AGICode | AT4G21326 |
Description | subtilase 3.12 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G21326 | subtilase 3.12 | subtilase 3.12, subtilase 3.12 | 1 | 0.3 | -0.31 | ||
2 | AT5G24670 | Cytidine/deoxycytidylate deaminase family protein | EMBRYO DEFECTIVE 2820, tRNA adenosine deaminase 3 |
0.76 | 0.32 | -0.31 | ||
3 | AT5G08210 | MIR834a; miRNA | microRNA834A | 0.72 | 0.33 | -0.34 | ||
4 | AT5G11000 | Plant protein of unknown function (DUF868) | -0.71 | 0.33 | -0.3 | |||
5 | AT5G24350 | CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39 (InterPro:IPR013244); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.69 | 0.32 | -0.33 | |||
6 | AT2G48060 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341 proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa - 318; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). |
0.69 | 0.34 | -0.32 | |||
7 | AT3G42640 | H(+)-ATPase 8 | H(+)-ATPase 8, H(+)-ATPase 8 | 0.69 | 0.32 | -0.31 | ||
8 | AT4G01990 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.69 | 0.3 | -0.31 | |||
9 | AT3G55850 | Amidohydrolase family | LONG AFTER FAR-RED 3, LONG AFTER FAR-RED 3 ISOFORM 1, LAF3 ISOFORM 2 |
0.68 | 0.31 | -0.36 | ||
10 | AT5G24240 | Phosphatidylinositol 3- and 4-kinase ;Ubiquitin family protein |
-0.67 | 0.32 | -0.33 | |||
11 | AT5G16270 | sister chromatid cohesion 1 protein 4 | ARABIDOPSIS HOMOLOG OF RAD21 3, sister chromatid cohesion 1 protein 4 |
0.67 | 0.34 | -0.31 | ||
12 | AT4G37020 | BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.67 | 0.32 | -0.31 | |||
13 | AT1G65570 | Pectin lyase-like superfamily protein | -0.66 | 0.32 | -0.32 | |||
14 | AT3G53090 | ubiquitin-protein ligase 7 | ubiquitin-protein ligase 7 | 0.66 | 0.32 | -0.31 | ||
15 | AT3G01340 | Transducin/WD40 repeat-like superfamily protein | -0.66 | 0.34 | -0.33 | |||
16 | AT2G17975 | zinc finger (Ran-binding) family protein | 0.66 | 0.31 | -0.33 | |||
17 | AT4G23980 | auxin response factor 9 | auxin response factor 9 | 0.66 | 0.31 | -0.32 | ||
18 | AT1G67620 | Lojap-related protein | -0.66 | 0.34 | -0.3 | |||
19 | AT5G57530 | xyloglucan endotransglucosylase/hydrolase 12 | AtXTH12, xyloglucan endotransglucosylase/hydrolase 12 |
-0.66 | 0.32 | -0.29 | ||
20 | AT2G30620 | winged-helix DNA-binding transcription factor family protein |
-0.65 | 0.32 | -0.31 | |||
21 | AT5G25560 | CHY-type/CTCHY-type/RING-type Zinc finger protein | 0.65 | 0.3 | -0.31 | |||
22 | AT1G73250 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1 | ACTIVATING TRANSCRIPTION FACTOR 5, GDP-4-keto-6-deoxymannose-3,5-epim erase-4-reductase 1 |
-0.65 | 0.34 | -0.32 | ||
23 | AT3G46030 | Histone superfamily protein | HTB11 | -0.65 | 0.33 | -0.32 | ||
24 | AT5G20450 | CONTAINS InterPro DOMAIN/s: Dilute (InterPro:IPR002710); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT5G20490.2); Has 1723 Blast hits to 1458 proteins in 355 species: Archae - 28; Bacteria - 353; Metazoa - 453; Fungi - 121; Plants - 353; Viruses - 3; Other Eukaryotes - 412 (source: NCBI BLink). |
