AT4G21610 : lsd one like 2
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G21610
Description lsd one like 2
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G21610 lsd one like 2 lsd one like 2 1 0.33 -0.31
2 AT4G14615 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2346
(InterPro:IPR018625); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G52825.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.79 0.34 -0.32
3 AT4G36360 beta-galactosidase 3 beta-galactosidase 3 -0.75 0.32 -0.29
4 AT4G10180 light-mediated development protein 1 / deetiolated1 (DET1) ATDET1, DE-ETIOLATED 1, FUSCA 2 -0.73 0.34 -0.3
5 AT2G37630 myb-like HTH transcriptional regulator family protein ASYMMETRIC LEAVES 1, MYB DOMAIN
PROTEIN 91, ARABIDOPSIS
PHANTASTICA-LIKE 1, MYB DOMAIN
PROTEIN 91		 -0.73 0.3 -0.34
6 AT3G61250 myb domain protein 17 myb domain protein 17, LATE
MERISTEM IDENTITY2, myb domain
protein 17		 -0.73 0.32 -0.3
7 AT2G26730 Leucine-rich repeat protein kinase family protein -0.72 0.32 -0.31
8 AT4G04890 protodermal factor 2 protodermal factor 2 -0.71 0.33 -0.32
9 AT2G45470 FASCICLIN-like arabinogalactan protein 8 ARABINOGALACTAN PROTEIN 8,
FASCICLIN-like arabinogalactan
protein 8		 -0.71 0.31 -0.33
10 AT3G62920 unknown protein; Has 25 Blast hits to 25 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.71 0.33 -0.31
11 AT3G17750 Protein kinase superfamily protein -0.71 0.32 -0.32
12 AT2G35960 NDR1/HIN1-like 12 NDR1/HIN1-like 12 -0.7 0.32 -0.32
13 AT1G18150 Protein kinase superfamily protein ATMPK8, MPK8 -0.7 0.32 -0.32
14 AT4G34980 subtilisin-like serine protease 2 subtilisin-like serine protease 2 -0.7 0.34 -0.31
15 AT3G56370 Leucine-rich repeat protein kinase family protein -0.7 0.31 -0.34
16 AT2G22840 growth-regulating factor 1 growth-regulating factor 1,
growth-regulating factor 1		 -0.69 0.33 -0.31
17 AT2G29340 NAD-dependent epimerase/dehydratase family protein 0.69 0.31 -0.31
18 AT4G34610 BEL1-like homeodomain 6 BEL1-like homeodomain 6 -0.69 0.31 -0.33
19 AT2G37380 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G39370.1); Has 1284 Blast hits
to 422 proteins in 114 species: Archae - 0; Bacteria - 90;
Metazoa - 125; Fungi - 151; Plants - 136; Viruses - 0;
Other Eukaryotes - 782 (source: NCBI BLink).		 MEMBRANE-ASSOCIATED KINASE
REGULATOR 3		 -0.69 0.31 -0.31
20 AT2G42840 protodermal factor 1 protodermal factor 1 -0.68 0.33 -0.32
21 AT2G18390 ADP-ribosylation factor family protein ARF-LIKE 2, ATARLC1, HALLIMASCH,
TITAN 5		 0.68 0.32 -0.31
22 AT1G73260 kunitz trypsin inhibitor 1 ARABIDOPSIS THALIANA KUNITZ
TRYPSIN INHIBITOR 1, kunitz
trypsin inhibitor 1		 0.68 0.35 -0.31
23 AT4G37750 Integrase-type DNA-binding superfamily protein AINTEGUMENTA, CKC, COMPLEMENTING A
PROTEIN KINASE C MUTANT 1, DRAGON		 -0.68 0.33 -0.32
24 AT5G12850 CCCH-type zinc finger protein with ARM repeat domain -0.68 0.32 -0.3
25 AT2G26330 Leucine-rich receptor-like protein kinase family protein ERECTA, QUANTITATIVE RESISTANCE TO
PLECTOSPHAERELLA 1		 -0.67 0.31 -0.32
26 AT5G65640 beta HLH protein 93 beta HLH protein 93 0.67 0.3 -0.31
27 AT3G15030 TCP family transcription factor 4 maternal effect embryo arrest 35,
TCP family transcription factor 4		 -0.67 0.31 -0.29
