AT4G20820 : -
Query Information
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AGICode AT4G20820
Description FAD-binding Berberine family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G20820 FAD-binding Berberine family protein 1 0.33 -0.31
2 AT4G31330 Protein of unknown function, DUF599 0.79 0.32 -0.34
3 AT5G23050 acyl-activating enzyme 17 acyl-activating enzyme 17 0.76 0.29 -0.31
4 AT4G33960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 20 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G15830.1); Has 32 Blast hits to 32 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.75 0.32 -0.32
5 AT3G49580 response to low sulfur 1 RESPONSE TO LOW SULFUR 1 0.74 0.3 -0.32
6 AT5G52820 WD-40 repeat family protein / notchless protein, putative -0.74 0.31 -0.29
7 AT1G53035 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G15358.1); Has 49 Blast hits to 49 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.73 0.32 -0.32
8 AT1G04770 Tetratricopeptide repeat (TPR)-like superfamily protein 0.73 0.33 -0.3
9 AT3G19000 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.73 0.31 -0.33
10 AT5G48850 Tetratricopeptide repeat (TPR)-like superfamily protein SULPHUR DEFICIENCY-INDUCED 1 0.72 0.3 -0.32
11 AT3G12270 protein arginine methyltransferase 3 ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 3,
protein arginine methyltransferase
3		 -0.72 0.31 -0.32
12 AT4G29510 arginine methyltransferase 11 ARABIDOPSIS THALIANA ARGININE
METHYLTRANSFERASE 11, ARABIDOPSIS
THALIANA PROTEIN ARGININE
METHYLTRANSFERASE 1B, arginine
methyltransferase 11, PROTEIN
ARGININE METHYLTRANSFERASE 1B		 -0.72 0.31 -0.3
13 AT4G23540 ARM repeat superfamily protein -0.72 0.3 -0.32
14 AT1G06720 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.71 0.33 -0.32
15 AT1G03530 nuclear assembly factor 1 ATNAF1, nuclear assembly factor 1 -0.7 0.32 -0.31
16 AT3G15760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G52565.1); Has 42 Blast hits to 42 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.7 0.31 -0.33
17 AT2G03670 cell division cycle 48B cell division cycle 48B -0.69 0.31 -0.33
18 AT3G62310 RNA helicase family protein -0.69 0.33 -0.32
19 AT1G04510 MOS4-associated complex 3A MOS4-associated complex 3A -0.69 0.31 -0.3
20 AT1G72320 pumilio 23 pumilio 23, pumilio 23 -0.69 0.3 -0.3
21 AT1G52980 GTP-binding family protein nuclear/nucleolar GTPase 2,
nuclear/nucleolar GTPase 2		 -0.69 0.3 -0.33
22 AT4G28200 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA
processing; LOCATED IN: intracellular; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT
helix (InterPro:IPR003107), U3 small nucleolar
RNA-associated protein 6 (InterPro:IPR013949); Has 492
Blast hits to 480 proteins in 206 species: Archae - 0;
Bacteria - 2; Metazoa - 128; Fungi - 191; Plants - 60;
Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).		 -0.69 0.3 -0.31
23 AT3G21540 transducin family protein / WD-40 repeat family protein -0.69 0.31 -0.3
24 AT1G63800 ubiquitin-conjugating enzyme 5 ubiquitin-conjugating enzyme 5 0.69 0.32 -0.33
25 AT1G13120 embryo defective 1745 -0.69 0.32 -0.32
26 AT2G22400 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.68 0.3 -0.32
27 AT2G34750 RNA polymerase I specific transcription initiation factor
RRN3 protein		 -0.68 0.31 -0.32
28 AT1G16280 RNA helicase 36 Arabidopsis thaliana RNA helicase
36, RNA helicase 36, SLOW WALKER 3		 -0.68 0.32 -0.31
29 AT1G04945 HIT-type Zinc finger family protein -0.68 0.32 -0.3
30 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 0.68 0.32 -0.32
31 AT2G44460 beta glucosidase 28 beta glucosidase 28 0.68 0.31 -0.31
32 AT1G77990 STAS domain / Sulfate transporter family AST56, SULPHATE TRANSPORTER 2;2 0.68 0.33 -0.31
