0.32
35 AT5G53350 CLP protease regulatory subunit X CLP protease regulatory subunit X -0.79 0.33 -0.31
36 AT5G19320 RAN GTPase activating protein 2 RAN GTPase activating protein 2 0.79 0.31 -0.31
37 AT5G16040 Regulator of chromosome condensation (RCC1) family protein 0.79 0.32 -0.31
38 AT3G12520 sulfate transporter 4;2 sulfate transporter 4;2 -0.79 0.32 -0.32
39 AT3G11880 Protein of unknown function DUF2359, transmembrane -0.79 0.31 -0.31
40 AT2G18480 Major facilitator superfamily protein -0.79 0.32 -0.31
41 AT4G11960 PGR5-like B PGR5-like B -0.79 0.34 -0.31
42 AT4G18140 SCP1-like small phosphatase 4b SCP1-like small phosphatase 4b -0.79 0.3 -0.3
43 AT1G26440 ureide permease 5 ureide permease 5, UPS5, ureide
permease 5		 -0.79 0.29 -0.29
44 AT4G18070 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G29530.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.79 0.34 -0.32
45 AT5G44320 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)		 0.79 0.32 -0.33
46 AT5G64330 Phototropic-responsive NPH3 family protein JK218, NON-PHOTOTROPIC HYPOCOTYL
3, ROOT PHOTOTROPISM 3		 0.79 0.3 -0.31
47 AT3G11230 Yippee family putative zinc-binding protein -0.79 0.31 -0.31
48 AT3G12860 NOP56-like pre RNA processing ribonucleoprotein 0.79 0.33 -0.3
49 AT1G04970 lipid-binding serum glycoprotein family protein -0.78 0.32 -0.33
50 AT1G36380 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: 23 plant structures; EXPRESSED DURING: 15 growth
stages; Has 14 Blast hits to 14 proteins in 6 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.78 0.31 -0.31
51 AT5G59180 DNA-directed RNA polymerase II NRPB7 0.78 0.31 -0.33
52 AT5G05210 Surfeit locus protein 6 0.78 0.31 -0.31
53 AT3G15460 Ribosomal RNA processing Brix domain protein 0.78 0.3 -0.3
54 AT3G56150 eukaryotic translation initiation factor 3C ATEIF3C-1, ATTIF3C1, eukaryotic
translation initiation factor 3C,
EIF3C-1, TIF3C1		 0.78 0.34 -0.3
55 AT4G20930 6-phosphogluconate dehydrogenase family protein -0.78 0.34 -0.3
56 AT5G19570 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0546
(InterPro:IPR018908); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 0.78 0.33 -0.32
57 AT2G36690 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.78 0.29 -0.32
58 AT1G22270 Trm112p-like protein 0.78 0.32 -0.32
59 AT1G62010 Mitochondrial transcription termination factor family
protein		 0.78 0.3 -0.32
60 AT1G16280 RNA helicase 36 Arabidopsis thaliana RNA helicase
36, RNA helicase 36, SLOW WALKER 3		 0.78 0.32 -0.32
61 AT2G22400 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.77 0.32 -0.31
62 AT4G10760 mRNAadenosine methylase EMBRYO DEFECTIVE 1706,
mRNAadenosine methylase		 0.77 0.32 -0.3
63 AT5G22310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G11590.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.77 0.32 -0.32
64 AT4G02220 zinc finger (MYND type) family protein / programmed cell
death 2 C-terminal domain-containing protein		 0.77 0.31 -0.32
65 AT1G10840 translation initiation factor 3 subunit H1 translation initiation factor 3
subunit H1		 0.77 0.32 -0.32
66 AT5G02500 heat shock cognate protein 70-1 ARABIDOPSIS THALIANA HEAT SHOCK
COGNATE PROTEIN 70-1, AtHsp70-1,
HEAT SHOCK COGNATE PROTEIN 70,
heat shock cognate protein 70-1,
HEAT SHOCK PROTEIN 70-1		 0.77 0.32 -0.32
67 AT1G69950 transposable element gene 0.77 0.33 -0.29
68 AT4G39280 phenylalanyl-tRNA synthetase, putative /
phenylalanine--tRNA ligase, putative		 0.77 0.31 -0.32
