AT4G21710 : EMBRYO DEFECTIVE 1989
Query Information
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AGICode AT4G21710
Description DNA-directed RNA polymerase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G21710 DNA-directed RNA polymerase family protein EMBRYO DEFECTIVE 1989, NRPB2, RPB2 1 0.31 -0.32
2 AT1G79630 Protein phosphatase 2C family protein 0.7 0.33 -0.32
3 AT5G62190 DEAD box RNA helicase (PRH75) PRH75 0.68 0.33 -0.33
4 AT1G02840 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34, ATSRP34, SR1,
Serine/Arginine-Rich Protein
Splicing Factor 34, SRP34		 0.67 0.32 -0.33
5 AT1G09280 CONTAINS InterPro DOMAIN/s: Rhodanese-like
(InterPro:IPR001763), Serine hydrolase
(InterPro:IPR005645); BEST Arabidopsis thaliana protein
match is: Rhodanese/Cell cycle control phosphatase
superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits
to 5912 proteins in 1592 species: Archae - 0; Bacteria -
2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses -
0; Other Eukaryotes - 2186 (source: NCBI BLink).		 0.67 0.32 -0.32
6 AT4G32910 CONTAINS InterPro DOMAIN/s: Nuclear pore complex protein,
Nucleoporin Nup85-like (InterPro:IPR011502); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.67 0.31 -0.32
7 AT3G43800 glutathione S-transferase tau 27 glutathione S-transferase tau 27,
glutathione S-transferase tau 27		 -0.67 0.33 -0.31
8 AT5G61380 CCT motif -containing response regulator protein APRR1, TIMING OF CAB EXPRESSION 1,
PSEUDO-RESPONSE REGULATOR 1,
TIMING OF CAB EXPRESSION 1		 0.66 0.31 -0.3
9 AT2G21130 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.66 0.32 -0.33
10 AT1G48560 unknown protein; Has 75 Blast hits to 71 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0;
Plants - 69; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.66 0.3 -0.32
11 AT1G11950 Transcription factor jumonji (jmjC) domain-containing
protein		 0.65 0.34 -0.3
12 AT5G17440 LUC7 related protein 0.65 0.29 -0.33
13 AT3G19120 PIF / Ping-Pong family of plant transposases 0.63 0.3 -0.32
14 AT2G27760 tRNAisopentenyltransferase 2 tRNAisopentenyltransferase 2,
IPPT, tRNAisopentenyltransferase 2		 0.63 0.3 -0.32
15 AT4G09140 MUTL-homologue 1 ARABIDOPSIS THALIANA
MUTL-HOMOLOGUE 1, MUTL-homologue 1		 0.63 0.31 -0.33
16 AT2G36930 zinc finger (C2H2 type) family protein 0.63 0.3 -0.31
17 AT5G37710 alpha/beta-Hydrolases superfamily protein 0.63 0.29 -0.33
18 AT2G26470 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF159 (InterPro:IPR003738); Has 3646
Blast hits to 3636 proteins in 1001 species: Archae - 41;
Bacteria - 1922; Metazoa - 142; Fungi - 125; Plants - 44;
Viruses - 14; Other Eukaryotes - 1358 (source: NCBI BLink).		 0.62 0.32 -0.32
19 AT2G02850 plantacyanin plantacyanin 0.62 0.32 -0.3
20 AT4G18260 Cytochrome b561/ferric reductase transmembrane protein
family		 0.62 0.29 -0.31
21 AT2G17410 ARID/BRIGHT DNA-binding domain-containing protein 0.62 0.3 -0.3
22 AT5G26731 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.61 0.3 -0.32
23 AT3G12980 histone acetyltransferase of the CBP family 5 HISTONE ACETYLTRANSFERASE OF THE
CBP FAMILY 5, histone
acetyltransferase of the CBP
family 5		 0.61 0.35 -0.31
24 AT3G18030 HAL3-like protein A ATHAL3, ARABIDOPSIS THALIANA
HAL3-LIKE PROTEIN A, HALOTOLERANCE
DETERMINANT 3, HAL3-like protein A		 0.61 0.34 -0.33
25 AT5G06280 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.61 0.31 -0.32
26 AT2G02100 low-molecular-weight cysteine-rich 69 low-molecular-weight cysteine-rich
69, PDF2.2		 0.6 0.34 -0.3
27 AT1G33790 jacalin lectin family protein 0.6 0.31 -0.33
28 AT2G36350 Protein kinase superfamily protein 0.6 0.33 -0.31
29 AT4G28770 Tetraspanin family protein -0.6 0.34 -0.32
30 AT1G32300 D-arabinono-1,4-lactone oxidase family protein -0.6 0.33 -0.31
31 AT2G02160 CCCH-type zinc finger family protein 0.6 0.33 -0.32
32 AT5G46840 RNA-binding (RRM/RBD/RNP motifs) family protein 0.6 0.32 -0.33