0.65 | 0.33 | -0.34 | |||
25 | AT5G14240 | Thioredoxin superfamily protein | -0.64 | 0.31 | -0.35 | |||
26 | AT1G15750 | Transducin family protein / WD-40 repeat family protein | TOPLESS, WUS-INTERACTING PROTEIN 1 | 0.64 | 0.31 | -0.32 | ||
27 | AT3G10720 | Plant invertase/pectin methylesterase inhibitor superfamily | -0.64 | 0.3 | -0.33 | |||
28 | AT1G55660 | FBD, F-box and Leucine Rich Repeat domains containing protein |
-0.64 | 0.3 | -0.31 | |||
29 | AT3G19610 | Plant protein of unknown function (DUF936) | -0.64 | 0.31 | -0.3 | |||
30 | AT1G10630 | ADP-ribosylation factor A1F | ADP-ribosylation factor A1F, ADP-ribosylation factor A1F |
-0.64 | 0.33 | -0.33 | ||
31 | AT1G07020 | unknown protein; Has 39 Blast hits to 39 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 3; Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.63 | 0.27 | -0.31 | |||
32 | AT1G60490 | vacuolar protein sorting 34 | ATVPS34, PHOSPATIDYLINOSITOL 3-KINASE, vacuolar protein sorting 34 |
0.63 | 0.33 | -0.31 | ||
33 | AT5G46300 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.63 | 0.31 | -0.31 | |||
34 | AT5G26980 | syntaxin of plants 41 | ATSYP41, ATTLG2A, syntaxin of plants 41 |
0.63 | 0.31 | -0.33 | ||
35 | AT5G56320 | expansin A14 | ATEXP14, expansin A14, ATHEXP ALPHA 1.5, EXPANSIN 14, expansin A14 |
-0.63 | 0.31 | -0.32 | ||
36 | AT3G17090 | Protein phosphatase 2C family protein | -0.63 | 0.31 | -0.31 | |||
37 | AT4G22300 | carboxylesterases | SUPPRESSOR OF AVRBST-ELICITED RESISTANCE 1 |
-0.62 | 0.29 | -0.31 | ||
38 | AT3G06190 | BTB-POZ and MATH domain 2 | BTB-POZ AND MATH DOMAIN 2, BTB-POZ and MATH domain 2 |
-0.62 | 0.32 | -0.32 | ||
39 | AT3G24340 | chromatin remodeling 40 | chromatin remodeling 40 | 0.62 | 0.29 | -0.29 | ||
40 | AT3G56800 | calmodulin 3 | CALMODULIN 3, calmodulin 3 | -0.62 | 0.33 | -0.31 | ||
41 | AT4G00300 | fringe-related protein | -0.62 | 0.33 | -0.3 | |||
42 | AT1G10430 | protein phosphatase 2A-2 | protein phosphatase 2A-2 | -0.62 | 0.3 | -0.31 | ||
43 | AT1G13540 | Protein of unknown function (DUF1262) | -0.62 | 0.33 | -0.33 | |||
44 | AT3G50010 | Cysteine/Histidine-rich C1 domain family protein | -0.62 | 0.31 | -0.31 | |||
45 | AT5G24150 | FAD/NAD(P)-binding oxidoreductase family protein | SQUALENE MONOOXYGENASE 5, SQP1 | 0.62 | 0.32 | -0.29 | ||
46 | AT3G14570 | glucan synthase-like 4 | glucan synthase-like 4, atgsl4, gsl04, glucan synthase-like 4 |
0.62 | 0.32 | -0.29 | ||
47 | AT3G43760 | transposable element gene | 0.62 | 0.33 | -0.31 | |||
48 | AT4G17640 | casein kinase II beta chain 2 | casein kinase II beta chain 2 | -0.62 | 0.31 | -0.3 | ||
49 | AT1G60260 | beta glucosidase 5 | beta glucosidase 5 | 0.62 | 0.31 | -0.35 | ||
50 | AT1G29820 | Magnesium transporter CorA-like family protein | -0.61 | 0.32 | -0.31 | |||
51 | AT4G00900 | ER-type Ca2+-ATPase 2 | ARABIDOPSIS THALIANA ER-TYPE CA2+-ATPASE 2, ER-type Ca2+-ATPase 2 |
0.61 | 0.32 | -0.3 | ||
