AT4G20770 : -
Query Information
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AGICode AT4G20770
Description Pentatricopeptide repeat (PPR) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G20770 Pentatricopeptide repeat (PPR) superfamily protein 1 0.31 -0.32
2 AT4G09100 RING/U-box superfamily protein 0.79 0.31 -0.32
3 AT5G61940 Ubiquitin carboxyl-terminal hydrolase-related protein 0.76 0.32 -0.32
4 AT3G23800 selenium-binding protein 3 selenium-binding protein 3 0.74 0.32 -0.27
5 AT2G11150 transposable element gene 0.74 0.33 -0.32
6 AT2G41530 S-formylglutathione hydrolase ARABIDOPSIS THALIANA
S-FORMYLGLUTATHIONE HYDROLASE,
S-formylglutathione hydrolase		 -0.74 0.33 -0.32
7 AT1G66900 alpha/beta-Hydrolases superfamily protein -0.74 0.32 -0.29
8 AT5G57420 indole-3-acetic acid inducible 33 indole-3-acetic acid inducible 33 0.73 0.33 -0.29
9 AT4G03770 transposable element gene -0.73 0.29 -0.32
10 AT5G36950 DegP protease 10 DegP protease 10 0.73 0.31 -0.31
11 AT4G11530 cysteine-rich RLK (RECEPTOR-like protein kinase) 34 cysteine-rich RLK (RECEPTOR-like
protein kinase) 34		 0.73 0.31 -0.29
12 AT3G06170 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 -0.72 0.32 -0.29
13 AT1G30350 Pectin lyase-like superfamily protein 0.72 0.33 -0.32
14 AT5G58050 SHV3-like 4 Glycerophosphodiester
phosphodiesterase (GDPD) like 6,
SHV3-like 4		 0.72 0.32 -0.31
15 AT5G06839 bZIP transcription factor family protein bZIP65, TGACG (TGA) motif-binding
protein 10		 0.72 0.34 -0.31
16 AT3G21550 DUF679 domain membrane protein 2 Arabidopsis thaliana DUF679 domain
membrane protein 2, DUF679 domain
membrane protein 2		 -0.72 0.32 -0.29
17 AT4G16920 Disease resistance protein (TIR-NBS-LRR class) family 0.71 0.32 -0.31
18 AT1G08110 lactoylglutathione lyase family protein / glyoxalase I
family protein		 -0.71 0.29 -0.32
19 AT2G24640 ubiquitin-specific protease 19 ubiquitin-specific protease 19 0.71 0.31 -0.32
20 AT2G28590 Protein kinase superfamily protein 0.7 0.32 -0.34
21 AT1G63120 RHOMBOID-like 2 RHOMBOID-like 2, RHOMBOID-like 2 -0.7 0.31 -0.35
22 AT1G20850 xylem cysteine peptidase 2 xylem cysteine peptidase 2 -0.7 0.33 -0.32
23 AT5G10280 myb domain protein 92 ATMYB64, myb domain protein 92,
myb domain protein 92		 0.7 0.32 -0.31
24 AT1G17790 DNA-binding bromodomain-containing protein -0.7 0.31 -0.32
25 AT3G51680 NAD(P)-binding Rossmann-fold superfamily protein AtSDR2, short-chain
dehydrogenase/reductase 2		 0.7 0.32 -0.32
26 AT5G37970 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.7 0.32 -0.32
27 AT1G16480 Tetratricopeptide repeat (TPR)-like superfamily protein 0.7 0.31 -0.31
28 AT3G15840 post-illumination chlorophyll fluorescence increase post-illumination chlorophyll
fluorescence increase		 -0.69 0.31 -0.33
29 AT1G15870 Mitochondrial glycoprotein family protein 0.69 0.31 -0.33
30 AT3G25280 Major facilitator superfamily protein 0.69 0.31 -0.33
31 AT3G62310 RNA helicase family protein 0.69 0.32 -0.33
32 AT3G22070 proline-rich family protein -0.69 0.32 -0.32
33 AT1G31850 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.69 0.31 -0.32
34 AT5G60090 Protein kinase superfamily protein 0.69 0.32 -0.33
35 AT4G26160 atypical CYS HIS rich thioredoxin 1 atypical CYS HIS rich thioredoxin
1		 -0.69 0.32 -0.29
36 AT2G21710 Mitochondrial transcription termination factor family
protein		 embryo defective 2219 0.68 0.31 -0.33
37 AT2G38960 endoplasmic reticulum oxidoreductins 2 endoplasmic reticulum
oxidoreductins 2, endoplasmic