28 AT1G22040 Galactose oxidase/kelch repeat superfamily protein 0.67 0.3 -0.31
29 AT2G33630 NAD(P)-binding Rossmann-fold superfamily protein 0.67 0.32 -0.32
30 AT2G35620 Leucine-rich repeat protein kinase family protein FEI 2 -0.67 0.33 -0.35
31 AT2G25570 binding 0.67 0.32 -0.3
32 AT3G49650 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.66 0.32 -0.32
33 AT1G74800 Galactosyltransferase family protein -0.66 0.3 -0.3
34 AT2G46530 auxin response factor 11 auxin response factor 11 -0.65 0.31 -0.29
35 AT5G01790 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 13 growth stages; Has 121 Blast hits to 121
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.65 0.32 -0.33
36 AT4G12010 Disease resistance protein (TIR-NBS-LRR class) family 0.65 0.3 -0.32
37 AT4G32190 Myosin heavy chain-related protein -0.65 0.33 -0.3
38 AT3G13510 Protein of Unknown Function (DUF239) -0.65 0.31 -0.33
39 AT4G18390 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor
2		 TCP2, TEOSINTE BRANCHED 1,
cycloidea and PCF transcription
factor 2		 -0.65 0.32 -0.3
40 AT1G25275 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 18 Blast hits to 18 proteins
in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.64 0.3 -0.33
41 AT1G64330 myosin heavy chain-related -0.64 0.29 -0.32
42 AT5G26230 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 membrane-associated kinase
regulator 1		 -0.64 0.31 -0.33
43 AT4G11650 osmotin 34 osmotin 34, osmotin 34 0.64 0.29 -0.3
44 AT4G15415 Protein phosphatase 2A regulatory B subunit family protein ATB' GAMMA -0.64 0.32 -0.34
45 AT2G35860 FASCICLIN-like arabinogalactan protein 16 precursor FASCICLIN-like arabinogalactan
protein 16 precursor		 -0.64 0.31 -0.3
46 AT1G51805 Leucine-rich repeat protein kinase family protein -0.63 0.32 -0.31
47 AT4G02010 Protein kinase superfamily protein -0.63 0.31 -0.3
48 AT2G43980 inositol 1,3,4-trisphosphate 5/6-kinase 4 inositol 1,3,4-trisphosphate
5/6-kinase 4, inositol
1,3,4-trisphosphate 5/6-kinase 4		 0.63 0.28 -0.33
49 AT1G08130 DNA ligase 1 DNA ligase 1, DNA ligase 1 -0.63 0.31 -0.31
50 AT1G78170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G22250.1); Has 66 Blast hits
to 66 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.31 -0.32
51 AT5G63380 AMP-dependent synthetase and ligase family protein -0.62 0.33 -0.32
52 AT1G22510 RING/U-box protein with domain of unknown function (DUF
1232)		 0.62 0.31 -0.32
53 AT2G21320 B-box zinc finger family protein -0.62 0.31 -0.3
54 AT5G58550 ETO1-like 2 ETO1-like 2 -0.62 0.31 -0.34
55 AT3G08680 Leucine-rich repeat protein kinase family protein -0.62 0.32 -0.31
56 AT3G02240 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 7 0.62 0.32 -0.3
57 AT5G03770 KDO transferase A AtKdtA, KDO transferase A 0.62 0.31 -0.32
58 AT5G53500 Transducin/WD40 repeat-like superfamily protein -0.62 0.34 -0.33
59 AT3G19520 Protein of unknown function (DUF626) 0.62 0.3 -0.34
60 AT5G58490 NAD(P)-binding Rossmann-fold superfamily protein 0.62 0.32 -0.31
61 AT1G80020 transposable element gene -0.62 0.32 -0.31
62 AT2G36830 gamma tonoplast intrinsic protein gamma tonoplast intrinsic protein,
GAMMA TONOPLAST INTRINSIC PROTEIN
1, TONOPLAST INTRINSIC PROTEIN 1;1		 -0.61 0.32 -0.3