52 | AT1G03350 | BSD domain-containing protein | -0.61 | 0.32 | -0.31 | |||
53 | AT1G51430 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28370.1); Has 13 Blast hits to 13 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.61 | 0.33 | -0.31 | |||
54 | AT2G46930 | Pectinacetylesterase family protein | -0.61 | 0.33 | -0.3 | |||
55 | AT1G68100 | ZIP metal ion transporter family | IAA-ALANINE RESISTANT 1 | -0.61 | 0.32 | -0.33 | ||
56 | AT3G29300 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; Has 451 Blast hits to 349 proteins in 91 species: Archae - 0; Bacteria - 85; Metazoa - 81; Fungi - 88; Plants - 18; Viruses - 1; Other Eukaryotes - 178 (source: NCBI BLink). |
-0.61 | 0.31 | -0.31 | |||
57 | AT4G31280 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.61 | 0.32 | -0.35 | |||
58 | AT4G22330 | Alkaline phytoceramidase (aPHC) | ATCES1 | -0.61 | 0.33 | -0.33 | ||
59 | AT2G17230 | EXORDIUM like 5 | EXORDIUM like 5 | -0.61 | 0.31 | -0.3 | ||
60 | AT2G44360 | unknown protein; Has 23 Blast hits to 23 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.61 | 0.31 | -0.31 | |||
61 | AT4G00040 | Chalcone and stilbene synthase family protein | 0.6 | 0.32 | -0.32 | |||
62 | AT5G64530 | xylem NAC domain 1 | Arabidopsis NAC domain containing protein 104, xylem NAC domain 1 |
0.6 | 0.3 | -0.33 | ||
63 | AT2G29700 | pleckstrin homologue 1 | pleckstrin homologue 1, pleckstrin homologue 1 |
-0.6 | 0.33 | -0.31 | ||
64 | AT1G13870 | calmodulin binding;purine nucleotide binding | AtKTI12, DEFORMED ROOTS AND LEAVES 1 |
-0.6 | 0.3 | -0.32 | ||
65 | AT1G67230 | little nuclei1 | CROWDED NUCLEI 1, LITTLE NUCLEI1 | 0.6 | 0.33 | -0.3 | ||
66 | AT1G10200 | GATA type zinc finger transcription factor family protein | WLIM1 | -0.6 | 0.31 | -0.35 | ||
67 | AT1G51300 | alpha/beta-Hydrolases superfamily protein | 0.6 | 0.31 | -0.34 | |||
68 | AT3G56890 | F-box associated ubiquitination effector family protein | 0.6 | 0.32 | -0.3 | |||
69 | AT3G07600 | Heavy metal transport/detoxification superfamily protein | -0.6 | 0.31 | -0.29 | |||
70 | AT3G47800 | Galactose mutarotase-like superfamily protein | -0.59 | 0.3 | -0.31 | |||
71 | AT1G10610 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
0.59 | 0.3 | -0.31 | |||
72 | AT3G23030 | indole-3-acetic acid inducible 2 | indole-3-acetic acid inducible 2 | -0.59 | 0.31 | -0.32 | ||
73 | AT3G23040 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.59 | 0.31 | -0.3 | |||
74 | AT2G22270 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G39860.2); Has 247 Blast hits to 231 proteins in 42 species: Archae - 0; Bacteria - 17; Metazoa - 14; Fungi - 5; Plants - 145; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). |
-0.59 | 0.31 | -0.34 | |||
75 | AT2G11270 | citrate synthase-related | 0.59 | 0.31 | -0.33 | |||
76 | AT2G46560 | transducin family protein / WD-40 repeat family protein | 0.59 | 0.32 | -0.31 | |||
77 | AT1G77080 | K-box region and MADS-box transcription factor family protein |
