AGICode | AT4G20020 |
Description | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44780.1); Has 28928 Blast hits to 16023 proteins in 1033 species: Archae - 4; Bacteria - 4155; Metazoa - 15463; Fungi - 2938; Plants - 3091; Viruses - 205; Other Eukaryotes - 3072 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G20020 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44780.1); Has 28928 Blast hits to 16023 proteins in 1033 species: Archae - 4; Bacteria - 4155; Metazoa - 15463; Fungi - 2938; Plants - 3091; Viruses - 205; Other Eukaryotes - 3072 (source: NCBI BLink). |
1 | 0.32 | -0.32 | |||
2 | AT5G06360 | Ribosomal protein S8e family protein | 0.84 | 0.32 | -0.35 | |||
3 | AT4G31580 | serine/arginine-rich 22 | RS-containing zinc finger protein 22, RS-containing zinc finger protein 22, RS-CONTAINING ZINC FINGER PROTEIN 22, serine/arginine-rich 22, SRZ22 |
0.84 | 0.34 | -0.3 | ||
4 | AT3G46560 | Tim10/DDP family zinc finger protein | embryo defective 2474, TIM9 | 0.84 | 0.3 | -0.33 | ||
5 | AT3G17465 | ribosomal protein L3 plastid | ribosomal protein L3 plastid | 0.84 | 0.33 | -0.33 | ||
6 | AT3G51010 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.84 | 0.3 | -0.31 | |||
7 | AT2G42710 | Ribosomal protein L1p/L10e family | 0.83 | 0.29 | -0.32 | |||
8 | AT4G39300 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.83 | 0.32 | -0.3 | |||
9 | AT2G44860 | Ribosomal protein L24e family protein | 0.83 | 0.31 | -0.3 | |||
10 | AT3G03920 | H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein | 0.82 | 0.3 | -0.3 | |||
11 | AT1G16870 | mitochondrial 28S ribosomal protein S29-related | 0.81 | 0.32 | -0.31 | |||
12 | AT1G44835 | YbaK/aminoacyl-tRNA synthetase-associated domain | 0.81 | 0.32 | -0.33 | |||
13 | AT5G40770 | prohibitin 3 | prohibitin 3, prohibitin 3 | 0.81 | 0.35 | -0.31 | ||
14 | AT1G31660 | CONTAINS InterPro DOMAIN/s: Bystin (InterPro:IPR007955); Has 475 Blast hits to 467 proteins in 210 species: Archae - 0; Bacteria - 9; Metazoa - 155; Fungi - 139; Plants - 55; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink). |
0.81 | 0.32 | -0.33 | |||
15 | AT5G23900 | Ribosomal protein L13e family protein | 0.8 | 0.3 | -0.3 | |||
16 | AT5G02050 | Mitochondrial glycoprotein family protein | 0.8 | 0.29 | -0.31 | |||
17 | AT3G11710 | lysyl-tRNA synthetase 1 | lysyl-tRNA synthetase 1 | 0.79 | 0.31 | -0.31 | ||
18 | AT2G35790 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1301 (InterPro:IPR009724); Has 116 Blast hits to 116 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 53; Fungi - 6; Plants - 49; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). |
0.79 | 0.31 | -0.33 | |||
19 | AT4G26210 | Mitochondrial ATP synthase subunit G protein | 0.79 | 0.31 | -0.31 | |||
20 | AT4G23620 | Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain |
0.79 | 0.33 | -0.32 | |||
21 | AT1G52930 | Ribosomal RNA processing Brix domain protein | 0.79 | 0.34 | -0.33 | |||
22 | AT3G15000 | cobalt ion binding | 0.79 | 0.3 | -0.29 | |||
23 | AT3G22300 | ribosomal protein S10 | ribosomal protein S10 | 0.79 | 0.35 | -0.35 | ||
24 | AT1G02870 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosome biogenesis protein Nop16 (InterPro:IPR019002); Has 104 Blast hits to 104 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 63; Plants - 35; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). |
0.79 | 0.33 | -0.32 | |||
25 | AT5G02450 | Ribosomal protein L36e family protein | 0.79 | 0.29 | -0.31 | |||
26 | AT4G15640 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G21465.1); Has 38 Blast hits to 38 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.79 | 0.32 | -0.3 | |||
27 | AT1G27390 | translocase outer membrane 20-2 | translocase outer membrane 20-2 | 0.78 | 0.31 | -0.32 | ||
28 | AT4G35050 | Transducin family protein / WD-40 repeat family protein | MULTICOPY SUPPRESSOR OF IRA1 3, NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP C 3 |
0.78 | 0.32 | -0.32 | ||
