AT4G20890 : tubulin beta-9 chain
Query Information
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AGICode AT4G20890
Description tubulin beta-9 chain
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G20890 tubulin beta-9 chain tubulin beta-9 chain 1 0.31 -0.31
2 AT3G15460 Ribosomal RNA processing Brix domain protein 0.83 0.34 -0.3
3 AT1G08580 unknown protein; Has 39 Blast hits to 39 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 35; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.82 0.33 -0.3
4 AT3G49990 unknown protein; Has 1524 Blast hits to 1298 proteins in
225 species: Archae - 9; Bacteria - 84; Metazoa - 474;
Fungi - 184; Plants - 98; Viruses - 17; Other Eukaryotes -
658 (source: NCBI BLink).		 0.82 0.3 -0.32
5 AT5G58230 Transducin/WD40 repeat-like superfamily protein ARABIDOPSIS MULTICOPY SUPRESSOR OF
IRA1, MATERNAL EFFECT EMBRYO
ARREST 70, MULTICOPY SUPRESSOR OF
IRA1		 0.82 0.32 -0.32
6 AT2G31360 16:0delta9 desaturase 2 16:0delta9 desaturase 2,
16:0delta9 desaturase 2		 0.81 0.28 -0.32
7 AT4G18070 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G29530.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.81 0.29 -0.33
8 AT2G31710 Vacuolar ATPase assembly integral membrane protein
VMA21-like domain		 0.8 0.32 -0.31
9 AT3G44110 DNAJ homologue 3 ATJ, DNAJ homologue 3, J3 0.79 0.3 -0.3
10 AT5G51180 alpha/beta-Hydrolases superfamily protein 0.79 0.32 -0.3
11 AT4G28480 DNAJ heat shock family protein 0.79 0.3 -0.32
12 AT5G18850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.79 0.32 -0.34
13 AT1G55150 DEA(D/H)-box RNA helicase family protein 0.79 0.29 -0.31
14 AT1G22270 Trm112p-like protein 0.79 0.3 -0.32
15 AT1G32440 plastidial pyruvate kinase 3 plastidial pyruvate kinase 3 0.78 0.32 -0.33
16 AT4G34910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.78 0.3 -0.33
17 AT3G14790 rhamnose biosynthesis 3 ARABIDOPSIS THALIANA RHAMNOSE
BIOSYNTHESIS 3, rhamnose
biosynthesis 3		 0.78 0.3 -0.31
18 AT5G18630 alpha/beta-Hydrolases superfamily protein -0.78 0.31 -0.32
19 AT2G25590 Plant Tudor-like protein -0.77 0.3 -0.31
20 AT3G07170 Sterile alpha motif (SAM) domain-containing protein 0.77 0.32 -0.31
21 AT3G12860 NOP56-like pre RNA processing ribonucleoprotein 0.77 0.32 -0.32
22 AT2G16500 arginine decarboxylase 1 arginine decarboxylase 1, ARGDC,
ARGDC1, SPE1		 0.77 0.29 -0.31
23 AT1G26840 origin recognition complex protein 6 ARABIDOPSIS THALIANA ORIGIN
RECOGNITION COMPLEX PROTEIN 6,
origin recognition complex protein
6		 0.77 0.33 -0.31
24 AT2G44510 CDK inhibitor P21 binding protein 0.77 0.32 -0.31
25 AT3G55620 Translation initiation factor IF6 eukaryotic initiation facor 6A,
embryo defective 1624		 0.76 0.31 -0.32
26 AT5G42420 Nucleotide-sugar transporter family protein 0.76 0.3 -0.32
27 AT5G59180 DNA-directed RNA polymerase II NRPB7 0.76 0.33 -0.32
28 AT1G43860 sequence-specific DNA binding transcription factors 0.76 0.32 -0.31
29 AT5G28150 Plant protein of unknown function (DUF868) 0.76 0.31 -0.33
30 AT5G10010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G64910.1); Has 33260
Blast hits to 16857 proteins in 1270 species: Archae - 88;
Bacteria - 3040; Metazoa - 11915; Fungi - 3137; Plants -
1371; Viruses - 424; Other Eukaryotes - 13285 (source: NCBI
BLink).		 0.76 0.33 -0.32
31 AT4G32400 Mitochondrial substrate carrier family protein ARABIDOPSIS THALIANA BRITTLE 1,
EMBRYO DEFECTIVE 104, EMBRYO
DEFECTIVE 42, SODIUM
HYPERSENSITIVE 1		 0.75 0.31 -0.34
32 AT4G35310 calmodulin-domain protein kinase 5 ATCPK5, calmodulin-domain protein
kinase 5		 0.75 0.3 -0.32
33 AT5G52820 WD-40 repeat family protein / notchless protein, putative 0.75 0.31 -0.29
34 AT3G53500 RNA-binding (RRM/RBD/RNP motifs) family protein with
