AT4G20840 : -
Query Information
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AGICode AT4G20840
Description FAD-binding Berberine family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G20840 FAD-binding Berberine family protein 1 0.33 -0.3
2 AT1G23090 sulfate transporter 91 sulfate transporter 91, SULTR3;3 0.74 0.29 -0.32
3 AT3G22750 Protein kinase superfamily protein 0.74 0.33 -0.31
4 AT3G14230 related to AP2 2 related to AP2 2 0.74 0.3 -0.31
5 AT2G42540 cold-regulated 15a COR15, cold-regulated 15a -0.74 0.32 -0.31
6 AT2G24580 FAD-dependent oxidoreductase family protein 0.74 0.31 -0.34
7 AT1G29395 COLD REGULATED 314 INNER MEMBRANE 1 COLD REGULATED 314 THYLAKOID
MEMBRANE 1, COLD REGULATED 314
INNER MEMBRANE 1, cold regulated
414 thylakoid membrane 1		 -0.73 0.32 -0.3
8 AT1G14210 Ribonuclease T2 family protein 0.73 0.33 -0.31
9 AT1G51090 Heavy metal transport/detoxification superfamily protein -0.72 0.31 -0.32
10 AT2G43140 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.71 0.31 -0.33
11 AT4G27730 oligopeptide transporter 1 ARABIDOPSIS THALIANA OLIGOPEPTIDE
TRANSPORTER 6, oligopeptide
transporter 1		 0.71 0.32 -0.33
12 AT4G12390 pectin methylesterase inhibitor 1 pectin methylesterase inhibitor 1 0.71 0.31 -0.3
13 AT3G25540 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 LONGEVITY ASSURANCE GENE 1 0.71 0.32 -0.34
14 AT5G40440 mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase
kinase 3, mitogen-activated
protein kinase kinase 3		 -0.7 0.3 -0.32
15 AT4G21410 cysteine-rich RLK (RECEPTOR-like protein kinase) 29 cysteine-rich RLK (RECEPTOR-like
protein kinase) 29		 0.7 0.33 -0.29
16 AT1G55810 uridine kinase-like 3 uridine kinase-like 3 0.69 0.29 -0.31
17 AT3G24760 Galactose oxidase/kelch repeat superfamily protein -0.69 0.3 -0.28
18 AT5G48370 Thioesterase/thiol ester dehydrase-isomerase superfamily
protein		 -0.69 0.31 -0.33
19 AT1G24530 Transducin/WD40 repeat-like superfamily protein 0.69 0.32 -0.3
20 AT1G65930 cytosolic NADP+-dependent isocitrate dehydrogenase cytosolic NADP+-dependent
isocitrate dehydrogenase		 0.68 0.34 -0.3
21 AT4G31820 Phototropic-responsive NPH3 family protein ENHANCER OF PINOID, MACCHI-BOU 4,
NAKED PINS IN YUC MUTANTS 1		 -0.67 0.3 -0.32
22 AT5G06480 Immunoglobulin E-set superfamily protein -0.66 0.33 -0.33
23 AT5G14640 shaggy-like kinase 13 SHAGGY-LIKE KINASE 13, shaggy-like
kinase 13		 -0.66 0.32 -0.32
24 AT4G15690 Thioredoxin superfamily protein 0.66 0.32 -0.31
25 AT2G42950 Magnesium transporter CorA-like family protein -0.66 0.29 -0.3
26 AT1G21910 Integrase-type DNA-binding superfamily protein dehydration response
element-binding protein 26		 0.65 0.34 -0.31
27 AT3G02910 AIG2-like (avirulence induced gene) family protein 0.65 0.33 -0.31
28 AT5G20250 Raffinose synthase family protein DARK INDUCIBLE 10, raffinose
synthase 6		 0.64 0.33 -0.33
29 AT3G13760 Cysteine/Histidine-rich C1 domain family protein 0.64 0.32 -0.32
30 AT5G14120 Major facilitator superfamily protein 0.63 0.32 -0.31
31 AT1G17470 developmentally regulated G-protein 1 ATDRG, developmentally regulated
G-protein 1, developmentally
regulated G-protein 1		 0.63 0.32 -0.33
32 AT2G16990 Major facilitator superfamily protein -0.63 0.34 -0.32
33 AT5G08360 Protein of unknown function (DUF789) 0.63 0.33 -0.32
34 AT1G22570 Major facilitator superfamily protein 0.63 0.32 -0.31
35 AT1G72430 SAUR-like auxin-responsive protein family 0.63 0.3 -0.31
36 AT3G16800 Protein phosphatase 2C family protein -0.62 0.3 -0.33
37 AT2G42530 cold regulated 15b cold regulated 15b -0.62 0.32 -0.33
38 AT4G21400 cysteine-rich RLK (RECEPTOR-like protein kinase) 28 cysteine-rich RLK (RECEPTOR-like
protein kinase) 28		 0.62 0.32 -0.3
