AT4G20910 : CORYMBOSA 2
Query Information
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AGICode AT4G20910
Description double-stranded RNA binding protein-related / DsRBD protein-related
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G20910 double-stranded RNA binding protein-related / DsRBD
protein-related		 CORYMBOSA 2, HUA ENHANCER 1 1 0.31 -0.31
2 AT5G44180 Homeodomain-like transcriptional regulator 0.7 0.32 -0.3
3 AT1G22140 unknown protein; Has 40 Blast hits to 40 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.7 0.31 -0.32
4 AT1G05460 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 SILENCING DEFECTIVE 0.69 0.32 -0.3
5 AT4G00970 cysteine-rich RLK (RECEPTOR-like protein kinase) 41 cysteine-rich RLK (RECEPTOR-like
protein kinase) 41		 0.67 0.28 -0.31
6 AT1G67350 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.66 0.31 -0.31
7 AT5G51880 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.66 0.33 -0.31
8 AT1G72170 Domain of unknown function (DUF543) -0.64 0.32 -0.33
9 AT4G16566 histidine triad nucleotide-binding 4 histidine triad nucleotide-binding
4		 -0.64 0.31 -0.31
10 AT1G63290 Aldolase-type TIM barrel family protein -0.64 0.3 -0.31
11 AT4G29735 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Uncharacterised protein family UPF0197
(InterPro:IPR007915); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.63 0.32 -0.32
12 AT1G14950 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.63 0.31 -0.3
13 AT1G15410 aspartate-glutamate racemase family -0.63 0.3 -0.34
14 AT4G14420 HR-like lesion-inducing protein-related -0.62 0.3 -0.32
15 AT1G22910 RNA-binding (RRM/RBD/RNP motifs) family protein -0.62 0.31 -0.33
16 AT2G45240 methionine aminopeptidase 1A methionine aminopeptidase 1A -0.62 0.34 -0.3
17 AT3G13175 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 18 plant structures;
EXPRESSED DURING: 12 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G16400.1); Has 29 Blast hits to 29 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.31 -0.34
18 AT4G36180 Leucine-rich receptor-like protein kinase family protein 0.61 0.3 -0.32
19 AT1G18600 RHOMBOID-like protein 12 ARABIDOPSIS RHOMBOID-LIKE PROTEIN
12, RHOMBOID-like protein 12		 -0.6 0.32 -0.32
20 AT1G04290 Thioesterase superfamily protein -0.6 0.3 -0.3
21 AT4G00585 unknown protein; Has 47 Blast hits to 47 proteins in 22
species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 7;
Plants - 33; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.6 0.32 -0.31
22 AT5G24170 Got1/Sft2-like vescicle transport protein family -0.6 0.32 -0.33
23 AT2G33470 glycolipid transfer protein 1 ARABIDOPSIS GLYCOLIPID TRANSFER
PROTEIN 1, glycolipid transfer
protein 1		 -0.58 0.31 -0.32
24 AT1G48130 1-cysteine peroxiredoxin 1 1-cysteine peroxiredoxin 1,
1-cysteine peroxiredoxin 1		 0.58 0.32 -0.31
25 AT1G11890 Synaptobrevin family protein SECRETION 22, SECRETION 22 -0.58 0.31 -0.32
26 AT1G47830 SNARE-like superfamily protein -0.58 0.3 -0.32
27 AT4G25590 actin depolymerizing factor 7 actin depolymerizing factor 7 -0.58 0.31 -0.32
28 AT2G16880 Pentatricopeptide repeat (PPR) superfamily protein 0.58 0.3 -0.31
29 AT5G05680 nuclear pore complex protein-related EMBRYO DEFECTIVE 2789, MODIFIER OF
SNC1,7		 0.58 0.31 -0.31
30 AT4G18230 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Oligosaccharide biosynthesis protein Alg14 like
(InterPro:IPR013969); Has 640 Blast hits to 640 proteins in
277 species: Archae - 4; Bacteria - 281; Metazoa - 94;
Fungi - 127; Plants - 57; Viruses - 0; Other Eukaryotes -