69 AT1G09830 Glycinamide ribonucleotide (GAR) synthetase 0.77 0.33 -0.32
70 AT2G44510 CDK inhibitor P21 binding protein 0.77 0.29 -0.31
71 AT2G04690 Pyridoxamine 5'-phosphate oxidase family protein -0.77 0.3 -0.3
72 AT2G01860 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 975 0.77 0.3 -0.31
73 AT3G62010 unknown protein; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; Has 553 Blast hits to 216 proteins in 93
species: Archae - 0; Bacteria - 124; Metazoa - 193; Fungi -
58; Plants - 108; Viruses - 0; Other Eukaryotes - 70
(source: NCBI BLink).		 -0.77 0.32 -0.31
74 AT1G79380 Ca(2)-dependent phospholipid-binding protein (Copine)
family		 -0.76 0.31 -0.32
75 AT1G10590 Nucleic acid-binding, OB-fold-like protein 0.76 0.33 -0.32
76 AT5G39900 Small GTP-binding protein 0.76 0.32 -0.34
77 AT3G16230 Predicted eukaryotic LigT -0.76 0.31 -0.31
78 AT1G20560 acyl activating enzyme 1 acyl activating enzyme 1 -0.76 0.33 -0.3
79 AT1G26670 Vesicle transport v-SNARE family protein ATVTI12, VESICAL TRANSPORT V-SNARE
12, VTI1B		 -0.76 0.32 -0.31
80 AT5G14920 Gibberellin-regulated family protein 0.76 0.29 -0.32
81 AT5G13760 Plasma-membrane choline transporter family protein -0.76 0.33 -0.33
82 AT3G57490 Ribosomal protein S5 family protein 0.76 0.29 -0.33
83 AT5G51280 DEAD-box protein abstrakt, putative 0.76 0.33 -0.3
84 AT2G21790 ribonucleotide reductase 1 RIBONUCLEOTIDE REDUCTASE LARGE
SUBUNIT 1, CRINKLY LEAVES 8,
RIBONUCLEOTIDE REDUCTASE 1,
ribonucleotide reductase 1		 0.76 0.31 -0.33
85 AT3G13150 Tetratricopeptide repeat (TPR)-like superfamily protein 0.76 0.33 -0.31
86 AT1G75990 PAM domain (PCI/PINT associated module) protein 0.76 0.31 -0.33
87 AT1G61010 cleavage and polyadenylation specificity factor 73-I cleavage and polyadenylation
specificity factor 73-I		 0.76 0.33 -0.33
88 AT1G24530 Transducin/WD40 repeat-like superfamily protein 0.76 0.32 -0.31
89 AT2G02880 mucin-related 0.76 0.32 -0.33
90 AT4G27620 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G27610.3); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.76 0.32 -0.33
91 AT5G23580 calmodulin-like domain protein kinase 9 ARABIDOPSIS THALIANA
CALMODULIN-LIKE DOMAIN PROTEIN
KINASE 9, ATCPK12, calmodulin-like
domain protein kinase 9,
CALCIUM-DEPENDENT PROTEIN KINASE
12		 -0.75 0.31 -0.33
92 AT3G53950 glyoxal oxidase-related protein -0.75 0.35 -0.3
93 AT1G19640 jasmonic acid carboxyl methyltransferase jasmonic acid carboxyl
methyltransferase		 -0.75 0.32 -0.32
94 AT5G58200 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.75 0.32 -0.3
95 AT5G16800 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.75 0.3 -0.33
96 AT3G14920 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A
protein		 -0.75 0.32 -0.31
97 AT1G58180 beta carbonic anhydrase 6 A. THALIANA BETA CARBONIC
ANHYDRASE 6, beta carbonic
anhydrase 6		 -0.75 0.32 -0.31
98 AT1G53280 Class I glutamine amidotransferase-like superfamily protein DJ-1 homolog B, DJ-1 homolog B -0.75 0.33 -0.31
99 AT3G26100 Regulator of chromosome condensation (RCC1) family protein -0.75 0.32 -0.34
100 AT3G11660 NDR1/HIN1-like 1 NDR1/HIN1-like 1 -0.75 0.29 -0.32
101 AT1G17360 BEST Arabidopsis thaliana protein match is:
COP1-interacting protein-related (TAIR:AT1G72410.1); Has
9949 Blast hits to 7480 proteins in 576 species: Archae -
12; Bacteria - 1007; Metazoa - 3636; Fungi - 982; Plants -
444; Viruses - 50; Other Eukaryotes - 3818 (source: NCBI
BLink).		 -0.74 0.31 -0.31