29 | AT4G01280 | Homeodomain-like superfamily protein | -0.78 | 0.34 | -0.31 | |||
30 | AT3G25545 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 38 Blast hits to 38 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.78 | 0.33 | -0.3 | |||
31 | AT5G66410 | phosducin-like protein 3 homolog | phosducin-like protein 3 homolog | 0.78 | 0.33 | -0.31 | ||
32 | AT2G46230 | PIN domain-like family protein | 0.78 | 0.3 | -0.31 | |||
33 | AT2G20940 | Protein of unknown function (DUF1279) | 0.78 | 0.33 | -0.33 | |||
34 | AT1G55900 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
embryo defective 1860, TIM50 | 0.78 | 0.3 | -0.33 | ||
35 | AT1G26740 | Ribosomal L32p protein family | 0.78 | 0.32 | -0.34 | |||
36 | AT3G01790 | Ribosomal protein L13 family protein | 0.78 | 0.31 | -0.32 | |||
37 | AT1G30580 | GTP binding | 0.77 | 0.3 | -0.34 | |||
38 | AT2G39795 | Mitochondrial glycoprotein family protein | 0.77 | 0.31 | -0.3 | |||
39 | AT3G62940 | Cysteine proteinases superfamily protein | 0.77 | 0.33 | -0.33 | |||
40 | AT3G06790 | plastid developmental protein DAG, putative | 0.76 | 0.35 | -0.31 | |||
41 | AT1G49410 | translocase of the outer mitochondrial membrane 6 | translocase of the outer mitochondrial membrane 6 |
0.76 | 0.31 | -0.33 | ||
42 | AT3G06930 | protein arginine methyltransferase 4B | ARABIDOPSIS THALIANA PROTEIN ARGININE METHYLTRANSFERASE 4B, protein arginine methyltransferase 4B |
0.76 | 0.31 | -0.33 | ||
43 | AT3G13160 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.76 | 0.29 | -0.3 | |||
44 | AT2G37020 | Translin family protein | 0.76 | 0.35 | -0.31 | |||
45 | AT4G02230 | Ribosomal protein L19e family protein | 0.75 | 0.29 | -0.3 | |||
46 | AT1G25260 | Ribosomal protein L10 family protein | 0.75 | 0.31 | -0.3 | |||
47 | AT5G13780 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | 0.75 | 0.32 | -0.31 | |||
48 | AT1G60770 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.75 | 0.33 | -0.33 | |||
49 | AT4G31120 | SHK1 binding protein 1 | ATPRMT5, PROTEIN ARGININE METHYLTRANSFERASE 5, SHK1 binding protein 1 |
0.75 | 0.31 | -0.33 | ||
50 | AT5G57370 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1777 (InterPro:IPR013957); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.75 | 0.29 | -0.33 | |||
51 | AT5G23300 | pyrimidine d | pyrimidine d | 0.75 | 0.35 | -0.31 | ||
52 | AT3G04580 | Signal transduction histidine kinase, hybrid-type, ethylene sensor |
ETHYLENE INSENSITIVE 4 | 0.75 | 0.31 | -0.33 | ||
53 | AT3G19630 | Radical SAM superfamily protein | 0.74 | 0.3 | -0.32 | |||
54 | AT2G21160 | Translocon-associated protein (TRAP), alpha subunit | 0.74 | 0.32 | -0.32 | |||
55 | AT2G01970 | Endomembrane protein 70 protein family | 0.74 | 0.32 | -0.3 | |||
56 | AT5G16930 | AAA-type ATPase family protein | 0.74 | 0.31 | -0.3 | |||
57 | AT5G19680 | Leucine-rich repeat (LRR) family protein | 0.74 | 0.31 | -0.3 | |||
58 | AT3G57550 | guanylate kinase | guanylate kinase, GUANYLATE KINAS 2 |
0.74 | 0.3 | -0.32 | ||
59 | AT1G71840 | transducin family protein / WD-40 repeat family protein | 0.73 | 0.33 | -0.3 | |||
60 | AT5G23140 | nuclear-encoded CLP protease P7 | CLPP2, nuclear-encoded CLP protease P7 |
0.73 | 0.33 | -0.3 | ||
61 | AT3G15640 | Rubredoxin-like superfamily protein | 0.73 | 0.31 | -0.33 | |||
62 | AT1G07615 | GTP-binding protein Obg/CgtA | 0.73 | 0.34 | -0.3 | |||
63 | AT3G61890 | homeobox 12 | homeobox 12, ARABIDOPSIS THALIANA HOMEOBOX 12, homeobox 12 |
-0.73 | 0.29 | -0.3 | ||
64 | AT2G47420 | Ribosomal RNA adenine dimethylase family protein | adenosine dimethyl transferase 1A | 0.73 | 0.32 | -0.32 | ||
65 | AT2G25430 | epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related |
0.73 | 0.31 | -0.33 | |||
66 | AT1G61870 | pentatricopeptide repeat 336 | pentatricopeptide repeat 336 | 0.73 | 0.31 | -0.32 | ||
67 | AT5G24570 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.73 | 0.32 | -0.31 | |||
68 | AT4G31080 | Protein of unknown function (DUF2296) | 0.73 | 0.31 | -0.32 | |||
