AT4G20740 : EMBRYO DEFECTIVE 3131
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G20740
Description Pentatricopeptide repeat (PPR-like) superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G20740 Pentatricopeptide repeat (PPR-like) superfamily protein EMBRYO DEFECTIVE 3131 1 0.33 -0.32
2 AT1G79090 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Topoisomerase II-associated protein PAT1
(InterPro:IPR019167); BEST Arabidopsis thaliana protein
match is: Topoisomerase II-associated protein PAT1
(TAIR:AT3G22270.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.73 0.33 -0.31
3 AT1G09620 ATP binding;leucine-tRNA ligases;aminoacyl-tRNA
ligases;nucleotide binding;ATP binding;aminoacyl-tRNA
ligases		 0.72 0.32 -0.3
4 AT3G57130 Ankyrin repeat family protein / BTB/POZ domain-containing
protein		 BLADE ON PETIOLE 1 0.71 0.32 -0.33
5 AT1G48650 DEA(D/H)-box RNA helicase family protein 0.7 0.32 -0.33
6 AT1G73400 Pentatricopeptide repeat (PPR) superfamily protein 0.69 0.3 -0.32
7 AT3G60630 GRAS family transcription factor ARABIDOPSIS THALIANA HAIRY
MERISTEM 2, HAIRY MERISTEM 2, LOST
MERISTEMS 2		 0.68 0.31 -0.31
8 AT4G17370 Oxidoreductase family protein -0.68 0.31 -0.31
9 AT5G51120 polyadenylate-binding protein 1 POLYADENYLATE-BINDING PROTEIN 1,
polyadenylate-binding protein 1		 0.67 0.31 -0.32
10 AT2G45160 GRAS family transcription factor ARABIDOPSIS THALIANA HAIRY
MERISTEM 1, HAIRY MERISTEM 1, LOST
MERISTEMS 1		 0.67 0.32 -0.31
11 AT4G15415 Protein phosphatase 2A regulatory B subunit family protein ATB' GAMMA 0.67 0.3 -0.33
12 AT2G31010 Protein kinase superfamily protein 0.66 0.3 -0.32
13 AT3G26370 O-fucosyltransferase family protein 0.66 0.31 -0.32
14 AT4G37130 hydroxyproline-rich glycoprotein family protein 0.66 0.3 -0.32
15 AT1G53510 mitogen-activated protein kinase 18 ARABIDOPSIS THALIANA MAP KINASE
18, mitogen-activated protein
kinase 18		 0.66 0.32 -0.29
16 AT2G43200 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.66 0.36 -0.33
17 AT3G27110 Peptidase family M48 family protein -0.65 0.32 -0.34
18 AT2G33570 Domain of unknown function (DUF23) 0.65 0.29 -0.33
19 AT1G22985 Integrase-type DNA-binding superfamily protein cytokinin response factor 7 -0.65 0.31 -0.31
20 AT3G06200 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.64 0.31 -0.31
21 AT5G16860 Tetratricopeptide repeat (TPR)-like superfamily protein 0.64 0.31 -0.32
22 AT2G17510 ribonuclease II family protein EMBRYO DEFECTIVE 2763 0.64 0.31 -0.31
23 AT2G28380 dsRNA-binding protein 2 dsRNA-binding protein 2 0.64 0.31 -0.33
24 AT4G04470 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein PMP22 -0.64 0.32 -0.33
25 AT2G38770 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 EMBRYO DEFECTIVE 2765 0.63 0.32 -0.31
26 AT3G10070 TBP-associated factor 12 TBP-associated factor 12,
TATA-ASSOCIATED FACTOR II 58		 0.63 0.3 -0.28
27 AT5G38960 RmlC-like cupins superfamily protein 0.63 0.3 -0.29
28 AT2G38740 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.63 0.31 -0.31
29 AT1G73710 Pentatricopeptide repeat (PPR) superfamily protein 0.63 0.3 -0.32
30 AT5G09740 histone acetyltransferase of the MYST family 2 histone acetyltransferase of the
MYST family 2		 -0.62 0.32 -0.31
31 AT2G41960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G58050.1); Has 11991 Blast
hits to 7260 proteins in 458 species: Archae - 17; Bacteria
- 481; Metazoa - 5028; Fungi - 1325; Plants - 615; Viruses
- 38; Other Eukaryotes - 4487 (source: NCBI BLink).		 0.62 0.32 -0.34
32 AT3G17365 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.62 0.3 -0.33
33 AT5G49500 Signal recognition particle, SRP54 subunit protein -0.61 0.32 -0.31
34 AT5G19700 MATE efflux family protein 0.61 0.33 -0.3
35 AT5G12850 CCCH-type zinc finger protein with ARM repeat domain 0.61 0.33 -0.35
36 AT3G13845 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 22 Blast hits to 22
proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.6 0.32 -0.3
37 AT3G24360 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 -0.6 0.33 -0.32
38 AT5G22750 DNA/RNA helicase protein RAD5, RAD5A 0.6 0.31 -0.33
39 AT1G62020 Coatomer, alpha subunit 0.6 0.32 -0.31
40 AT2G43980 inositol 1,3,4-trisphosphate 5/6-kinase 4 inositol 1,3,4-trisphosphate
5/6-kinase 4, inositol
1,3,4-trisphosphate 5/6-kinase 4		 -0.6 0.31 -0.31
41 AT3G46230 heat shock protein 17.4 ARABIDOPSIS THALIANA HEAT SHOCK
PROTEIN 17.4, heat shock protein
17.4		 -0.59 0.31 -0.34
42 AT5G45370 nodulin MtN21 /EamA-like transporter family protein -0.59 0.3 -0.31
43 AT1G34240 transposable element gene -0.58 0.29 -0.32
44 AT4G04320 malonyl-CoA decarboxylase family protein -0.57 0.3 -0.33
45 AT1G59670 glutathione S-transferase TAU 15 glutathione S-transferase TAU 15,
glutathione S-transferase TAU 15		 -0.56 0.31 -0.3
46 AT1G75290 NAD(P)-binding Rossmann-fold superfamily protein -0.56 0.3 -0.32
47 AT1G53540 HSP20-like chaperones superfamily protein -0.56 0.32 -0.32
48 AT5G28670 transposable element gene -0.56 0.35 -0.32
49 AT5G40020 Pathogenesis-related thaumatin superfamily protein -0.55 0.31 -0.31
50 AT5G51170 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0406
(InterPro:IPR019146); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.55 0.31 -0.32
51 AT1G21550 Calcium-binding EF-hand family protein -0.54 0.3 -0.31
52 AT5G01360 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 3 -0.54 0.31 -0.3
53 AT2G29250 Concanavalin A-like lectin protein kinase family protein -0.53 0.3 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
54 C0048 8-Methylsulfinyl-n-octylglucosinolate - 8-Methylsulfinyloctyl glucosinolate glucosinolate biosynthesis from hexahomomethionine 0.66 0.32 -0.31 C0048