33 AT1G26190 Phosphoribulokinase / Uridine kinase family -0.68 0.32 -0.31
34 AT5G22840 Protein kinase superfamily protein -0.68 0.32 -0.32
35 AT3G55510 Noc2p family REBELOTE -0.68 0.33 -0.29
36 AT5G05210 Surfeit locus protein 6 -0.67 0.32 -0.32
37 AT1G28060 Pre-mRNA-splicing factor 3 -0.67 0.32 -0.33
38 AT2G24500 Zinc finger protein 622 FZF -0.67 0.3 -0.32
39 AT2G13540 ARM repeat superfamily protein ABA HYPERSENSITIVE 1, ATCBP80,
CAP-BINDING PROTEIN 80, ENSALADA		 -0.67 0.31 -0.31
40 AT2G21440 RNA-binding (RRM/RBD/RNP motifs) family protein -0.67 0.31 -0.3
41 AT5G61370 Pentatricopeptide repeat (PPR) superfamily protein -0.67 0.32 -0.33
42 AT1G15440 periodic tryptophan protein 2 (PERIODIC TRYPTOPHAN PROTEIN 2,
periodic tryptophan protein 2		 -0.67 0.31 -0.33
43 AT3G43800 glutathione S-transferase tau 27 glutathione S-transferase tau 27,
glutathione S-transferase tau 27		 0.67 0.33 -0.32
44 AT1G02870 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Ribosome biogenesis protein Nop16
(InterPro:IPR019002); Has 104 Blast hits to 104 proteins in
57 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
63; Plants - 35; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 -0.67 0.3 -0.3
45 AT5G08620 DEA(D/H)-box RNA helicase family protein RNA HELICASE 25, STRESS RESPONSE
SUPPRESSOR 2		 -0.67 0.34 -0.28
46 AT2G36930 zinc finger (C2H2 type) family protein -0.66 0.34 -0.32
47 AT5G59980 Polymerase/histidinol phosphatase-like -0.66 0.33 -0.34
48 AT2G47990 transducin family protein / WD-40 repeat family protein EMBRYO SAC DEVELOPMENT ARREST 13,
EMBRYO SAC DEVELOPMENT ARREST 19,
SLOW WALKER1		 -0.66 0.31 -0.33
49 AT5G42540 exoribonuclease 2 EXORIBONUCLEASE 2, exoribonuclease
2		 -0.66 0.31 -0.32
50 AT3G24080 KRR1 family protein -0.66 0.31 -0.32
51 AT1G63160 replication factor C 2 EMBRYO DEFECTIVE 2811, replication
factor C 2		 -0.66 0.31 -0.3
52 AT1G53200 unknown protein; Has 21 Blast hits to 21 proteins in 9
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.32 -0.31
53 AT1G62740 stress-inducible protein, putative Hop2 -0.65 0.31 -0.31
54 AT4G26600 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.65 0.31 -0.3
55 AT2G24762 glutamine dumper 4 glutamine dumper 4, glutamine
dumper 4		 0.65 0.34 -0.31
56 AT3G15080 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.65 0.32 -0.33
57 AT3G54540 general control non-repressible 4 ATP-binding cassette F4, general
control non-repressible 4, general
control non-repressible 4		 -0.65 0.33 -0.34
58 AT5G17440 LUC7 related protein -0.65 0.33 -0.31
59 AT1G79150 binding -0.65 0.29 -0.3
60 AT4G02400 U3 ribonucleoprotein (Utp) family protein -0.65 0.32 -0.31
61 AT1G69250 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 -0.65 0.31 -0.3
62 AT3G56990 embryo sac development arrest 7 embryo sac development arrest 7 -0.64 0.32 -0.32
63 AT5G01230 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.64 0.32 -0.32
64 AT3G04130 Tetratricopeptide repeat (TPR)-like superfamily protein -0.64 0.31 -0.31
65 AT5G22320 Leucine-rich repeat (LRR) family protein -0.64 0.34 -0.31
66 AT5G18630 alpha/beta-Hydrolases superfamily protein 0.64 0.33 -0.3
67 AT2G43650 Sas10/U3 ribonucleoprotein (Utp) family protein EMBRYO DEFECTIVE 2777 -0.63 0.31 -0.31
68 AT5G48970 Mitochondrial substrate carrier family protein -0.63 0.35 -0.31
69 AT5G64420 DNA polymerase V family -0.63 0.31 -0.31
70 AT2G30160 Mitochondrial substrate carrier family protein -0.63 0.32 -0.32
71 AT5G58370 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.63 0.32 -0.31
72 AT2G40430 CONTAINS InterPro DOMAIN/s: P60-like (InterPro:IPR011687),
Tumour suppressor protein Gltscr2 (InterPro:IPR011211); Has
709 Blast hits to 643 proteins in 201 species: Archae - 0;