33 AT1G75660 5'-3' exoribonuclease 3 5'-3' EXORIBONUCLEASE 3, 5'-3'
exoribonuclease 3		 0.6 0.32 -0.3
34 AT4G37580 Acyl-CoA N-acyltransferases (NAT) superfamily protein CONSTITUTIVE PHOTOMORPHOGENIC 3,
HOOKLESS 1, UNUSUAL SUGAR RESPONSE
2		 0.6 0.3 -0.31
35 AT2G40650 PRP38 family protein 0.6 0.32 -0.3
36 AT2G41620 Nucleoporin interacting component (Nup93/Nic96-like) family
protein		 0.59 0.31 -0.32
37 AT1G54050 HSP20-like chaperones superfamily protein -0.59 0.29 -0.31
38 AT1G71350 eukaryotic translation initiation factor SUI1 family
protein		 0.59 0.33 -0.3
39 AT5G21160 LA RNA-binding protein 0.58 0.29 -0.33
40 AT5G05560 E3 ubiquitin ligase, putative EMBRYO DEFECTIVE 2771 0.58 0.32 -0.31
41 AT3G19400 Cysteine proteinases superfamily protein -0.58 0.31 -0.34
42 AT2G02090 SNF2 domain-containing protein / helicase domain-containing
protein		 CHA19, CHROMATIN REMODELING 19,
ETL1		 0.58 0.32 -0.33
43 AT5G23430 Transducin/WD40 repeat-like superfamily protein 0.58 0.3 -0.34
44 AT4G10770 oligopeptide transporter 7 ARABIDOPSIS THALIANA OLIGOPEPTIDE
TRANSPORTER 7, oligopeptide
transporter 7		 -0.58 0.3 -0.31
45 AT1G67640 Transmembrane amino acid transporter family protein -0.58 0.3 -0.3
46 AT4G04830 methionine sulfoxide reductase B5 methionine sulfoxide reductase B5,
methionine sulfoxide reductase B5		 -0.58 0.29 -0.33
47 AT2G02610 Cysteine/Histidine-rich C1 domain family protein -0.58 0.3 -0.3
48 AT3G30180 brassinosteroid-6-oxidase 2 brassinosteroid-6-oxidase 2,
CYP85A2		 0.57 0.29 -0.3
49 AT4G31330 Protein of unknown function, DUF599 -0.57 0.31 -0.32
50 AT2G27360 GDSL-like Lipase/Acylhydrolase superfamily protein -0.57 0.34 -0.33
51 AT2G46630 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; Has
110095 Blast hits to 59224 proteins in 2216 species: Archae
- 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843;
Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876
(source: NCBI BLink).		 -0.57 0.31 -0.32
52 AT5G11930 Thioredoxin superfamily protein -0.57 0.32 -0.3
53 AT1G15920 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.57 0.31 -0.35
54 AT2G25930 hydroxyproline-rich glycoprotein family protein EARLY FLOWERING 3, PYK20 0.57 0.32 -0.33
55 AT1G08190 vacuolar protein sorting 41 ATVAM2, VACUOLAR PROTEIN SORTING
41, VAM2, vacuolar protein sorting
41, ZIGZAG SUPPRESSOR 2		 -0.57 0.3 -0.31
56 AT5G51030 NAD(P)-binding Rossmann-fold superfamily protein -0.56 0.31 -0.33
57 AT1G78260 RNA-binding (RRM/RBD/RNP motifs) family protein -0.56 0.31 -0.31
58 AT4G14660 RNA polymerase Rpb7-like, N-terminal domain NRPE7 0.56 0.3 -0.31
59 AT4G30080 auxin response factor 16 auxin response factor 16 0.56 0.32 -0.33
60 AT5G27000 kinesin 4 kinesin 4, KINESIN-LIKE PROTEIN IN
ARABIDOPSIS THALIANA D		 0.56 0.3 -0.3
61 AT2G33340 MOS4-associated complex 3B MOS4-associated complex 3B 0.56 0.32 -0.31
62 AT3G50850 Putative methyltransferase family protein 0.56 0.3 -0.31
63 AT2G06040 CONTAINS InterPro DOMAIN/s: Leucine-rich repeat,
cysteine-containing subtype (InterPro:IPR006553); BEST
Arabidopsis thaliana protein match is: RNI-like superfamily
protein (TAIR:AT5G21900.1); Has 5028 Blast hits to 2547
proteins in 240 species: Archae - 0; Bacteria - 125;
Metazoa - 2326; Fungi - 765; Plants - 1373; Viruses - 0;
Other Eukaryotes - 439 (source: NCBI BLink).		 0.56 0.3 -0.32
64 AT2G35430 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.56 0.3 -0.3
65 AT5G61340 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26650.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.56 0.29 -0.31
66 AT2G07720 transposable element gene -0.56 0.31 -0.3
67 AT2G35920 RNA helicase family protein 0.55 0.29 -0.29
68 AT5G26330 Cupredoxin superfamily protein -0.55 0.29 -0.32
69 AT3G21090 ABC-2 type transporter family protein ATP-binding cassette G15 0.55 0.3 -0.32
