AT4G20380 : LESION SIMULATING DISEASE
Query Information
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AGICode AT4G20380
Description LSD1 zinc finger family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G20380 LSD1 zinc finger family protein LESION SIMULATING DISEASE 1 0.32 -0.32
2 AT5G16120 alpha/beta-Hydrolases superfamily protein 0.8 0.31 -0.32
3 AT2G46030 ubiquitin-conjugating enzyme 6 ubiquitin-conjugating enzyme 6 0.79 0.31 -0.32
4 AT1G05840 Eukaryotic aspartyl protease family protein 0.79 0.29 -0.33
5 AT3G17770 Dihydroxyacetone kinase 0.79 0.33 -0.3
6 AT5G19070 SNARE associated Golgi protein family 0.77 0.32 -0.31
7 AT4G33940 RING/U-box superfamily protein 0.77 0.31 -0.3
8 AT3G16180 Major facilitator superfamily protein -0.76 0.3 -0.32
9 AT3G04670 WRKY DNA-binding protein 39 WRKY DNA-BINDING PROTEIN 39, WRKY
DNA-binding protein 39		 0.76 0.33 -0.29
10 AT3G53950 glyoxal oxidase-related protein 0.75 0.31 -0.3
11 AT3G57490 Ribosomal protein S5 family protein -0.75 0.32 -0.32
12 AT3G27230 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.75 0.31 -0.3
13 AT4G25700 beta-hydroxylase 1 B1, BETA CAROTENOID HYDROXYLASE 1,
beta-hydroxylase 1, chy1		 0.75 0.31 -0.33
14 AT3G02340 RING/U-box superfamily protein 0.74 0.32 -0.31
15 AT1G09070 soybean gene regulated by cold-2 SOYBEAN GENE REGULATED BY COLD-2,
soybean gene regulated by cold-2		 0.74 0.33 -0.32
16 AT2G25680 molybdate transporter 1 molybdate transporter 1 -0.74 0.32 -0.32
17 AT3G06780 glycine-rich protein 0.74 0.35 -0.33
18 AT5G61020 evolutionarily conserved C-terminal region 3 evolutionarily conserved
C-terminal region 3		 -0.74 0.33 -0.32
19 AT4G34950 Major facilitator superfamily protein -0.74 0.31 -0.31
20 AT5G44370 phosphate transporter 4;6 phosphate transporter 4;6 -0.73 0.31 -0.31
21 AT1G58200 MSCS-like 3 MSCS-like 3 0.73 0.3 -0.31
22 AT2G37560 origin recognition complex second largest subunit 2 ORIGIN RECOGNITION COMPLEX SECOND
LARGEST SUBUNIT 2, origin
recognition complex second largest
subunit 2		 -0.73 0.34 -0.32
23 AT4G23640 Potassium transporter family protein ATKT3, KUP4, TINY ROOT HAIR 1 -0.73 0.33 -0.29
24 AT1G62422 unknown protein; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G12020.1); Has 87 Blast hits to 86 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.72 0.32 -0.32
25 AT2G02710 PAS/LOV protein B PAS/LOV PROTEIN, PAS/LOV PROTEIN
A, PAS/LOV protein B, PAS/LOV
PROTEIN C		 0.72 0.31 -0.31
26 AT3G26910 hydroxyproline-rich glycoprotein family protein 0.72 0.33 -0.32
27 AT3G19380 plant U-box 25 plant U-box 25 0.72 0.31 -0.32
28 AT5G16800 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.72 0.31 -0.34
29 AT3G49590 Autophagy-related protein 13 autophagy-related 13 0.72 0.31 -0.32
30 AT1G70590 F-box family protein 0.71 0.34 -0.3
31 AT4G26400 RING/U-box superfamily protein 0.71 0.32 -0.32
32 AT2G16430 purple acid phosphatase 10 ATPAP10, purple acid phosphatase
10		 -0.71 0.33 -0.3
33 AT2G31240 Tetratricopeptide repeat (TPR)-like superfamily protein -0.71 0.31 -0.32
34 AT2G04690 Pyridoxamine 5'-phosphate oxidase family protein 0.7 0.34 -0.33
35 AT5G13740 zinc induced facilitator 1 zinc induced facilitator 1 0.7 0.31 -0.3
36 AT1G34130 staurosporin and temperature sensitive 3-like b staurosporin and temperature
sensitive 3-like b		 -0.7 0.31 -0.3
37 AT5G55700 beta-amylase 4 beta-amylase 4, BETA-AMYLASE 6 0.7 0.32 -0.32
38 AT3G44850 Protein kinase superfamily protein -0.7 0.3 -0.32
39 AT2G45170 AUTOPHAGY 8E AUTOPHAGY 8E, AUTOPHAGY 8E 0.7 0.32 -0.33
40 AT1G17145 RING/U-box superfamily protein 0.69 0.3 -0.31
41 AT5G62570 Calmodulin binding protein-like 0.69 0.32 -0.31
42 AT1G76380 DNA-binding bromodomain-containing protein 0.69 0.31 -0.3
43 AT1G01240 unknown protein; INVOLVED IN: N-terminal protein
myristoylation; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 11 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G46550.1); Has 95 Blast hits to 78 proteins in 16
