AGICode | AT4G21050 |
Description | Dof-type zinc finger domain-containing protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G21050 | Dof-type zinc finger domain-containing protein | 1 | 0.32 | -0.31 | |||
2 | AT2G25190 | PPPDE putative thiol peptidase family protein | -0.64 | 0.32 | -0.3 | |||
3 | AT4G05340 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.64 | 0.29 | -0.32 | |||
4 | AT2G22320 | unknown protein; Has 7 Blast hits to 7 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.61 | 0.35 | -0.32 | |||
5 | AT5G02920 | F-box/RNI-like superfamily protein | 0.6 | 0.31 | -0.32 | |||
6 | AT4G26880 | Stigma-specific Stig1 family protein | -0.59 | 0.33 | -0.3 | |||
7 | AT5G05710 | Pleckstrin homology (PH) domain superfamily protein | -0.59 | 0.31 | -0.31 | |||
8 | AT2G07040 | Leucine-rich repeat protein kinase family protein | ATPRK2A, PRK2A | -0.59 | 0.32 | -0.31 | ||
9 | AT4G21950 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.31 | -0.3 | |||
10 | AT5G04190 | phytochrome kinase substrate 4 | phytochrome kinase substrate 4 | -0.58 | 0.34 | -0.32 | ||
11 | AT4G23330 | BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A (TAIR:AT4G11420.1); Has 63 Blast hits to 55 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.58 | 0.33 | -0.32 | |||
12 | AT1G73780 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.57 | 0.31 | -0.34 | |||
13 | AT3G25850 | Cysteine/Histidine-rich C1 domain family protein | -0.57 | 0.32 | -0.32 | |||
14 | AT1G36830 | transposable element gene | -0.56 | 0.31 | -0.31 | |||
15 | AT5G18650 | CHY-type/CTCHY-type/RING-type Zinc finger protein | -0.56 | 0.33 | -0.31 | |||
16 | AT4G03760 | transposable element gene | -0.56 | 0.32 | -0.31 | |||
17 | AT3G21860 | SKP1-like 10 | SKP1-like 10, SKP1-like 10 | -0.56 | 0.32 | -0.31 | ||
18 | AT2G33390 | unknown protein; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.31 | -0.32 | |||
19 | AT1G68710 | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein |
0.56 | 0.34 | -0.3 | |||
20 | AT1G77310 | BEST Arabidopsis thaliana protein match is: wound-responsive family protein (TAIR:AT1G21610.1); Has 493 Blast hits to 482 proteins in 163 species: Archae - 0; Bacteria - 100; Metazoa - 172; Fungi - 66; Plants - 65; Viruses - 7; Other Eukaryotes - 83 (source: NCBI BLink). |
0.56 | 0.3 | -0.3 | |||
21 | AT3G14670 | unknown protein; Has 70811 Blast hits to 32163 proteins in 1591 species: Archae - 181; Bacteria - 15342; Metazoa - 24728; Fungi - 6779; Plants - 2998; Viruses - 578; Other Eukaryotes - 20205 (source: NCBI BLink). |
0.55 | 0.3 | -0.31 | |||
22 | AT4G33720 | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein |
-0.55 | 0.3 | -0.33 | |||
23 | AT1G54070 | Dormancy/auxin associated family protein | -0.55 | 0.31 | -0.31 | |||
24 | AT3G14410 | Nucleotide/sugar transporter family protein | -0.55 | 0.32 | -0.31 | |||
25 | AT2G30240 | Cation/hydrogen exchanger family protein | ATCHX13, CATION/H+ EXCHANGER 13 | -0.55 | 0.31 | -0.31 | ||
26 | AT2G24330 | Protein of unknown function (DUF2296) | -0.55 | 0.31 | -0.33 | |||
27 | AT3G12920 | SBP (S-ribonuclease binding protein) family protein | BOI-related gene 3 | -0.54 | 0.31 | -0.32 | ||