39 AT2G42640 Mitogen activated protein kinase kinase kinase-related -0.62 0.32 -0.32
40 AT4G05390 root FNR 1 root FNR 1, root FNR 1 0.62 0.31 -0.32
41 AT1G02860 SPX (SYG1/Pho81/XPR1) domain-containing protein BENZOIC ACID HYPERSENSITIVE 1,
nitrogen limitation adaptation		 0.62 0.34 -0.31
42 AT1G71880 sucrose-proton symporter 1 ARABIDOPSIS THALIANA
SUCROSE-PROTON SYMPORTER 1,
sucrose-proton symporter 1		 0.62 0.31 -0.33
43 AT5G62730 Major facilitator superfamily protein 0.61 0.32 -0.3
44 AT1G69850 nitrate transporter 1:2 nitrate transporter 1:2, nitrate
transporter 1:2, NTL1		 0.61 0.33 -0.31
45 AT3G61630 cytokinin response factor 6 cytokinin response factor 6 0.61 0.32 -0.31
46 AT5G45880 Pollen Ole e 1 allergen and extensin family protein 0.61 0.28 -0.3
47 AT1G30110 nudix hydrolase homolog 25 nudix hydrolase homolog 25, nudix
hydrolase homolog 25		 0.61 0.32 -0.31
48 AT1G60470 galactinol synthase 4 galactinol synthase 4, galactinol
synthase 4		 -0.61 0.32 -0.32
49 AT4G16570 protein arginine methyltransferase 7 ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 7,
protein arginine methyltransferase
7		 0.61 0.3 -0.32
50 AT2G04795 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G35732.1); Has 18 Blast hits
to 18 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.32 -0.31
51 AT2G19780 Leucine-rich repeat (LRR) family protein -0.6 0.31 -0.31
52 AT2G41700 ATP-binding cassette A1 ATP-binding cassette A1,
Arabidopsis thaliana ATP-binding
cassette A1		 0.6 0.32 -0.32
53 AT4G00390 DNA-binding storekeeper protein-related transcriptional
regulator		 0.6 0.29 -0.29
54 AT5G39850 Ribosomal protein S4 0.6 0.32 -0.31
55 AT2G37740 zinc-finger protein 10 ZINC-FINGER PROTEIN 10,
zinc-finger protein 10		 0.59 0.29 -0.3
56 AT5G55140 ribosomal protein L30 family protein 0.59 0.32 -0.32
57 AT4G15570 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 MAGATAMA 3 0.59 0.32 -0.32
58 AT5G04520 Protein of unknown function DUF455 0.59 0.32 -0.33
59 AT3G22680 RNA-DIRECTED DNA METHYLATION 1 RNA-DIRECTED DNA METHYLATION 1 0.59 0.31 -0.31
60 AT5G47620 RNA-binding (RRM/RBD/RNP motifs) family protein 0.59 0.32 -0.31
61 AT1G55680 Transducin/WD40 repeat-like superfamily protein -0.58 0.34 -0.33
62 AT1G50590 RmlC-like cupins superfamily protein -0.58 0.3 -0.31
63 AT5G20990 molybdopterin biosynthesis CNX1 protein / molybdenum
cofactor biosynthesis enzyme CNX1 (CNX1)		 B73, CHLORATE RESISTANT 6,
CO-FACTOR FOR NITRATE REDUCTASE
AND XANTHINE DEHYDROGENASE,
CO-FACTOR FOR NITRATE REDUCTASE
AND XANTHINE DEHYDROGENASE 1,
SIRTINOL 4		 0.58 0.33 -0.3
64 AT2G18230 pyrophosphorylase 2 pyrophosphorylase 2,
pyrophosphorylase 2		 -0.57 0.32 -0.32
65 AT4G04070 transposable element gene -0.57 0.32 -0.33
66 AT1G02190 Fatty acid hydroxylase superfamily -0.56 0.31 -0.33
67 AT2G30960 unknown protein; Has 4906 Blast hits to 2903 proteins in
334 species: Archae - 5; Bacteria - 381; Metazoa - 1639;
Fungi - 509; Plants - 244; Viruses - 5; Other Eukaryotes -
2123 (source: NCBI BLink).		 -0.55 0.32 -0.31
68 AT5G40560 DegP protease 13 DegP protease 13 -0.55 0.31 -0.32
69 AT2G31450 DNA glycosylase superfamily protein ATNTH1 -0.55 0.32 -0.31
70 AT4G24010 cellulose synthase like G1 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE LIKE G1, cellulose
synthase like G1		 -0.55 0.31 -0.31
71 AT5G44990 Glutathione S-transferase family protein -0.54 0.34 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
72 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		-0.76 0.43 -0.44 C0107
73 C0210 Phytol E-Phytol Phytol chlorophyll a degradation II,
chlorophyll a degradation,
phytol salvage pathway 		-0.72 0.43 -0.44 C0210
74 C0164 MST_1596.8 - - - 0.68 0.45 -0.44
75 C0116 Hydroxylamine - Hydroxylamine - -0.55 0.45 -0.45 C0116