AGAMOUS-like 27, FLOWERING LOCUS M, MADS AFFECTING FLOWERING 1 |
0.59 | 0.31 | -0.3 | ||
78 | AT5G15230 | GAST1 protein homolog 4 | GAST1 protein homolog 4 | -0.59 | 0.28 | -0.33 | ||
79 | AT4G25020 | D111/G-patch domain-containing protein | 0.59 | 0.3 | -0.33 | |||
80 | AT4G26430 | COP9 signalosome subunit 6B | COP9 signalosome subunit 6B | -0.58 | 0.31 | -0.31 | ||
81 | AT1G44050 | Cysteine/Histidine-rich C1 domain family protein | -0.58 | 0.33 | -0.31 | |||
82 | AT2G16600 | rotamase CYP 3 | rotamase CYP 3 | -0.58 | 0.33 | -0.31 | ||
83 | AT1G63540 | hydroxyproline-rich glycoprotein family protein | -0.58 | 0.32 | -0.32 | |||
84 | AT4G11830 | phospholipase D gamma 2 | phospholipase D gamma 2 | 0.58 | 0.31 | -0.32 | ||
85 | AT1G22870 | Protein kinase family protein with ARM repeat domain | 0.57 | 0.31 | -0.3 | |||
86 | AT5G59380 | methyl-CPG-binding domain 6 | ATMBD6, methyl-CPG-binding domain 6 |
-0.57 | 0.3 | -0.31 | ||
87 | AT5G09390 | CD2-binding protein-related | -0.57 | 0.33 | -0.31 | |||
88 | AT4G11840 | phospholipase D gamma 3 | phospholipase D gamma 3 | 0.57 | 0.31 | -0.31 | ||
89 | AT1G48260 | CBL-interacting protein kinase 17 | CBL-interacting protein kinase 17, SNF1-RELATED PROTEIN KINASE 3.21 |
0.57 | 0.32 | -0.3 | ||
90 | AT5G53670 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.57 | 0.31 | -0.32 | |||
91 | AT2G24950 | Protein of Unknown Function (DUF239) | -0.57 | 0.31 | -0.32 | |||
92 | AT5G08335 | Isoprenylcysteine carboxyl methyltransferase (ICMT) family | ARABIDOPSIS THALIANA ISOPRENYL CYSTEINE METHYLTRANSFERASE B, ATSTE14B, ISOPRENYL CYSTEINE METHYLTRANSFERASE B |
-0.57 | 0.3 | -0.34 | ||
93 | AT4G02430 | RNA-binding (RRM/RBD/RNP motifs) family protein | Serine/Arginine-Rich Protein Splicing Factor 34b, Serine/Arginine-Rich Protein Splicing Factor 34b |
0.57 | 0.29 | -0.31 | ||
94 | AT1G65370 | TRAF-like family protein | 0.57 | 0.31 | -0.31 | |||
95 | AT1G15220 | cytochrome c biogenesis protein family | ATCCMH, CCMH | -0.56 | 0.31 | -0.3 | ||
96 | AT1G23520 | Domain of unknown function (DUF220) | 0.56 | 0.33 | -0.32 | |||
97 | AT1G18290 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: root; Has 94 Blast hits to 94 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.35 | -0.33 | |||
98 | AT4G01700 | Chitinase family protein | -0.56 | 0.29 | -0.28 | |||
99 | AT1G67865 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67860.1); Has 13 Blast hits to 13 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.56 | 0.31 | -0.32 | |||
100 | AT3G02770 | Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase |
-0.56 | 0.31 | -0.33 | |||
101 | AT5G35670 | IQ-domain 33 | IQ-domain 33 | 0.56 | 0.32 | -0.34 | ||
102 | AT1G36940 | unknown protein; Has 21 Blast hits to 21 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.32 | -0.33 | |||
103 | AT5G23150 | Tudor/PWWP/MBT domain-containing protein | ENHANCER OF AG-4 2 | 0.56 | 0.32 | -0.3 | ||
104 | AT1G61620 | phosphoinositide binding | -0.56 | 0.33 | -0.32 | |||
