AT4G18840 : -
Query Information
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AGICode AT4G18840
Description Pentatricopeptide repeat (PPR-like) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G18840 Pentatricopeptide repeat (PPR-like) superfamily protein 1 0.32 -0.33
2 AT1G28170 sulphotransferase 7 sulphotransferase 7 0.7 0.31 -0.3
3 AT2G22840 growth-regulating factor 1 growth-regulating factor 1,
growth-regulating factor 1		 0.66 0.31 -0.32
4 AT1G64790 ILITYHIA ILITYHIA 0.66 0.32 -0.29
5 AT1G20960 U5 small nuclear ribonucleoprotein helicase, putative embryo defective 1507 0.66 0.32 -0.32
6 AT2G03690 coenzyme Q biosynthesis Coq4 family protein / ubiquinone
biosynthesis Coq4 family protein		 -0.65 0.32 -0.3
7 AT5G09880 Splicing factor, CC1-like 0.65 0.31 -0.33
8 AT2G46000 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Mesoderm development candidate 2 (InterPro:IPR019330); Has
31 Blast hits to 31 proteins in 13 species: Archae - 0;
Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.32 -0.3
9 AT1G12620 Pentatricopeptide repeat (PPR) superfamily protein 0.63 0.3 -0.29
10 AT4G28270 RING membrane-anchor 2 ATRMA2, RING membrane-anchor 2 -0.63 0.31 -0.32
11 AT1G05910 cell division cycle protein 48-related / CDC48-related 0.63 0.32 -0.31
12 AT2G29340 NAD-dependent epimerase/dehydratase family protein -0.62 0.3 -0.33
13 AT1G22040 Galactose oxidase/kelch repeat superfamily protein -0.62 0.3 -0.31
14 AT1G15880 golgi snare 11 atgos11, golgi snare 11 -0.62 0.32 -0.3
15 AT3G26560 ATP-dependent RNA helicase, putative 0.62 0.33 -0.31
16 AT3G54280 DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA binding;helicases		 ATBTAF1, BTAF1, CHA16, CHR16, ROOT
GROWTH DEFECTIVE 3		 0.62 0.31 -0.3
17 AT4G02010 Protein kinase superfamily protein 0.62 0.32 -0.34
18 AT3G10220 tubulin folding cofactor B EMBRYO DEFECTIVE 2804 -0.62 0.32 -0.32
19 AT5G17030 UDP-glucosyl transferase 78D3 UDP-glucosyl transferase 78D3 0.61 0.32 -0.32
20 AT3G22360 alternative oxidase 1B alternative oxidase 1B -0.61 0.31 -0.32
21 AT4G39560 Galactose oxidase/kelch repeat superfamily protein 0.61 0.31 -0.31
22 AT2G41060 RNA-binding (RRM/RBD/RNP motifs) family protein 0.61 0.31 -0.31
23 AT5G41770 crooked neck protein, putative / cell cycle protein,
putative		 0.6 0.3 -0.32
24 AT5G13390 no exine formation 1 NO EXINE FORMATION 1 0.6 0.32 -0.31
25 AT1G21650 Preprotein translocase SecA family protein SECA2 0.6 0.32 -0.31
26 AT1G13050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G26350.1); Has 538 Blast hits
to 510 proteins in 88 species: Archae - 0; Bacteria - 23;
Metazoa - 81; Fungi - 36; Plants - 361; Viruses - 8; Other
Eukaryotes - 29 (source: NCBI BLink).		 0.59 0.33 -0.34
27 AT4G15870 terpene synthase 1 terpene synthase 1, terpene
synthase 1		 -0.59 0.33 -0.3
28 AT5G44510 target of AVRB operation1 target of AVRB operation1 0.59 0.29 -0.32
29 AT3G13225 WW domain-containing protein 0.59 0.3 -0.3
30 AT5G44530 Subtilase family protein 0.59 0.32 -0.29
31 AT2G35510 similar to RCD one 1 similar to RCD one 1 0.59 0.3 -0.31
32 AT4G27910 SET domain protein 16 ATX4, SET domain protein 16 0.59 0.3 -0.31
33 AT5G04740 ACT domain-containing protein ACT domain repeats 12 -0.58 0.35 -0.29
34 AT1G54850 HSP20-like chaperones superfamily protein -0.58 0.31 -0.31
35 AT5G44920 Toll-Interleukin-Resistance (TIR) domain family protein -0.58 0.32 -0.32