reticulum oxidoreductins 2		 0.68 0.32 -0.32
38 AT5G51890 Peroxidase superfamily protein -0.68 0.3 -0.32
39 AT1G30990 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.68 0.31 -0.32
40 AT2G15695 Protein of unknown function DUF829, transmembrane 53 -0.68 0.32 -0.33
41 AT2G31040 ATP synthase protein I -related -0.68 0.32 -0.33
42 AT2G26650 K+ transporter 1 K+ transporter 1, ATAKT1, K+
transporter 1		 0.68 0.32 -0.33
43 AT1G16830 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.32 -0.33
44 AT3G42390 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.68 0.34 -0.34
45 AT1G43810 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.68 0.32 -0.34
46 AT1G12680 phosphoenolpyruvate carboxylase-related kinase 2 phosphoenolpyruvate
carboxylase-related kinase 2		 -0.68 0.34 -0.33
47 AT2G46070 mitogen-activated protein kinase 12 ATMPK12, MAPK12, mitogen-activated
protein kinase 12		 -0.67 0.32 -0.31
48 AT1G47350 F-box associated ubiquitination effector family protein -0.67 0.3 -0.33
49 AT2G21470 SUMO-activating enzyme 2 SUMO-ACTIVATING ENZYME 2, EMBRYO
DEFECTIVE 2764, SUMO-activating
enzyme 2		 0.67 0.31 -0.31
50 AT1G13810 Restriction endonuclease, type II-like superfamily protein 0.67 0.3 -0.31
51 AT5G45970 RAC-like 2 Arabidopsis RAC-like 2,
ARABIDOPSIS THALIANA RAC 2,
RHO-RELATED PROTEIN FROM PLANTS 7,
RAC-like 2, ROP7		 -0.67 0.31 -0.31
52 AT1G78890 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16840.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.67 0.32 -0.31
53 AT4G32630 ArfGap/RecO-like zinc finger domain-containing protein -0.67 0.3 -0.31
54 AT5G61500 autophagy 3 (APG3) ATATG3, ATG3 -0.67 0.33 -0.32
55 AT5G65520 Tetratricopeptide repeat (TPR)-like superfamily protein -0.67 0.33 -0.31
56 AT5G01310 APRATAXIN-like APRATAXIN-like 0.67 0.31 -0.31
57 AT1G28470 NAC domain containing protein 10 NAC domain containing protein 10,
NAC domain containing protein 10,
SECONDARY WALL-ASSOCIATED NAC
DOMAIN PROTEIN 3		 -0.66 0.33 -0.28
58 AT5G51320 transposable element gene -0.66 0.32 -0.33
59 AT2G05120 Nucleoporin, Nup133/Nup155-like 0.66 0.3 -0.33
60 AT1G29390 cold regulated 314 thylakoid membrane 2 cold regulated 314 thylakoid
membrane 2, COLD REGULATED 314
INNER MEMBRANE 2		 -0.66 0.32 -0.33
61 AT1G50760 Aminotransferase-like, plant mobile domain family protein 0.66 0.32 -0.31
62 AT3G53820 C2H2 and C2HC zinc fingers superfamily protein 0.66 0.33 -0.31
63 AT5G42560 Abscisic acid-responsive (TB2/DP1, HVA22) family protein -0.66 0.31 -0.31
64 AT3G48900 single-stranded DNA endonuclease family protein 0.65 0.33 -0.3
65 AT3G56240 copper chaperone copper chaperone -0.65 0.31 -0.34
66 AT5G45180 Flavin-binding monooxygenase family protein 0.65 0.32 -0.33
67 AT4G16780 homeobox protein 2 homeobox protein 2, ARABIDOPSIS
THALIANA HOMEOBOX PROTEIN 2, HAT4,
homeobox protein 2		 -0.65 0.31 -0.32
68 AT1G13420 sulfotransferase 4B ARABIDOPSIS THALIANA
SULFOTRANSFERASE 4B,
sulfotransferase 4B		 0.65 0.33 -0.32
69 AT1G07980 nuclear factor Y, subunit C10 nuclear factor Y, subunit C10 -0.65 0.33 -0.34
70 AT5G12180 calcium-dependent protein kinase 17 calcium-dependent protein kinase
17		 0.65 0.31 -0.32
71 AT4G38740 rotamase CYP 1 rotamase CYP 1 -0.65 0.34 -0.31
72 AT5G26120 alpha-L-arabinofuranosidase 2 alpha-L-arabinofuranosidase 2,
ARABIDOPSIS THALIANA
ALPHA-L-ARABINOFURANOSIDASE 2		 -0.65 0.33 -0.34
73 AT2G19640 ASH1-related protein 2 ASH1-related 2, SET DOMAIN PROTEIN
39		 0.65 0.33 -0.3
74 AT2G42060 Cysteine/Histidine-rich C1 domain family protein 0.65 0.33 -0.29