retrovirus zinc finger-like domain		 arginine/serine-rich zinc
knuckle-containing protein 32,
arginine/serine-rich zinc
knuckle-containing protein 32,
arginine/serine-rich zinc
knuckle-containing protein 32		 0.75 0.3 -0.31
35 AT5G22330 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATTIP49A, RESISTANCE TO
PSEUDOMONAS SYRINGAE PV MACULICOLA
INTERACTOR 1		 0.74 0.32 -0.29
36 AT5G10630 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 0.74 0.31 -0.32
37 AT5G18440 CONTAINS InterPro DOMAIN/s: Nuclear fragile X mental
retardation-interacting protein 1, conserved region
(InterPro:IPR019496); Has 1333 Blast hits to 1211 proteins
in 205 species: Archae - 0; Bacteria - 137; Metazoa - 339;
Fungi - 162; Plants - 70; Viruses - 6; Other Eukaryotes -
619 (source: NCBI BLink).		 AtNUFIP, nuclear FMRP-interacting
protein		 0.74 0.32 -0.31
38 AT3G29360 UDP-glucose 6-dehydrogenase family protein UDP-glucose dehydrogenase 2 0.74 0.31 -0.32
39 AT4G00740 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 QUASIMODO 3 0.74 0.3 -0.33
40 AT4G39260 cold, circadian rhythm, and RNA binding 1 GLYCINE-RICH PROTEIN 8, cold,
circadian rhythm, and RNA binding
1, glycine-rich RNA-binding
protein 8, GRP8		 0.74 0.32 -0.33
41 AT5G62350 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.73 0.34 -0.33
42 AT5G11350 DNAse I-like superfamily protein -0.73 0.32 -0.3
43 AT1G17130 Family of unknown function (DUF572) 0.73 0.31 -0.32
44 AT1G07360 CCCH-type zinc fingerfamily protein with RNA-binding domain MOS4-associated complex subunit 5A 0.73 0.34 -0.32
45 AT5G55610 unknown protein; LOCATED IN: mitochondrion, chloroplast,
plastid, membrane; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.73 0.29 -0.3
46 AT4G37210 Tetratricopeptide repeat (TPR)-like superfamily protein 0.73 0.31 -0.34
47 AT5G16040 Regulator of chromosome condensation (RCC1) family protein 0.73 0.31 -0.29
48 AT1G36310 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.73 0.31 -0.32
49 AT1G53035 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G15358.1); Has 49 Blast hits to 49 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.72 0.32 -0.33
50 AT3G01150 polypyrimidine tract-binding protein 1 POLYPYRIMIDINE TRACT-BINDING
PROTEIN 1, polypyrimidine
tract-binding protein 1		 0.72 0.29 -0.33
51 AT4G33960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 20 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G15830.1); Has 32 Blast hits to 32 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.72 0.32 -0.32
52 AT2G24500 Zinc finger protein 622 FZF 0.72 0.32 -0.32
53 AT3G53520 UDP-glucuronic acid decarboxylase 1 ATUXS1, UDP-glucuronic acid
decarboxylase 1		 0.72 0.31 -0.33
54 AT4G28440 Nucleic acid-binding, OB-fold-like protein 0.72 0.32 -0.3
55 AT5G02270 non-intrinsic ABC protein 9 ATP-binding cassette I20,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN 9, non-intrinsic ABC
protein 9		 0.72 0.32 -0.34
56 AT3G16230 Predicted eukaryotic LigT -0.72 0.32 -0.31
57 AT1G66740 ASF1 like histone chaperone ANTI- SILENCING FUNCTION 1A,
AtSP7, SGA2, SP7		 0.72 0.31 -0.32
58 AT5G44110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATP-binding cassette A21,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN, ATPOP1, POP1		 0.72 0.32 -0.29
59 AT1G51600 ZIM-LIKE 2 GATA TRANSCRIPTION FACTOR 28,
TIFY2A, ZIM-LIKE 2		 0.72 0.31 -0.31
60 AT3G18940 clast3-related 0.71 0.34 -0.32
61 AT1G53500 NAD-dependent epimerase/dehydratase family protein ARABIDOPSIS THALIANA
MUCILAGE-MODIFIED 4, ARABIDOPSIS
THALIANA RHAMNOSE BIOSYNTHESIS 2,
MUCILAGE-MODIFIED 4, RHAMNOSE
BIOSYNTHESIS 2		 0.71 0.3 -0.3
62 AT2G18740 Small nuclear ribonucleoprotein family protein 0.71 0.32 -0.33