70 AT5G66260 SAUR-like auxin-responsive protein family -0.55 0.31 -0.31
71 AT5G52320 cytochrome P450, family 96, subfamily A, polypeptide 4 cytochrome P450, family 96,
subfamily A, polypeptide 4		 -0.55 0.33 -0.3
72 AT4G35720 Arabidopsis protein of unknown function (DUF241) 0.55 0.31 -0.33
73 AT2G33830 Dormancy/auxin associated family protein 0.54 0.33 -0.29
74 AT3G56060 Glucose-methanol-choline (GMC) oxidoreductase family
protein		 -0.54 0.3 -0.31
75 AT1G33840 Protein of unknown function (DUF567) -0.54 0.33 -0.34
76 AT1G50430 Ergosterol biosynthesis ERG4/ERG24 family DELTA5,7-STEROL DELTA7 REDUCTASE,
DWARF 5, LEPIDA, PARVA, STEROL
DELTA7 REDUCTASE		 -0.54 0.31 -0.31
77 AT4G19600 Cyclin family protein CYCT1;4 0.54 0.29 -0.29
78 AT5G08370 alpha-galactosidase 2 alpha-galactosidase 2,
alpha-galactosidase 2		 -0.54 0.31 -0.31
79 AT2G34490 cytochrome P450, family 710, subfamily A, polypeptide 2 cytochrome P450, family 710,
subfamily A, polypeptide 2		 -0.54 0.3 -0.32
80 AT1G48070 Thioredoxin superfamily protein 0.54 0.31 -0.32
81 AT3G56660 basic region/leucine zipper motif protein 49 basic region/leucine zipper motif
protein 49		 0.53 0.31 -0.31
82 AT1G22460 O-fucosyltransferase family protein -0.53 0.35 -0.32
83 AT5G56600 profilin 3 PROFILIN 3, profilin 3 -0.53 0.32 -0.32
84 AT4G23780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G23770.1); Has 51 Blast hits
to 49 proteins in 22 species: Archae - 0; Bacteria - 9;
Metazoa - 12; Fungi - 0; Plants - 14; Viruses - 2; Other
Eukaryotes - 14 (source: NCBI BLink).		 -0.53 0.33 -0.3
85 AT2G22450 riboflavin biosynthesis protein, putative 0.53 0.33 -0.33
86 AT2G37030 SAUR-like auxin-responsive protein family 0.53 0.33 -0.33
87 AT2G36270 Basic-leucine zipper (bZIP) transcription factor family
protein		 ABA INSENSITIVE 5,
GROWTH-INSENSITIVITY TO ABA 1		 0.52 0.31 -0.32
88 AT4G35940 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G17787.1); Has 45288 Blast
hits to 24095 proteins in 1140 species: Archae - 93;
Bacteria - 2895; Metazoa - 13424; Fungi - 2873; Plants -
1183; Viruses - 123; Other Eukaryotes - 24697 (source: NCBI
BLink).		 0.52 0.32 -0.3
89 AT3G22240 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G22235.2); Has 177 Blast hits
to 177 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.52 0.33 -0.3
90 AT5G08490 Tetratricopeptide repeat (TPR)-like superfamily protein SLOW GROWTH 1 0.52 0.3 -0.32
91 AT5G02000 unknown protein; Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.51 0.32 -0.33
92 AT5G54070 heat shock transcription factor A9 ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR A9, heat
shock transcription factor A9		 -0.51 0.3 -0.3
93 AT5G37210 Cysteine/Histidine-rich C1 domain family protein -0.51 0.31 -0.32
94 AT2G15520 transposable element gene -0.51 0.3 -0.32
95 AT5G22280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G44280.1); Has 82 Blast hits to 82 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.5 0.35 -0.32
96 AT1G72860 Disease resistance protein (TIR-NBS-LRR class) family -0.5 0.33 -0.32
97 AT4G26390 Pyruvate kinase family protein -0.5 0.33 -0.3
98 AT1G35880 unknown protein; Has 251 Blast hits to 234 proteins in 66
species: Archae - 2; Bacteria - 48; Metazoa - 87; Fungi -
9; Plants - 70; Viruses - 0; Other Eukaryotes - 35 (source:
NCBI BLink).		 -0.5 0.33 -0.32
99 AT1G30455 transcription regulators;translation initiation
factors;zinc ion binding;transcription activators		 -0.49 0.32 -0.29
100 AT5G35800 transposable element gene -0.48 0.3 -0.34
101 AT1G42630 transposable element gene -0.48 0.32 -0.31
102 AT1G43650 nodulin MtN21 /EamA-like transporter family protein -0.48 0.32 -0.33
103 AT4G38560 Arabidopsis phospholipase-like protein (PEARLI 4) family -0.48 0.33 -0.32
104 AT1G72890 Disease resistance protein (TIR-NBS class) -0.48 0.29 -0.32
105 AT1G57670 Toll-Interleukin-Resistance (TIR) domain family protein -0.47 0.31 -0.33