36 AT5G16270 sister chromatid cohesion 1 protein 4 ARABIDOPSIS HOMOLOG OF RAD21 3,
sister chromatid cohesion 1
protein 4		 0.58 0.32 -0.34
37 AT3G50210 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.58 0.32 -0.31
38 AT2G36900 membrin 11 ATMEMB11, membrin 11 -0.58 0.33 -0.31
39 AT5G47400 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.58 0.3 -0.3
40 AT4G23410 tetraspanin5 tetraspanin5 -0.58 0.3 -0.33
41 AT3G52860 unknown protein; Has 86 Blast hits to 86 proteins in 36
species: Archae - 0; Bacteria - 2; Metazoa - 41; Fungi -
13; Plants - 26; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.57 0.33 -0.3
42 AT1G22510 RING/U-box protein with domain of unknown function (DUF
1232)		 -0.57 0.33 -0.34
43 AT5G22980 serine carboxypeptidase-like 47 serine carboxypeptidase-like 47 0.57 0.32 -0.31
44 AT2G18760 chromatin remodeling 8 chromatin remodeling 8 0.57 0.34 -0.3
45 AT1G04910 O-fucosyltransferase family protein 0.57 0.32 -0.31
46 AT2G27280 Coiled-coil domain-containing protein 55 (DUF2040) -0.56 0.35 -0.32
47 AT4G02560 Homeodomain-like superfamily protein luminidependens 0.56 0.31 -0.3
48 AT3G47530 Pentatricopeptide repeat (PPR) superfamily protein 0.56 0.31 -0.3
49 AT5G38840 SMAD/FHA domain-containing protein 0.56 0.33 -0.3
50 AT5G42440 Protein kinase superfamily protein -0.56 0.34 -0.31
51 AT1G15020 quiescin-sulfhydryl oxidase 1 quiescin-sulfhydryl oxidase 1,
QSO2, quiescin-sulfhydryl oxidase
1		 -0.56 0.35 -0.3
52 AT3G30400 transposable element gene -0.56 0.3 -0.32
53 AT1G07170 PHF5-like protein -0.55 0.32 -0.33
54 AT5G51170 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0406
(InterPro:IPR019146); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.55 0.3 -0.31
55 AT4G18330 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 -0.55 0.31 -0.32
56 AT3G60480 unknown protein; Has 17 Blast hits to 17 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.55 0.32 -0.31
57 AT5G13990 exocyst subunit exo70 family protein C2 exocyst subunit exo70 family
protein C2, exocyst subunit exo70
family protein C2		 -0.55 0.32 -0.32
58 AT1G66470 ROOT HAIR DEFECTIVE6 AtRHD6, ROOT HAIR DEFECTIVE6 -0.54 0.33 -0.29
59 AT3G59610 F-box family protein / jacalin lectin family protein 0.54 0.32 -0.32
60 AT3G23030 indole-3-acetic acid inducible 2 indole-3-acetic acid inducible 2 -0.54 0.32 -0.31
61 AT2G20290 myosin-like protein XIG MYOSIN XI G, myosin-like protein
XIG		 0.54 0.32 -0.3
62 AT3G02170 longifolia2 LONGIFOLIA2 -0.53 0.33 -0.34
63 AT1G55660 FBD, F-box and Leucine Rich Repeat domains containing
protein		 -0.53 0.32 -0.31
64 AT1G73910 actin-related proteins 4A actin-related proteins 4A,
actin-related proteins 4A		 -0.53 0.33 -0.32
65 AT1G11000 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 4,
MILDEW RESISTANCE LOCUS O 4		 -0.52 0.3 -0.3
66 AT1G76210 Arabidopsis protein of unknown function (DUF241) -0.52 0.31 -0.33
67 AT3G04730 indoleacetic acid-induced protein 16 indoleacetic acid-induced protein
16		 -0.51 0.32 -0.31
68 AT1G14340 RNA-binding (RRM/RBD/RNP motifs) family protein -0.51 0.35 -0.3
69 AT1G74660 mini zinc finger 1 mini zinc finger 1 -0.5 0.31 -0.32
70 AT5G47000 Peroxidase superfamily protein -0.5 0.32 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
71 C0093 Galactinol dihydrate - Galactinol galactosylcyclitol biosynthesis,
stachyose biosynthesis,
ajugose biosynthesis I (galactinol-dependent) 		0.79 0.44 -0.46 C0093