63 AT5G56740 histone acetyltransferase of the GNAT family 2 HAC07, HAC7, HAG02, histone
acetyltransferase of the GNAT
family 2		 0.71 0.31 -0.31
64 AT1G19370 unknown protein; LOCATED IN: endoplasmic reticulum;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G75140.1); Has 45 Blast hits to 43
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.71 0.32 -0.31
65 AT3G12130 KH domain-containing protein / zinc finger (CCCH type)
family protein		 0.71 0.31 -0.31
66 AT3G16910 acyl-activating enzyme 7 acyl-activating enzyme 7, ACETATE
NON-UTILIZING 1		 -0.7 0.32 -0.31
67 AT5G37930 Protein with RING/U-box and TRAF-like domains -0.7 0.32 -0.31
68 AT1G80920 Chaperone DnaJ-domain superfamily protein AtJ8, translocon at the outer
envelope membrane of chloroplasts
12, J8, translocon at the outer
envelope membrane of chloroplasts
12		 -0.69 0.31 -0.31
69 AT2G06005 FRIGIDA interacting protein 1 FRIGIDA interacting protein 1 -0.68 0.33 -0.32
70 AT1G01770 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1446 (InterPro:IPR010839); Has 1597
Blast hits to 1509 proteins in 306 species: Archae - 4;
Bacteria - 843; Metazoa - 22; Fungi - 131; Plants - 31;
Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink).		 -0.68 0.31 -0.33
71 AT1G02960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02965.1); Has 83 Blast hits
to 82 proteins in 37 species: Archae - 0; Bacteria - 2;
Metazoa - 20; Fungi - 7; Plants - 29; Viruses - 0; Other
Eukaryotes - 25 (source: NCBI BLink).		 -0.67 0.32 -0.32
72 AT2G25350 Phox (PX) domain-containing protein -0.67 0.3 -0.33
73 AT3G02300 Regulator of chromosome condensation (RCC1) family protein -0.66 0.3 -0.3
74 AT4G18020 CheY-like two-component responsive regulator family protein APRR2, PSEUDO-RESPONSE REGULATOR 2 -0.66 0.32 -0.32
75 AT1G55310 SC35-like splicing factor 33 SC35-LIKE SPLICING FACTOR 33,
SC35-like splicing factor 33,
SC35-LIKE SPLICING FACTOR 33,
SC35-like splicing factor 33		 -0.66 0.34 -0.34
76 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 -0.66 0.32 -0.3
77 AT2G46610 RNA-binding (RRM/RBD/RNP motifs) family protein arginine/serine-rich splicing
factor 31a, arginine/serine-rich
splicing factor 31a		 -0.66 0.31 -0.31
78 AT1G73750 Uncharacterised conserved protein UCP031088, alpha/beta
hydrolase		 -0.65 0.32 -0.31
79 AT5G23800 DOMAIN OF UNKNOWN FUNCTION 724 10 DOMAIN OF UNKNOWN FUNCTION 724 10,
DOMAIN OF UNKNOWN FUNCTION 724 10		 -0.65 0.31 -0.31
80 AT1G48430 Dihydroxyacetone kinase -0.65 0.33 -0.32
81 AT1G30200 F-box family protein -0.65 0.32 -0.31
82 AT1G60260 beta glucosidase 5 beta glucosidase 5 -0.65 0.34 -0.31
83 AT3G28270 Protein of unknown function (DUF677) -0.64 0.29 -0.33
84 AT2G45740 peroxin 11D peroxin 11D -0.64 0.31 -0.33
85 AT3G13672 TRAF-like superfamily protein -0.64 0.32 -0.31
86 AT1G54360 TBP-ASSOCIATED FACTOR 6B TBP-ASSOCIATED FACTOR 6B,
TBP-ASSOCIATED FACTOR 6B1,
TBP-ASSOCIATED FACTOR 6B2,
TBP-associated factor 6B4		 -0.64 0.32 -0.3
87 AT3G59300 Pentatricopeptide repeat (PPR) superfamily protein -0.63 0.32 -0.33
88 AT5G13690 alpha-N-acetylglucosaminidase family / NAGLU family CYCLOPS 1,
N-ACETYL-GLUCOSAMINIDASE		 -0.63 0.31 -0.33
89 AT3G27670 ARM repeat superfamily protein RESURRECTION1 -0.61 0.3 -0.31
90 AT4G01510 Arv1-like protein ARV2 -0.61 0.29 -0.32
91 AT1G54230 Winged helix-turn-helix transcription repressor DNA-binding -0.61 0.3 -0.32
92 AT5G53830 VQ motif-containing protein -0.6 0.33 -0.32
93 AT1G09010 glycoside hydrolase family 2 protein -0.59 0.3 -0.33
94 AT1G04950 TATA BOX ASSOCIATED FACTOR II 59 ATTAF6, EMBRYO DEFECTIVE 2781,
TBP-associated factor 6, TATA BOX
ASSOCIATED FACTOR II 59		 -0.59 0.33 -0.31
95 AT1G03030 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.58 0.32 -0.31