63 AT5G03455 Rhodanese/Cell cycle control phosphatase superfamily
protein		 ARSENATE REDUCTASE 2, ARATH;CDC25,
CDC25		 0.61 0.32 -0.33
64 ATCG00720 photosynthetic electron transfer B photosynthetic electron transfer B -0.61 0.33 -0.31
65 AT5G44920 Toll-Interleukin-Resistance (TIR) domain family protein 0.61 0.3 -0.31
66 AT3G13845 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 22 Blast hits to 22
proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.61 0.31 -0.32
67 AT3G24150 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G32295.1); Has 50 Blast hits
to 50 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 7; Fungi - 0; Plants - 41; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 -0.61 0.31 -0.32
68 AT1G63680 acid-amino acid ligases;ligases;ATP binding;ATP
binding;ligases		 ALBINO OR PALE-GREEN 13, ATMURE,
MURE, PIGMENT DEFECTIVE EMBRYO 316		 -0.61 0.3 -0.32
69 AT2G37050 Leucine-rich repeat protein kinase family protein -0.61 0.28 -0.33
70 AT3G42170 BED zinc finger ;hAT family dimerisation domain -0.61 0.29 -0.32
71 AT3G27200 Cupredoxin superfamily protein -0.61 0.3 -0.3
72 AT4G38760 Protein of unknown function (DUF3414) -0.61 0.32 -0.32
73 AT1G74590 glutathione S-transferase TAU 10 GLUTATHIONE S-TRANSFERASE TAU 10,
glutathione S-transferase TAU 10		 0.61 0.32 -0.29
74 AT4G15260 UDP-Glycosyltransferase superfamily protein 0.61 0.32 -0.31
75 AT3G61690 nucleotidyltransferases -0.6 0.32 -0.32
76 AT4G39680 SAP domain-containing protein -0.6 0.36 -0.33
77 AT1G04160 myosin XI B ARABIDOPSIS THALIANA MYOSIN XI B,
MYOSIN XI-8, MYOSIN XI B, myosin
XI B		 -0.6 0.32 -0.29
78 AT3G06220 AP2/B3-like transcriptional factor family protein -0.6 0.32 -0.33
79 AT3G18850 lysophosphatidyl acyltransferase 5 lysophosphatidyl acyltransferase 5 -0.6 0.31 -0.31
80 AT2G40475 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits
to 219 proteins in 41 species: Archae - 0; Bacteria - 4;
Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other
Eukaryotes - 177 (source: NCBI BLink).		 ALTERED SEED GERMINATION 8 -0.6 0.32 -0.29
81 AT1G48120 hydrolases;protein serine/threonine phosphatases -0.6 0.35 -0.31
82 AT2G33570 Domain of unknown function (DUF23) -0.6 0.31 -0.32
83 AT5G14800 pyrroline-5- carboxylate (P5C) reductase AT-P5C1, PYRROLINE-5- CARBOXYLATE
(P5C) REDUCTASE, EMBRYO DEFECTIVE
2772, pyrroline-5- carboxylate
(P5C) reductase		 0.6 0.31 -0.3
84 AT5G58220 transthyretin-like protein allantoin synthase,
transthyretin-like protein		 0.6 0.31 -0.31
85 AT3G17300 unknown protein; Has 48 Blast hits to 48 proteins in 21
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 8 (source:
NCBI BLink).		 At3g17300 0.59 0.3 -0.28
86 AT4G12410 SAUR-like auxin-responsive protein family 0.59 0.28 -0.32
87 AT4G38800 methylthioadenosine nucleosidase 1 ARABIDOPSIS METHYLTHIOADENOSINE
NUCLEOSIDASE 1, ARABIDOPSIS
METHYLTHIOADENOSINE NUCLEOSIDASE
1, METHYLTHIOADENOSINE
NUCLEOSIDASE 1,
methylthioadenosine nucleosidase 1		 0.59 0.32 -0.3
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
88 C0093 Galactinol dihydrate - Galactinol galactosylcyclitol biosynthesis,
stachyose biosynthesis,
ajugose biosynthesis I (galactinol-dependent) 		-0.84 0.44 -0.43 C0093