AGICode | AT4G21140 |
Description | BEST Arabidopsis thaliana protein match is: copper ion binding (TAIR:AT4G05400.2); Has 41 Blast hits to 41 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G21140 | BEST Arabidopsis thaliana protein match is: copper ion binding (TAIR:AT4G05400.2); Has 41 Blast hits to 41 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
1 | 0.33 | -0.3 | |||
2 | AT3G04600 | Nucleotidylyl transferase superfamily protein | 0.76 | 0.34 | -0.36 | |||
3 | AT3G59020 | ARM repeat superfamily protein | 0.72 | 0.3 | -0.3 | |||
4 | AT4G19210 | RNAse l inhibitor protein 2 | ATP-binding cassette E2, ARABIDOPSIS THALIANA RNASE L INHIBITOR PROTEIN 2, RNAse l inhibitor protein 2 |
0.72 | 0.31 | -0.32 | ||
5 | AT2G41830 | Uncharacterized protein | 0.7 | 0.32 | -0.31 | |||
6 | AT4G31210 | DNA topoisomerase, type IA, core | 0.7 | 0.32 | -0.31 | |||
7 | AT3G07060 | NHL domain-containing protein | embryo defective 1974 | 0.7 | 0.31 | -0.32 | ||
8 | AT1G23280 | MAK16 protein-related | 0.7 | 0.32 | -0.33 | |||
9 | AT4G14500 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
-0.68 | 0.32 | -0.3 | |||
10 | AT1G51310 | transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases |
0.68 | 0.31 | -0.32 | |||
11 | AT2G44300 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.68 | 0.3 | -0.3 | |||
12 | AT1G25350 | glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative |
ovule abortion 9 | 0.67 | 0.3 | -0.31 | ||
13 | AT3G47520 | malate dehydrogenase | malate dehydrogenase, plastidic NAD-dependent malate dehydrogenase |
0.66 | 0.31 | -0.31 | ||
14 | AT1G68990 | male gametophyte defective 3 | male gametophyte defective 3 | 0.66 | 0.32 | -0.32 | ||
15 | AT3G06040 | Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein |
0.65 | 0.31 | -0.33 | |||
16 | AT5G45140 | nuclear RNA polymerase C2 | nuclear RNA polymerase C2 | 0.65 | 0.33 | -0.34 | ||
17 | AT4G17610 | tRNA/rRNA methyltransferase (SpoU) family protein | 0.64 | 0.3 | -0.3 | |||
18 | AT3G19790 | unknown protein; Has 32 Blast hits to 26 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 2; Plants - 14; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
-0.64 | 0.3 | -0.32 | |||
19 | AT5G06190 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G58540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.64 | 0.34 | -0.31 | |||
20 | AT2G40810 | homolog of yeast autophagy 18C | homolog of yeast autophagy 18C, homolog of yeast autophagy 18C |
-0.63 | 0.33 | -0.31 | ||
21 | AT5G65950 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1683, C-terminal (InterPro:IPR012880), Foie gras liver health family 1 (InterPro:IPR021773); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.62 | 0.32 | -0.33 | |||
22 | AT3G29610 | transposable element gene | -0.62 | 0.32 | -0.32 | |||
23 | AT5G35160 | Endomembrane protein 70 protein family | 0.62 | 0.3 | -0.32 | |||
24 | AT4G00940 | Dof-type zinc finger DNA-binding family protein | -0.62 | 0.34 | -0.33 | |||
25 | AT2G35390 | Phosphoribosyltransferase family protein | 0.62 | 0.31 | -0.33 | |||
26 | AT1G79420 | Protein of unknown function (DUF620) | -0.6 | 0.31 | -0.28 | |||
27 | AT5G62610 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.6 | 0.31 | -0.32 | |||
28 | AT1G28240 | Protein of unknown function (DUF616) | 0.59 | 0.3 | -0.32 | |||
29 | AT1G50590 | RmlC-like cupins superfamily protein | -0.59 | 0.32 | -0.31 | |||
30 | AT1G63030 | Integrase-type DNA-binding superfamily protein | DWARF AND DELAYED FLOWERING 2 | -0.59 | 0.32 | -0.32 | ||
31 | AT5G13890 | Family of unknown function (DUF716) | 0.59 | 0.31 | -0.3 | |||
32 | AT2G26110 | Protein of unknown function (DUF761) | -0.59 | 0.31 | -0.3 | |||
33 | AT5G65500 | U-box domain-containing protein kinase family protein | -0.58 | 0.31 | -0.3 | |||
34 | AT1G28330 | dormancy-associated protein-like 1 | DORMANCY-ASSOCIATED PROTEIN 1, dormancy-associated protein-like 1 |
-0.57 | 0.3 | -0.3 | ||
35 | AT4G05070 | Wound-responsive family protein | -0.57 | 0.33 | -0.3 | |||
36 | AT3G49450 | F-box and associated interaction domains-containing protein | -0.56 | 0.31 | -0.31 | |||
37 | AT4G16620 | nodulin MtN21 /EamA-like transporter family protein | -0.56 | 0.3 | -0.32 | |||
38 | AT1G05370 | Sec14p-like phosphatidylinositol transfer family protein | -0.55 | 0.31 | -0.31 | |||
39 | AT3G53350 | ROP interactive partner 4 | ROP interactive partner 4 | -0.55 | 0.31 | -0.29 | ||
40 | AT2G40935 | PLAC8 family protein | -0.55 | 0.33 | -0.35 | |||
41 | AT5G42200 | RING/U-box superfamily protein | -0.55 | 0.31 | -0.3 | |||
42 | AT5G23640 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.54 | 0.34 | -0.32 | |||
43 | AT2G09840 | BEST Arabidopsis thaliana protein match is: nucleic acid binding;zinc ion binding (TAIR:AT2G06904.1); Has 10 Blast hits to 10 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.53 | 0.32 | -0.31 | |||
44 | AT3G11600 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.53 | 0.3 | -0.3 |