77 (source: NCBI BLink).		 -0.58 0.32 -0.32
31 AT1G67950 RNA-binding (RRM/RBD/RNP motifs) family protein -0.58 0.31 -0.33
32 AT5G53340 Galactosyltransferase family protein -0.57 0.33 -0.3
33 AT1G12840 vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit
/ vacuolar proton pump C subunit (DET3)		 ARABIDOPSIS THALIANA VACUOLAR ATP
SYNTHASE SUBUNIT C, DE-ETIOLATED 3		 -0.57 0.32 -0.32
34 AT4G08620 sulphate transporter 1;1 sulphate transporter 1;1 -0.57 0.31 -0.31
35 AT1G50200 Alanyl-tRNA synthetase ACD, Alanyl-tRNA synthetase 0.57 0.31 -0.31
36 AT5G48580 FK506- and rapamycin-binding protein 15 kD-2 FK506- and rapamycin-binding
protein 15 kD-2		 -0.57 0.31 -0.33
37 AT5G32460 Transcriptional factor B3 family protein 0.57 0.31 -0.31
38 AT4G30996 Protein of unknown function (DUF1068) NA(+)- AND K(+)-SENSITIVE 1 -0.56 0.32 -0.34
39 AT2G27950 Ring/U-Box superfamily protein 0.56 0.33 -0.32
40 AT1G26940 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.56 0.31 -0.34
41 AT4G17420 Tryptophan RNA-binding attenuator protein-like -0.56 0.31 -0.33
42 AT3G55020 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.56 0.32 -0.32
43 AT1G22520 Domain of unknown function (DUF543) -0.55 0.31 -0.32
44 AT3G01850 Aldolase-type TIM barrel family protein -0.55 0.31 -0.32
45 AT1G44780 CONTAINS InterPro DOMAIN/s: Histone chaperone domain CHZ
(InterPro:IPR019098); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G08310.1); Has 18105
Blast hits to 11200 proteins in 808 species: Archae - 37;
Bacteria - 1195; Metazoa - 7724; Fungi - 1727; Plants -
674; Viruses - 183; Other Eukaryotes - 6565 (source: NCBI
BLink).		 0.54 0.32 -0.32
46 AT1G77140 vacuolar protein sorting 45 ATVPS45, vacuolar protein sorting
45		 -0.54 0.31 -0.3
47 AT3G02460 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.54 0.31 -0.3
48 AT1G11250 syntaxin of plants 125 ATSYP125, syntaxin of plants 125 -0.54 0.31 -0.33
49 AT5G17560 BolA-like family protein -0.54 0.33 -0.31
50 AT1G63170 Zinc finger, C3HC4 type (RING finger) family protein -0.54 0.32 -0.3
51 AT5G36940 cationic amino acid transporter 3 cationic amino acid transporter 3 -0.54 0.32 -0.32
52 AT1G80940 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.54 0.33 -0.33
53 AT3G42310 unknown protein; Has 66 Blast hits to 66 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0;
Plants - 18; Viruses - 31; Other Eukaryotes - 5 (source:
NCBI BLink).		 0.54 0.3 -0.33
54 AT1G65350 ubiquitin 13 ubiquitin 13 0.54 0.33 -0.33
55 AT2G10640 transposable element gene -0.53 0.31 -0.31
56 AT5G23690 Polynucleotide adenylyltransferase family protein -0.53 0.29 -0.31
57 AT5G26080 proline-rich family protein -0.53 0.32 -0.32
58 AT3G05070 CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18
(InterPro:IPR013169); Has 292 Blast hits to 292 proteins in
153 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi
- 83; Plants - 38; Viruses - 11; Other Eukaryotes - 42
(source: NCBI BLink).		 -0.53 0.31 -0.32
59 AT5G06340 nudix hydrolase homolog 27 nudix hydrolase homolog 27, nudix
hydrolase homolog 27		 -0.53 0.31 -0.31
60 AT3G05710 syntaxin of plants 43 ATSYP43, syntaxin of plants 43 -0.53 0.33 -0.3
61 AT3G60480 unknown protein; Has 17 Blast hits to 17 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.53 0.3 -0.31
62 AT3G21090 ABC-2 type transporter family protein ATP-binding cassette G15 0.53 0.32 -0.32
63 AT3G53040 late embryogenesis abundant protein, putative / LEA
protein, putative		 0.53 0.33 -0.3
64 AT4G31770 debranching enzyme 1 ARABIDOPSIS THALIANA DEBRANCHING