69 | AT2G30050 | transducin family protein / WD-40 repeat family protein | 0.73 | 0.3 | -0.33 | |||
70 | AT5G10350 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.73 | 0.31 | -0.32 | |||
71 | AT5G61030 | glycine-rich RNA-binding protein 3 | glycine-rich RNA-binding protein 3 | 0.73 | 0.3 | -0.34 | ||
72 | AT5G62290 | nucleotide-sensitive chloride conductance regulator (ICln) family protein |
0.73 | 0.31 | -0.32 | |||
73 | AT3G11410 | protein phosphatase 2CA | AHG3, ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA, protein phosphatase 2CA |
-0.73 | 0.31 | -0.3 | ||
74 | AT5G57350 | H(+)-ATPase 3 | H(+)-ATPase 3, ARABIDOPSIS THALIANA ARABIDOPSIS H(+)-ATPASE, H(+)-ATPase 3 |
-0.73 | 0.31 | -0.31 | ||
75 | AT5G09970 | cytochrome P450, family 78, subfamily A, polypeptide 7 | cytochrome P450, family 78, subfamily A, polypeptide 7 |
0.73 | 0.3 | -0.31 | ||
76 | AT1G80310 | sulfate transmembrane transporters | molybdate transporter 2 | -0.69 | 0.31 | -0.31 | ||
77 | AT5G62490 | HVA22 homologue B | ARABIDOPSIS THALIANA HVA22 HOMOLOGUE B, HVA22 homologue B |
-0.67 | 0.31 | -0.3 | ||
78 | AT4G13810 | receptor like protein 47 | receptor like protein 47, receptor like protein 47 |
-0.67 | 0.32 | -0.33 | ||
79 | AT1G19715 | Mannose-binding lectin superfamily protein | -0.66 | 0.32 | -0.31 | |||
80 | AT5G27950 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.66 | 0.32 | -0.32 | |||
81 | AT4G02630 | Protein kinase superfamily protein | -0.66 | 0.29 | -0.33 | |||
82 | AT1G78130 | Major facilitator superfamily protein | unfertilized embryo sac 2 | -0.66 | 0.3 | -0.32 | ||
83 | AT5G05220 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.65 | 0.32 | -0.3 | |||
84 | AT5G62130 | Per1-like family protein | -0.65 | 0.32 | -0.29 | |||
85 | AT5G62800 | Protein with RING/U-box and TRAF-like domains | -0.65 | 0.32 | -0.31 | |||
86 | AT3G08870 | Concanavalin A-like lectin protein kinase family protein | -0.65 | 0.29 | -0.35 | |||
87 | AT5G45090 | phloem protein 2-A7 | phloem protein 2-A7, phloem protein 2-A7 |
-0.64 | 0.32 | -0.31 | ||
88 | AT1G63740 | Disease resistance protein (TIR-NBS-LRR class) family | -0.64 | 0.3 | -0.33 | |||
89 | AT1G19835 | Plant protein of unknown function (DUF869) | -0.64 | 0.32 | -0.3 | |||
90 | AT1G72650 | TRF-like 6 | TRF-like 6 | -0.64 | 0.29 | -0.3 | ||
91 | AT1G16730 | unknown protein 6 | unknown protein 6 | -0.64 | 0.32 | -0.33 | ||
92 | AT3G56050 | Protein kinase family protein | -0.63 | 0.32 | -0.3 | |||
93 | AT5G07050 | nodulin MtN21 /EamA-like transporter family protein | -0.63 | 0.31 | -0.31 | |||
94 | AT2G46180 | golgin candidate 4 | golgin candidate 4 | -0.63 | 0.3 | -0.3 | ||
95 | AT5G52460 | FBD, F-box and Leucine Rich Repeat domains containing protein |
embryo sac development arrest 41 | -0.63 | 0.32 | -0.32 | ||
96 | AT1G57870 | shaggy-like kinase 42 | shaggy-like kinase 42, shaggy-like kinase 42 |
-0.61 | 0.32 | -0.32 | ||
97 | AT1G56710 | Pectin lyase-like superfamily protein | -0.6 | 0.31 | -0.31 | |||
98 | AT1G24735 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.6 | 0.3 | -0.33 | |||
99 | AT1G60270 | beta glucosidase 6 | beta glucosidase 6 | -0.6 | 0.32 | -0.32 | ||
100 | AT3G26160 | cytochrome P450, family 71, subfamily B, polypeptide 17 | cytochrome P450, family 71, subfamily B, polypeptide 17 |
-0.6 | 0.34 | -0.3 | ||
101 | AT2G29970 | Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein |
-0.59 | 0.34 | -0.31 | |||
102 | AT5G42370 | Calcineurin-like metallo-phosphoesterase superfamily protein |
-0.59 | 0.3 | -0.31 | |||
103 | AT5G46520 | Disease resistance protein (TIR-NBS-LRR class) family | -0.59 | 0.32 | -0.33 | |||
104 | AT3G56440 | homolog of yeast autophagy 18 (ATG18) D | homolog of yeast autophagy 18 (ATG18) D, homolog of yeast autophagy 18 (ATG18) D |
-0.59 | 0.31 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
105 | C0097 | Glucosamine-6-phosphate | D-Glucosamine-6-phosphate | D-Glucosamine-6-phosphate | UDP-N-acetyl-D-glucosamine biosynthesis II | -0.63 | 0.3 | -0.32 |