28 | AT1G55940 | cytochrome P450, family 708, subfamily A, polypeptide 1 | cytochrome P450, family 708, subfamily A, polypeptide 1 |
0.54 | 0.31 | -0.33 | ||
29 | AT1G18350 | MAP kinase kinase 7 | MAP kinase kinase 7, BUSHY AND DWARF 1, MAP kinase kinase 7, MAP KINASE KINASE7 |
-0.54 | 0.33 | -0.31 | ||
30 | AT3G50730 | Protein kinase superfamily protein | 0.54 | 0.3 | -0.34 | |||
31 | AT2G17430 | Seven transmembrane MLO family protein | ATMLO7, MILDEW RESISTANCE LOCUS O 7, NORTIA |
0.54 | 0.33 | -0.3 | ||
32 | AT5G15440 | EID1-like 1 | EID1-like 1 | -0.54 | 0.32 | -0.3 | ||
33 | AT3G19020 | Leucine-rich repeat (LRR) family protein | -0.53 | 0.31 | -0.32 | |||
34 | AT1G62720 | Pentatricopeptide repeat (PPR-like) superfamily protein | AtNG1, novel gene 1 | 0.53 | 0.3 | -0.3 | ||
35 | AT5G28930 | transposable element gene | 0.53 | 0.33 | -0.33 | |||
36 | AT3G62610 | myb domain protein 11 | myb domain protein 11, myb domain protein 11, PRODUCTION OF FLAVONOL GLYCOSIDES 2 |
0.53 | 0.31 | -0.31 | ||
37 | AT1G55190 | PRA1 (Prenylated rab acceptor) family protein | PRENYLATED RAB ACCEPTOR 1.F2, PRA7 | -0.53 | 0.32 | -0.3 | ||
38 | AT1G75420 | UDP-Glycosyltransferase superfamily protein | -0.53 | 0.31 | -0.31 | |||
39 | AT2G22060 | BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT2G22030.1); Has 148 Blast hits to 148 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 148; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.52 | 0.3 | -0.34 | |||
40 | AT3G26935 | DHHC-type zinc finger family protein | -0.52 | 0.32 | -0.31 | |||
41 | AT2G43220 | Cysteine/Histidine-rich C1 domain family protein | -0.52 | 0.31 | -0.31 | |||
42 | AT5G44230 | Pentatricopeptide repeat (PPR) superfamily protein | -0.51 | 0.31 | -0.32 | |||
43 | AT1G63040 | a pseudogene member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The translated product contains one AP2 domain. There are 17 members in this subfamily including TINY. |
-0.51 | 0.33 | -0.35 | |||
44 | AT5G21040 | F-box protein 2 | F-box protein 2 | -0.51 | 0.31 | -0.33 | ||
45 | AT3G30400 | transposable element gene | -0.51 | 0.33 | -0.33 | |||
46 | AT3G60200 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G44600.1); Has 60 Blast hits to 60 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
-0.51 | 0.31 | -0.33 | |||
47 | AT3G26480 | Transducin family protein / WD-40 repeat family protein | 0.51 | 0.28 | -0.33 | |||
48 | AT2G25800 | Protein of unknown function (DUF810) | -0.51 | 0.31 | -0.31 | |||
49 | AT5G04400 | NAC domain containing protein 77 | NAC domain containing protein 77, NAC domain containing protein 77 |
-0.51 | 0.3 | -0.3 | ||
50 | AT3G45270 | transposable element gene | 0.51 | 0.32 | -0.31 | |||
51 | AT1G21830 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G44608.1); Has 49 Blast hits to 49 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.5 | 0.33 | -0.32 | |||
52 | AT1G61920 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.5 | 0.33 | -0.3 | |||
53 | AT4G15880 | Cysteine proteinases superfamily protein | ATESD4, EARLY IN SHORT DAYS 4 | -0.5 | 0.31 | -0.33 | ||
54 | AT3G15200 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.5 | 0.3 | -0.32 | |||
55 | AT2G18880 | vernalization5/VIN3-like | vernalization5/VIN3-like 2, VIN3-like 3 |
-0.49 | 0.34 | -0.32 | ||