ENZYME 1, debranching enzyme 1		 -0.53 0.33 -0.3
65 AT5G47570 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.52 0.32 -0.34
66 AT2G45640 SIN3 associated polypeptide P18 SIN3 ASSOCIATED POLYPEPTIDE 18,
SIN3 associated polypeptide P18		 -0.52 0.31 -0.31
67 AT5G58782 Undecaprenyl pyrophosphate synthetase family protein -0.52 0.29 -0.32
68 AT1G71440 tubulin folding cofactor E / Pfifferling (PFI) PFIFFERLING, TUBULIN-FOLDING
COFACTOR E		 -0.52 0.34 -0.33
69 AT5G04380 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.52 0.3 -0.32
70 AT4G30970 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.52 0.32 -0.31
71 AT5G40640 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
19 plant structures; EXPRESSED DURING: 7 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G27390.1); Has 104 Blast hits to 102 proteins in
14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi -
0; Plants - 101; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.51 0.33 -0.31
72 AT3G17740 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF1740
(InterPro:IPR013633); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G17712.1); Has 409 Blast
hits to 335 proteins in 133 species: Archae - 1; Bacteria -
0; Metazoa - 140; Fungi - 188; Plants - 42; Viruses - 0;
Other Eukaryotes - 38 (source: NCBI BLink).		 0.51 0.3 -0.31
73 AT2G16640 multimeric translocon complex in the outer envelope
membrane 132		 MULTIMERIC TRANSLOCON COMPLEX IN
THE OUTER ENVELOPE MEMBRANE 132,
multimeric translocon complex in
the outer envelope membrane 132		 0.51 0.31 -0.33
74 AT4G09690 Cysteine/Histidine-rich C1 domain family protein 0.51 0.3 -0.3
75 AT4G03090 sequence-specific DNA binding;sequence-specific DNA binding
transcription factors		 0.5 0.31 -0.32
76 AT1G17810 beta-tonoplast intrinsic protein beta-tonoplast intrinsic protein 0.5 0.31 -0.31
77 AT1G58340 MATE efflux family protein BUSH-AND-CHLOROTIC-DWARF 1, ZF14,
ZRIZI		 0.5 0.32 -0.31
78 AT1G62680 Pentatricopeptide repeat (PPR) superfamily protein 0.49 0.31 -0.3
79 AT4G35290 glutamate receptor 2 ATGLR3.2, ATGLUR2, GLUTAMATE
RECEPTOR 3.2, glutamate receptor 2		 0.49 0.32 -0.34
80 AT3G48030 hypoxia-responsive family protein / zinc finger (C3HC4-type
RING finger) family protein		 0.49 0.3 -0.29
81 AT5G51810 gibberellin 20 oxidase 2 AT2353, ATGA20OX2, gibberellin 20
oxidase 2		 0.48 0.31 -0.33
82 AT1G04150 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 0.48 0.32 -0.3
83 AT4G23840 Leucine-rich repeat (LRR) family protein 0.48 0.31 -0.29
84 AT1G30460 cleavage and polyadenylation specificity factor 30 ARABIDOPSIS THALIANA CLEAVAGE AND
POLYADENYLATION SPECIFICITY FACTOR
30, cleavage and polyadenylation
specificity factor 30		 0.48 0.32 -0.3
85 AT4G08380 Proline-rich extensin-like family protein 0.47 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
86 C0139 Linoleic acid n-cis,cis-9,12-Octadecadienoic acid Linoleate poly-hydroxy fatty acids biosynthesis,
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
crepenynic acid biosynthesis 		0.54 0.31 -0.32 C0139
87 C0148 Methionine D,L-Methionine L-Methionine thiamine biosynthesis II,
S-adenosyl-L-methionine biosynthesis,
S-adenosyl-L-methionine cycle II,
tRNA charging,
methionine degradation II,
ethylene biosynthesis I (plants),
methionine degradation I (to homocysteine),
S-methylmethionine cycle,
methionine salvage pathway,
methionine biosynthesis II,
folate transformations II,
homomethionine biosynthesis,
lipoate biosynthesis and incorporation I,
S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation 		0.52 0.31 -0.3 C0148