species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 0;
Plants - 80; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.69 0.33 -0.31
44 AT4G25340 FK506 BINDING PROTEIN 53 ATFKBP53, FK506 BINDING PROTEIN 53 -0.69 0.32 -0.3
45 AT2G14290 F-box family protein with a domain of unknown function
(DUF295)		 0.69 0.35 -0.32
46 AT1G63810 CONTAINS InterPro DOMAIN/s: Nrap protein
(InterPro:IPR005554); Has 396 Blast hits to 382 proteins in
182 species: Archae - 3; Bacteria - 2; Metazoa - 142; Fungi
- 146; Plants - 43; Viruses - 0; Other Eukaryotes - 60
(source: NCBI BLink).		 -0.68 0.3 -0.3
47 AT5G49710 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G24590.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 0.68 0.31 -0.34
48 AT1G76930 extensin 4 EXTENSIN 1, extensin 4, extensin
1, extensin 4, OBP3-RESPONSIVE
GENE 5		 -0.68 0.31 -0.31
49 AT3G11730 Ras-related small GTP-binding family protein ATFP8, ARABIDOPSIS THALIANA RAB
GTPASE HOMOLOG D1, RAB GTPASE
HOMOLOG D1		 0.68 0.3 -0.32
50 AT4G05410 Transducin/WD40 repeat-like superfamily protein YAOZHE -0.68 0.31 -0.31
51 AT1G23210 glycosyl hydrolase 9B6 glycosyl hydrolase 9B6, glycosyl
hydrolase 9B6		 -0.68 0.31 -0.32
52 AT5G62540 ubiquitin-conjugating enzyme 3 ubiquitin-conjugating enzyme 3 0.67 0.29 -0.29
53 AT4G25170 Uncharacterised conserved protein (UCP012943) 0.67 0.3 -0.3
54 AT3G10530 Transducin/WD40 repeat-like superfamily protein -0.67 0.32 -0.3
55 AT4G13160 Protein of unknown function, DUF593 0.67 0.33 -0.32
56 AT4G38710 glycine-rich protein -0.67 0.31 -0.3
57 AT5G54720 Ankyrin repeat family protein -0.67 0.32 -0.33
58 AT1G05490 chromatin remodeling 31 chromatin remodeling 31 -0.67 0.31 -0.3
59 AT1G33960 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 AVRRPT2-INDUCED GENE 1 -0.66 0.28 -0.32
60 AT1G43130 like COV 2 like COV 2 0.66 0.34 -0.29
61 AT2G26430 arginine-rich cyclin 1 ARGININE-RICH CYCLIN 1,
arginine-rich cyclin 1		 0.66 0.31 -0.32
62 AT1G08410 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.66 0.33 -0.31
63 AT5G49840 ATP-dependent Clp protease 0.66 0.32 -0.32
64 AT1G13450 Homeodomain-like superfamily protein GT-1 0.66 0.31 -0.32
65 AT3G61600 POZ/BTB containin G-protein 1 POZ/BTB containin G-protein 1,
POZ/BTB containin G-protein 1		 0.66 0.32 -0.32
66 AT5G21060 Glyceraldehyde-3-phosphate dehydrogenase-like family
protein		 0.65 0.33 -0.3
67 AT3G02300 Regulator of chromosome condensation (RCC1) family protein 0.65 0.3 -0.31
68 AT1G44770 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G49710.3); Has 81 Blast hits
to 81 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.28 -0.31
69 AT5G53110 RING/U-box superfamily protein -0.65 0.3 -0.31
70 AT3G06380 tubby-like protein 9 tubby-like protein 9, tubby-like
protein 9		 0.65 0.33 -0.32
71 AT3G57940 Domain of unknown function (DUF1726) ;Putative ATPase
(DUF699)		 -0.65 0.33 -0.3
72 AT5G54910 DEA(D/H)-box RNA helicase family protein -0.65 0.32 -0.3
73 AT3G01160 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cytosol, nucleus;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: NUC153
(InterPro:IPR012580); Has 36638 Blast hits to 21323
proteins in 1057 species: Archae - 109; Bacteria - 2369;
Metazoa - 13796; Fungi - 4858; Plants - 1657; Viruses -
489; Other Eukaryotes - 13360 (source: NCBI BLink).		 -0.65 0.32 -0.32
74 AT1G72440 CCAAT-binding factor embryo sac development arrest 25,
SLOW WALKER2		 -0.65 0.32 -0.3
75 AT3G55150 exocyst subunit exo70 family protein H1 exocyst subunit exo70 family
protein H1, exocyst subunit exo70
family protein H1		 -0.65 0.31 -0.31
76 AT1G62040 Ubiquitin-like superfamily protein autophagy 8c 0.65 0.32 -0.33
77 AT2G29760 Tetratricopeptide repeat (TPR)-like superfamily protein ORGANELLE TRANSCRIPT PROCESSING 81 -0.65 0.31 -0.32
78 AT1G30240 FUNCTIONS IN: binding; INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; EXPRESSED