56 | AT1G36000 | LOB domain-containing protein 5 | LOB domain-containing protein 5 | -0.49 | 0.34 | -0.33 | ||
57 | AT3G48950 | Pectin lyase-like superfamily protein | 0.49 | 0.32 | -0.33 | |||
58 | AT1G15360 | Integrase-type DNA-binding superfamily protein | SHINE 1, WAX INDUCER 1 | -0.49 | 0.32 | -0.32 | ||
59 | AT5G63320 | nuclear protein X1 | nuclear protein X1 | -0.49 | 0.36 | -0.31 | ||
60 | AT4G03740 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.49 | 0.32 | -0.34 | |||
61 | AT3G05850 | transposable element gene | -0.48 | 0.33 | -0.33 | |||
62 | AT3G58540 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06190.2); Has 6 Blast hits to 6 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.48 | 0.33 | -0.31 | |||
63 | AT2G04840 | Protein of unknown function (DUF295) | -0.48 | 0.31 | -0.3 | |||
64 | AT2G03740 | late embryogenesis abundant domain-containing protein / LEA domain-containing protein |
-0.48 | 0.32 | -0.31 | |||
65 | AT5G13600 | Phototropic-responsive NPH3 family protein | -0.48 | 0.34 | -0.3 | |||
66 | AT2G33880 | homeobox-3 | homeobox-3, STIMPY, WUSCHEL-RELATED HOMEOBOX 9, WUSCHEL related homeobox 9A |
-0.47 | 0.31 | -0.32 | ||
67 | AT1G61480 | S-locus lectin protein kinase family protein | -0.47 | 0.33 | -0.31 | |||
68 | AT1G07550 | Leucine-rich repeat protein kinase family protein | 0.47 | 0.32 | -0.3 | |||
69 | AT5G10680 | calmodulin-binding protein-related | -0.47 | 0.32 | -0.33 | |||
70 | AT1G52790 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
0.47 | 0.3 | -0.31 | |||
71 | AT3G44180 | syntaxin-related family protein | 0.45 | 0.3 | -0.31 | |||
72 | AT4G39420 | unknown protein; Has 46 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.45 | 0.3 | -0.32 | |||
73 | AT1G46840 | F-box family protein | 0.45 | 0.33 | -0.31 | |||
74 | AT1G48800 | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
0.45 | 0.29 | -0.32 | |||
75 | AT1G54880 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.44 | 0.33 | -0.33 | |||
76 | AT5G37080 | transposable element gene | 0.44 | 0.32 | -0.33 | |||
77 | AT5G60335 | Thioesterase superfamily protein | 0.43 | 0.33 | -0.32 | |||
78 | AT4G31260 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.42 | 0.33 | -0.3 | |||
79 | AT5G39030 | Protein kinase superfamily protein | 0.42 | 0.33 | -0.29 | |||
80 | AT3G19690 | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein |
0.42 | 0.33 | -0.31 | |||
81 | AT3G54570 | Plant calmodulin-binding protein-related | 0.42 | 0.32 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
82 | C0254 | Threonine | D,L-Threonine | L-Threonine | isoleucine biosynthesis I (from threonine), glycine biosynthesis, threonine biosynthesis from homoserine, tRNA charging |
0.59 | 0.32 | -0.3 | ||
83 | C0231 | Serine | D,L-Serine | D-Serine; L-Serine | sphingolipid biosynthesis (plants), folate polyglutamylation, tryptophan biosynthesis, phospholipid biosynthesis II, homocysteine and cysteine interconversion, photorespiration, seleno-amino acid biosynthesis, glycine biosynthesis, tRNA charging, serine racemization, phosphatidylethanolamine biosynthesis I, serine biosynthesis, choline biosynthesis I, cysteine biosynthesis I, folate transformations II |
0.54 | 0.31 | -0.34 |