105 | AT2G44240 | Protein of Unknown Function (DUF239) | -0.56 | 0.31 | -0.31 | |||
106 | AT1G17370 | oligouridylate binding protein 1B | oligouridylate binding protein 1B | -0.56 | 0.31 | -0.3 | ||
107 | AT1G49880 | Erv1/Alr family protein | AtErv1, EMBRYO DEFECTIVE 3106, Erv1 |
-0.56 | 0.32 | -0.31 | ||
108 | AT4G24170 | ATP binding microtubule motor family protein | 0.55 | 0.32 | -0.31 | |||
109 | AT5G57670 | Protein kinase superfamily protein | 0.55 | 0.31 | -0.31 | |||
110 | AT5G05310 | TLC ATP/ADP transporter | 0.55 | 0.3 | -0.31 | |||
111 | AT3G05830 | Encodes alpha-helical IF (intermediate filament)-like protein. |
0.55 | 0.29 | -0.32 | |||
112 | AT4G38120 | ARM repeat superfamily protein | 0.55 | 0.3 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
113 | C0038 | 5-(Methylthio)pentylglucosinolate | - | 5-Methylthiopentylglucosinolate | glucosinolate biosynthesis from trihomomethionine | 0.91 | 0.45 | -0.46 | ||
114 | C0016 | S-Adenosylmethionine | S-Adenosyl-L-methionine | S-Adenosyl-L-methionine | ethylene biosynthesis I (plants), scopoletin biosynthesis, quercetinsulphates biosynthesis, siroheme biosynthesis, gibberellin inactivation II (methylation), suberin biosynthesis, volatile benzenoid biosynthesis I (ester formation), S-adenosyl-L-methionine cycle II, methylhalides biosynthesis (plants), S-methylmethionine cycle, ubiquinol-9 biosynthesis (eukaryotic), nicotianamine biosynthesis, methionine biosynthesis II, spermine biosynthesis, choline biosynthesis II, diphthamide biosynthesis, homogalacturonan biosynthesis, phosphatidylcholine biosynthesis II, methylquercetin biosynthesis, plastoquinol biosynthesis, chlorophyllide a biosynthesis I, ferulate and sinapate biosynthesis, ubiquinol-10 biosynthesis (eukaryotic), phenylpropanoid biosynthesis, free phenylpropanoid acid biosynthesis, seleno-amino acid detoxification and volatilization I, plant sterol biosynthesis, lipoate biosynthesis and incorporation I, methyl indole-3-acetate interconversion, cyclopropane and cyclopropene fatty acid biosynthesis, spermidine biosynthesis I, thiamine biosynthesis II, methionine salvage pathway, spermidine hydroxycinnamic acid conjugates biosynthesis, simple coumarins biosynthesis, phosphatidylcholine biosynthesis IV, glutathione-mediated detoxification II, S-adenosyl-L-methionine biosynthesis, methionine degradation I (to homocysteine), phosphatidylcholine biosynthesis III, phylloquinol biosynthesis, choline biosynthesis I, biotin biosynthesis II, vitamin E biosynthesis |
0.69 | 0.47 | -0.43 | ||
115 | C0023 | 1,6-Anhydro-β-glucose | 1,6-Anhydro-β-D-glucose | Levoglucosan | - | -0.63 | 0.48 | -0.45 | ||
116 | C0207 | Phosphatidylglycerol-34:5 | - | - | - | -0.62 | 0.44 | -0.45 | ||
117 | C0211 | PR_MST_2158.8 | - | - | - | 0.61 | 0.46 | -0.44 | ||
118 | C0232 | Shikimic acid | - | Shikimate | phenylpropanoid biosynthesis, chorismate biosynthesis, simple coumarins biosynthesis |
0.6 | 0.31 | -0.31 |