102 AT1G78490 cytochrome P450, family 708, subfamily A, polypeptide 3 cytochrome P450, family 708,
subfamily A, polypeptide 3		 -0.74 0.3 -0.34
103 AT2G46030 ubiquitin-conjugating enzyme 6 ubiquitin-conjugating enzyme 6 -0.74 0.31 -0.33
104 AT1G30220 inositol transporter 2 ARABIDOPSIS THALIANA INOSITOL
TRANSPORTER 2, inositol
transporter 2		 -0.74 0.31 -0.32
105 AT4G34630 unknown protein; Has 30 Blast hits to 30 proteins in 10
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.74 0.32 -0.32
106 AT1G48430 Dihydroxyacetone kinase -0.73 0.32 -0.34
107 AT4G22260 Alternative oxidase family protein IMMUTANS, IM1 -0.73 0.32 -0.33
108 AT1G74410 RING/U-box superfamily protein -0.72 0.32 -0.3
109 AT1G31170 sulfiredoxin SULFIREDOXIN, sulfiredoxin -0.72 0.3 -0.31
110 AT1G67560 PLAT/LH2 domain-containing lipoxygenase family protein Arabidopsis thaliana lipoxygenase
6, lipoxygenase 6		 -0.72 0.33 -0.33
111 AT1G03290 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G02880.2); Has 13587 Blast
hits to 10183 proteins in 1114 species: Archae - 257;
Bacteria - 2402; Metazoa - 5637; Fungi - 960; Plants - 675;
Viruses - 54; Other Eukaryotes - 3602 (source: NCBI BLink).		 -0.72 0.3 -0.31
112 AT1G19650 Sec14p-like phosphatidylinositol transfer family protein -0.72 0.3 -0.33
113 AT3G28050 nodulin MtN21 /EamA-like transporter family protein -0.72 0.33 -0.32
114 AT3G51895 sulfate transporter 3;1 AST12, sulfate transporter 3;1 -0.72 0.31 -0.33
115 AT4G21790 tobamovirus multiplication 1 ATTOM1, tobamovirus multiplication
1		 -0.72 0.3 -0.34
116 AT3G47960 Major facilitator superfamily protein -0.72 0.32 -0.32
117 AT2G14520 CBS domain-containing protein with a domain of unknown
function (DUF21)		 -0.72 0.31 -0.31
118 AT5G67160 HXXXD-type acyl-transferase family protein ENHANCED PSEUDOMONAS SUSCEPTIBILTY
1		 -0.72 0.32 -0.31
119 AT2G36950 Heavy metal transport/detoxification superfamily protein -0.72 0.32 -0.33
120 AT5G27350 Major facilitator superfamily protein SFP1 -0.71 0.3 -0.28
121 AT3G49580 response to low sulfur 1 RESPONSE TO LOW SULFUR 1 -0.71 0.33 -0.3
122 AT1G76460 RNA-binding (RRM/RBD/RNP motifs) family protein -0.71 0.29 -0.31
123 AT1G05940 cationic amino acid transporter 9 cationic amino acid transporter 9 -0.71 0.3 -0.31
124 AT2G29590 Thioesterase superfamily protein -0.71 0.33 -0.33
125 AT1G53560 Ribosomal protein L18ae family -0.71 0.31 -0.29
126 AT2G24040 Low temperature and salt responsive protein family -0.71 0.33 -0.32
127 AT1G58200 MSCS-like 3 MSCS-like 3 -0.7 0.31 -0.33
128 AT4G02120 CTP synthase family protein -0.7 0.3 -0.29
129 AT4G11570 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.7 0.33 -0.35
130 AT5G43600 ureidoglycolate amidohydrolase ARABIDOPSIS THALIANA ALLANTOATE
AMIDOHYDROLASE 2, ureidoglycolate
amidohydrolase		 -0.7 0.32 -0.31
131 AT5G64900 precursor of peptide 1 ARABIDOPSIS THALIANA PEPTIDE 1,
PEPTIDE 1, precursor of peptide 1		 -0.69 0.31 -0.31
132 AT4G35600 Protein kinase superfamily protein CAST AWAY, CONNEXIN 32, kinase 4 -0.69 0.33 -0.32
133 AT1G04440 casein kinase like 13 casein kinase like 13 -0.69 0.31 -0.29
134 AT3G27110 Peptidase family M48 family protein -0.69 0.31 -0.33
135 AT5G24420 6-phosphogluconolactonase 5 6-phosphogluconolactonase 5 -0.69 0.31 -0.3
136 AT5G48850 Tetratricopeptide repeat (TPR)-like superfamily protein SULPHUR DEFICIENCY-INDUCED 1 -0.69 0.31 -0.3
137 AT3G59300 Pentatricopeptide repeat (PPR) superfamily protein -0.69 0.32 -0.32
138 AT1G24440 RING/U-box superfamily protein -0.69 0.3 -0.34