Bacteria - 32; Metazoa - 224; Fungi - 154; Plants - 45;
Viruses - 0; Other Eukaryotes - 254 (source: NCBI BLink).		 -0.63 0.33 -0.32
73 AT1G10490 Domain of unknown function (DUF1726) ;Putative ATPase
(DUF699)		 -0.63 0.31 -0.3
74 AT1G31970 DEA(D/H)-box RNA helicase family protein STRESS RESPONSE SUPPRESSOR 1 -0.63 0.31 -0.32
75 AT1G68440 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G25400.2); Has 86 Blast hits
to 86 proteins in 29 species: Archae - 0; Bacteria - 6;
Metazoa - 27; Fungi - 11; Plants - 24; Viruses - 0; Other
Eukaryotes - 18 (source: NCBI BLink).		 0.63 0.31 -0.3
76 AT1G42440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948),
Protein of unknown function DUF663 (InterPro:IPR007034);
BEST Arabidopsis thaliana protein match is: P-loop
containing nucleoside triphosphate hydrolases superfamily
protein (TAIR:AT1G06720.1); Has 2741 Blast hits to 2088
proteins in 291 species: Archae - 2; Bacteria - 131;
Metazoa - 833; Fungi - 650; Plants - 171; Viruses - 49;
Other Eukaryotes - 905 (source: NCBI BLink).		 -0.63 0.31 -0.33
77 AT1G25320 Leucine-rich repeat protein kinase family protein -0.63 0.31 -0.32
78 AT4G04830 methionine sulfoxide reductase B5 methionine sulfoxide reductase B5,
methionine sulfoxide reductase B5		 0.63 0.32 -0.31
79 AT5G23880 cleavage and polyadenylation specificity factor 100 CLEAVAGE AND POLYADENYLATION
SPECIFICITY FACTOR 100, cleavage
and polyadenylation specificity
factor 100, EMBRYO DEFECTIVE 1265,
ENHANCED SILENCING PHENOTYPE 5		 -0.62 0.31 -0.33
80 AT2G17510 ribonuclease II family protein EMBRYO DEFECTIVE 2763 -0.62 0.31 -0.29
81 AT1G06670 nuclear DEIH-boxhelicase nuclear DEIH-boxhelicase -0.62 0.32 -0.34
82 AT5G19430 RING/U-box superfamily protein 0.61 0.33 -0.3
83 AT5G22330 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATTIP49A, RESISTANCE TO
PSEUDOMONAS SYRINGAE PV MACULICOLA
INTERACTOR 1		 -0.61 0.31 -0.33
84 AT1G51610 Cation efflux family protein -0.61 0.34 -0.31
85 AT5G57280 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 root initiation defective 2 -0.61 0.31 -0.32
86 AT1G54380 spliceosome protein-related -0.61 0.31 -0.32
87 AT5G65900 DEA(D/H)-box RNA helicase family protein -0.61 0.32 -0.3
88 AT5G61440 atypical CYS HIS rich thioredoxin 5 atypical CYS HIS rich thioredoxin
5		 0.61 0.32 -0.32
89 AT2G24050 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G2		 -0.61 0.33 -0.33
90 AT2G25970 KH domain-containing protein -0.61 0.32 -0.32
91 AT3G61590 Galactose oxidase/kelch repeat superfamily protein HS, HAWAIIAN SKIRT -0.61 0.3 -0.34
92 AT4G39260 cold, circadian rhythm, and RNA binding 1 GLYCINE-RICH PROTEIN 8, cold,
circadian rhythm, and RNA binding
1, glycine-rich RNA-binding
protein 8, GRP8		 -0.61 0.31 -0.32
93 AT1G49740 PLC-like phosphodiesterases superfamily protein 0.6 0.3 -0.32
94 AT3G13672 TRAF-like superfamily protein 0.6 0.32 -0.31
95 AT5G10960 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.59 0.33 -0.31
96 AT5G35800 transposable element gene 0.58 0.31 -0.3
97 AT2G18670 RING/U-box superfamily protein 0.57 0.33 -0.33
98 AT3G58350 RESTRICTED TEV MOVEMENT 3 RESTRICTED TEV MOVEMENT 3 0.55 0.33 -0.33
99 AT5G58120 Disease resistance protein (TIR-NBS-LRR class) family 0.55 0.32 -0.31
100 AT1G09440 Protein kinase superfamily protein 0.55 0.33 -0.33
101 AT4G09390 transposable element gene 0.53 0.3 -0.32
102 AT1G30455 transcription regulators;translation initiation
factors;zinc ion binding;transcription activators		 0.53 0.32 -0.31
103 AT2G26170 cytochrome P450, family 711, subfamily A, polypeptide 1 cytochrome P450, family 711,
subfamily A, polypeptide 1, MORE
AXILLARY BRANCHES 1		 0.52 0.32 -0.33
104 AT4G23410 tetraspanin5 tetraspanin5 0.52 0.31 -0.33