IN: 21 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold
(InterPro:IPR016024); Has 165 Blast hits to 164 proteins in
73 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi -
68; Plants - 46; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.65 0.32 -0.32
79 AT3G23630 isopentenyltransferase 7 ARABIDOPSIS THALIANA
ISOPENTENYLTRANSFERASE 7,
isopentenyltransferase 7		 -0.65 0.32 -0.32
80 AT3G09920 phosphatidyl inositol monophosphate 5 kinase phosphatidyl inositol
monophosphate 5 kinase		 0.65 0.32 -0.29
81 AT5G61990 Pentatricopeptide repeat (PPR) superfamily protein -0.65 0.33 -0.31
82 AT4G26780 Co-chaperone GrpE family protein AR192, mitochondrial GrpE 2 -0.65 0.29 -0.32
83 AT1G49700 Plant protein 1589 of unknown function -0.65 0.3 -0.29
84 AT3G04110 glutamate receptor 1.1 ATGLR1.1, GLUTAMATE RECEPTOR 1,
glutamate receptor 1.1		 -0.65 0.31 -0.31
85 AT1G15510 Tetratricopeptide repeat (TPR)-like superfamily protein ARABIDOPSIS EARLY CHLOROPLAST
BIOGENESIS2, EARLY CHLOROPLAST
BIOGENESIS2, VANILLA CREAM 1		 -0.64 0.32 -0.31
86 AT1G05300 zinc transporter 5 precursor zinc transporter 5 precursor -0.64 0.31 -0.32
87 AT2G29120 glutamate receptor 2.7 glutamate receptor 2.7, GLUTAMATE
RECEPTOR 2.7, glutamate receptor
2.7		 -0.64 0.33 -0.33
88 AT3G09000 proline-rich family protein 0.64 0.29 -0.3
89 AT1G51850 Leucine-rich repeat protein kinase family protein -0.64 0.31 -0.31
90 AT5G65900 DEA(D/H)-box RNA helicase family protein -0.64 0.31 -0.31
91 AT2G26440 Plant invertase/pectin methylesterase inhibitor superfamily -0.64 0.32 -0.3
92 AT3G20310 ethylene response factor 7 ATERF-7, ATERF7, ethylene response
factor 7		 0.64 0.31 -0.32
93 AT1G27290 unknown protein; Has 44 Blast hits to 44 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.63 0.33 -0.35
94 AT4G14500 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.63 0.32 -0.32
95 AT5G09740 histone acetyltransferase of the MYST family 2 histone acetyltransferase of the
MYST family 2		 0.63 0.31 -0.33
96 AT4G30890 ubiquitin-specific protease 24 ubiquitin-specific protease 24 -0.63 0.29 -0.32
97 AT2G36070 translocase inner membrane subunit 44-2 translocase inner membrane subunit
44-2, translocase inner membrane
subunit 44-2		 -0.63 0.29 -0.33
98 AT3G20060 ubiquitin-conjugating enzyme19 ubiquitin-conjugating enzyme19 0.63 0.31 -0.32
99 AT3G57240 beta-1,3-glucanase 3 beta-1,3-glucanase 3 -0.63 0.32 -0.32
100 AT2G43200 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.63 0.32 -0.3
101 AT2G46260 BTB/POZ/Kelch-associated protein 0.63 0.33 -0.31
102 AT2G18900 Transducin/WD40 repeat-like superfamily protein -0.63 0.3 -0.31
103 AT4G14650 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 6 plant structures; EXPRESSED DURING: petal
differentiation and expansion stage; Has 2407 Blast hits to
1833 proteins in 310 species: Archae - 19; Bacteria - 223;
Metazoa - 708; Fungi - 285; Plants - 140; Viruses - 42;
Other Eukaryotes - 990 (source: NCBI BLink).		 -0.63 0.32 -0.33
104 AT2G18700 trehalose phosphatase/synthase 11 trehalose phosphatase/synthase 11,
ATTPSB, trehalose
phosphatase/synthase 11,
TREHALOSE-6-PHOSPHATE SYNTHASE 11		 0.63 0.32 -0.3
105 AT4G12890 Gamma interferon responsive lysosomal thiol (GILT)
reductase family protein		 -0.62 0.31 -0.3
106 AT1G27340 Galactose oxidase/kelch repeat superfamily protein -0.62 0.32 -0.31
107 AT2G28890 poltergeist like 4 poltergeist like 4 -0.62 0.32 -0.31
108 AT1G51380 DEA(D/H)-box RNA helicase family protein -0.62 0.36 -0.31
109 AT4G12500 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.62 0.32 -0.31
110 AT4G01220 Nucleotide-diphospho-sugar transferase family protein male gametophyte defective 4 -0.62 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
111 C0190 O-acetyl-L-Serine - O-acetyl-L-Serine cysteine biosynthesis I,
seleno-amino acid biosynthesis 		0.82 0.41 -0.47 C0190