75 AT4G34850 Chalcone and stilbene synthase family protein LESS ADHESIVE POLLEN 5 0.65 0.3 -0.32
76 AT3G62020 germin-like protein 10 germin-like protein 10 -0.65 0.31 -0.32
77 AT3G26125 cytochrome P450, family 86, subfamily C, polypeptide 2 cytochrome P450, family 86,
subfamily C, polypeptide 2		 -0.65 0.31 -0.32
78 AT3G50420 Pentatricopeptide repeat (PPR) superfamily protein 0.65 0.3 -0.32
79 AT1G09940 Glutamyl-tRNA reductase family protein HEMA2 0.65 0.31 -0.33
80 AT3G22940 F-box associated ubiquitination effector family protein -0.65 0.32 -0.31
81 AT3G43630 Vacuolar iron transporter (VIT) family protein 0.65 0.33 -0.32
82 AT5G39350 Tetratricopeptide repeat (TPR)-like superfamily protein 0.64 0.31 -0.31
83 AT2G14810 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.64 0.32 -0.3
84 AT2G23840 HNH endonuclease -0.64 0.3 -0.33
85 AT1G05750 Tetratricopeptide repeat (TPR)-like superfamily protein CLB19, pigment defective 247 0.64 0.32 -0.28
86 AT1G06760 winged-helix DNA-binding transcription factor family
protein		 -0.64 0.3 -0.3
87 AT5G19140 Aluminium induced protein with YGL and LRDR motifs AILP1, ATAILP1 -0.64 0.31 -0.32
88 AT5G13530 protein kinases;ubiquitin-protein ligases KEEP ON GOING -0.64 0.31 -0.32
89 AT5G11570 Major facilitator superfamily protein 0.64 0.32 -0.32
90 AT5G48200 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.64 0.33 -0.33
91 AT5G10810 enhancer of rudimentary protein, putative ARABIDOPSIS THALIANA ENHANCER OF
RUDIMENTARY HOMOLOGUE, ENHANCER OF
RUDIMENTARY HOMOLOGUE		 -0.64 0.29 -0.29
92 AT5G13560 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37370.1); Has 12055 Blast
hits to 8846 proteins in 811 species: Archae - 217;
Bacteria - 1046; Metazoa - 6104; Fungi - 1115; Plants -
528; Viruses - 14; Other Eukaryotes - 3031 (source: NCBI
BLink).		 0.63 0.31 -0.33
93 AT1G46912 F-box associated ubiquitination effector family protein 0.63 0.31 -0.31
94 AT1G70180 Sterile alpha motif (SAM) domain-containing protein 0.63 0.29 -0.3
95 AT4G23310 cysteine-rich RLK (RECEPTOR-like protein kinase) 23 cysteine-rich RLK (RECEPTOR-like
protein kinase) 23		 -0.63 0.31 -0.3
96 AT1G69010 BES1-interacting Myc-like protein 2 BES1-interacting Myc-like protein
2		 -0.63 0.31 -0.32
97 AT5G65170 VQ motif-containing protein 0.63 0.32 -0.32
98 AT1G36600 transposable element gene 0.63 0.33 -0.31
99 AT3G12250 TGACG motif-binding factor 6 BZIP45, TGACG motif-binding factor
6		 -0.63 0.31 -0.31
100 AT3G31920 transposable element gene 0.63 0.32 -0.31
101 AT3G47230 transposable element gene -0.62 0.31 -0.33
102 AT3G51770 tetratricopeptide repeat (TPR)-containing protein ARABIDOPSIS ETHYLENE OVERPRODUCER
1, ETHYLENE OVERPRODUCER 1		 -0.62 0.3 -0.31
103 AT3G28770 Protein of unknown function (DUF1216) -0.62 0.32 -0.32
104 AT5G39860 basic helix-loop-helix (bHLH) DNA-binding family protein BASIC HELIX-LOOP-HELIX PROTEIN
136, BANQUO 1, PACLOBUTRAZOL
RESISTANCE1		 -0.62 0.29 -0.3
105 AT5G40820 Ataxia telangiectasia-mutated and RAD3-related ARABIDOPSIS THALIANA ATAXIA
TELANGIECTASIA-MUTATED AND
RAD3-RELATED, Ataxia
telangiectasia-mutated and
RAD3-related, ATRAD3		 0.62 0.35 -0.33
106 AT1G70210 CYCLIN D1;1 ATCYCD1;1, CYCLIN D1;1 -0.62 0.29 -0.34
107 AT5G53070 Ribosomal protein L9/RNase H1 0.62 0.31 -0.31
108 AT3G62640 Protein of unknown function (DUF3511) 0.62 0.32 -0.3
109 AT4G03750 transposable element gene 0.62 0.32 -0.31
110 AT1G32450 nitrate transporter 1.5 nitrate transporter 1.5 0.62 0.29 -0.32
111 AT3G21340 Leucine-rich repeat protein kinase family protein 0.62 0.32 -0.33
112 AT1G67640 Transmembrane amino acid transporter family protein -0.62 0.32 -0.34
113 AT5G57160 DNA ligase IV ATLIG4, DNA LIGASE IV 0.62 0.32 -0.32
114 AT1G49710 fucosyltransferase 12 ATFUT12, FUCT2, FUCTB,
fucosyltransferase 12		 -0.61 0.3 -0.33
115 AT2G40600 appr-1-p processing enzyme family protein -0.61 0.33 -0.32
116 AT5G66160 receptor homology region transmembrane domain ring H2 motif
protein 1		 ARABIDOPSIS THALIANA RECEPTOR
HOMOLOGY REGION TRANSMEMBRANE
DOMAIN RING H2 MOTIF PROTEIN 1,
receptor homology region
transmembrane domain ring H2 motif
protein 1		 -0.61 0.33 -0.31
117 AT3G07930 DNA glycosylase superfamily protein -0.61 0.32 -0.31
118 AT5G10770 Eukaryotic aspartyl protease family protein -0.61 0.3 -0.32
119 AT4G27110 COBRA-like protein 11 precursor COBRA-like protein 11 precursor -0.61 0.32 -0.33
120 AT4G36160 NAC domain containing protein 76 NAC domain containing protein 76,
NAC domain containing protein 76,
VASCULAR-RELATED NAC-DOMAIN 2		 -0.61 0.33 -0.32
121 AT2G22740 SU(VAR)3-9 homolog 6 SET DOMAIN PROTEIN 23, SU(VAR)3-9
homolog 6		 -0.61 0.31 -0.31
122 AT1G61760 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.61 0.33 -0.31
123 AT4G13230 Late embryogenesis abundant protein (LEA) family protein -0.6 0.32 -0.35
124 AT2G14260 proline iminopeptidase proline iminopeptidase -0.6 0.33 -0.34
125 AT1G67890 PAS domain-containing protein tyrosine kinase family
protein		 -0.6 0.3 -0.3
126 AT5G26140 Putative lysine decarboxylase family protein ATLOG9, LONELY GUY 9 -0.6 0.3 -0.31
127 AT3G32090 WRKY family transcription factor -0.6 0.31 -0.32
128 AT1G61410 DNA double-strand break repair and VJ recombination XRCC4 -0.6 0.32 -0.31
129 AT2G02760 ubiquiting-conjugating enzyme 2 ubiquiting-conjugating enzyme 2,
ubiquitin-conjugating enzyme 2,
ubiquiting-conjugating enzyme 2		 -0.6 0.32 -0.35
130 AT1G75930 extracellular lipase 6 extracellular lipase 6 -0.6 0.34 -0.31
131 AT5G25550 Leucine-rich repeat (LRR) family protein -0.6 0.34 -0.32
132 AT3G30750 transposable element gene -0.6 0.32 -0.33
133 AT5G10090 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 13 -0.6 0.32 -0.36
134 AT1G23640 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:
petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4
anthesis, petal differentiation and expansion stage;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF220 (InterPro:IPR003863); BEST Arabidopsis thaliana
protein match is: Domain of unknown function DUF220
(TAIR:AT1G23660.1); Has 270 Blast hits to 130 proteins in
12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 270; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.34 -0.31
135 AT1G31440 SH3 domain-containing protein -0.59 0.33 -0.29
136 AT4G14480 Protein kinase superfamily protein -0.59 0.3 -0.31
137 AT3G30846 transposable element gene -0.59 0.32 -0.33
138 AT1G13610 alpha/beta-Hydrolases superfamily protein -0.59 0.3 -0.31
139 AT4G07540 transposable element gene -0.59 0.34 -0.29
140 AT3G28610 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.59 0.31 -0.3
141 AT4G16430 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.59 0.34 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
142 C0031 3-Methylthio-n-propylglucosinolate - 3-Methylthiopropylglucosinolate glucosinolate biosynthesis from homomethionine 0.71 0.45 -0.41 C0031
143 C0143 Maltitol - - starch degradation II -0.62 0.44 -0.44
144 C0207 Phosphatidylglycerol-34:5 - - - -0.6 0.45 -0.47