AT4G18930 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G18930
Description RNA ligase/cyclic nucleotide phosphodiesterase family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G18930 RNA ligase/cyclic nucleotide phosphodiesterase family
protein		 1 0.33 -0.32
2 AT3G51430 Calcium-dependent phosphotriesterase superfamily protein STRICTOSIDINE SYNTHASE-LIKE 5,
YELLOW-LEAF-SPECIFIC GENE 2		 0.75 0.32 -0.32
3 AT2G24230 Leucine-rich repeat protein kinase family protein -0.74 0.31 -0.32
4 AT1G24290 AAA-type ATPase family protein -0.73 0.31 -0.31
5 AT3G57700 Protein kinase superfamily protein 0.72 0.3 -0.34
6 AT1G74210 PLC-like phosphodiesterases superfamily protein AtGDPD5, glycerophosphodiester
phosphodiesterase 5		 0.7 0.3 -0.32
7 AT3G26210 cytochrome P450, family 71, subfamily B, polypeptide 23 cytochrome P450, family 71,
subfamily B, polypeptide 23		 0.69 0.29 -0.29
8 AT5G53030 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF688 (InterPro:IPR007789); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G27810.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.68 0.32 -0.34
9 AT4G28390 ADP/ATP carrier 3 ADP/ATP carrier 3, ATAAC3 0.68 0.31 -0.29
10 AT5G58300 Leucine-rich repeat protein kinase family protein -0.68 0.32 -0.3
11 AT3G51860 cation exchanger 3 ATCAX3, ATHCX1, CAX1-LIKE, cation
exchanger 3		 0.68 0.3 -0.31
12 AT4G02980 endoplasmic reticulum auxin binding protein 1 ABP, endoplasmic reticulum auxin
binding protein 1		 0.68 0.33 -0.32
13 AT3G50480 homolog of RPW8 4 homolog of RPW8 4 0.67 0.31 -0.3
14 AT1G77810 Galactosyltransferase family protein 0.67 0.32 -0.32
15 AT4G35220 Cyclase family protein 0.67 0.32 -0.35
16 AT5G12850 CCCH-type zinc finger protein with ARM repeat domain -0.67 0.3 -0.28
17 AT3G03470 cytochrome P450, family 87, subfamily A, polypeptide 9 cytochrome P450, family 87,
subfamily A, polypeptide 9		 0.67 0.32 -0.33
18 AT3G15095 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 9762 Blast hits to 6439
proteins in 764 species: Archae - 77; Bacteria - 1339;
Metazoa - 3211; Fungi - 718; Plants - 437; Viruses - 131;
Other Eukaryotes - 3849 (source: NCBI BLink).		 high chlorophyll fluorescence 243 -0.66 0.29 -0.3
19 AT5G53550 YELLOW STRIPE like 3 YELLOW STRIPE LIKE 3, YELLOW
STRIPE like 3		 0.66 0.32 -0.31
20 AT5G25440 Protein kinase superfamily protein 0.65 0.3 -0.35
21 AT1G77250 RING/FYVE/PHD-type zinc finger family protein -0.65 0.29 -0.33
22 AT5G12170 CRT (chloroquine-resistance transporter)-like transporter 3 CRT (chloroquine-resistance
transporter)-like transporter 3		 0.65 0.35 -0.31
23 AT3G08680 Leucine-rich repeat protein kinase family protein -0.64 0.31 -0.34
24 AT4G32650 potassium channel in Arabidopsis thaliana 3 ARABIDOPSIS THALIANA K+ RECTIFYING
CHANNEL 1, A. thaliana
low-K+-tolerant 1, potassium
channel in Arabidopsis thaliana 3,
KC1		 0.64 0.29 -0.31
25 AT1G52880 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 18, ATNAM, NO APICAL
MERISTEM, NAC-REGULATED SEED
MORPHOLOGY 2		 0.64 0.32 -0.32
26 AT2G39210 Major facilitator superfamily protein 0.64 0.32 -0.33
27 AT2G27190 purple acid phosphatase 12 ARABIDOPSIS THALIANA PURPLE ACID
PHOSPHATASE 1, PURPLE ACID
PHOSPHATASE 12, PURPLE ACID
PHOSPHATASE 1, purple acid
phosphatase 12		 0.64 0.32 -0.3
28 AT1G80370 Cyclin A2;4 Cyclin A2;4 -0.63 0.32 -0.3
29 AT5G28010 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.63 0.32 -0.3
30 AT3G28940 AIG2-like (avirulence induced gene) family protein 0.62 0.3 -0.32
31 AT1G71040 Cupredoxin superfamily protein Low Phosphate Root2 0.62 0.33 -0.32
32 AT1G53310 phosphoenolpyruvate carboxylase 1 ATPEPC1, phosphoenolpyruvate
carboxylase 1,
PEP(PHOSPHOENOLPYRUVATE)
CARBOXYLASE 1, phosphoenolpyruvate
carboxylase 1		 0.62 0.31 -0.31
33 AT5G24210 alpha/beta-Hydrolases superfamily protein 0.62 0.36 -0.3
34 AT3G54420 homolog of carrot EP3-3 chitinase CHITINASE CLASS IV, homolog of
carrot EP3-3 chitinase, CHIV,
homolog of carrot EP3-3 chitinase		 0.61 0.3 -0.3
35 AT5G60690 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 INTERFASCICULAR FIBERLESS,
INTERFASCICULAR FIBERLESS 1,
REVOLUTA		 -0.61 0.32 -0.34
36 AT2G43350 glutathione peroxidase 3 glutathione peroxidase 3,
glutathione peroxidase 3		 0.61 0.33 -0.29
37 AT1G70140 formin 8 formin 8, formin 8 0.61 0.31 -0.31
38 AT5G38880 unknown protein; Has 474 Blast hits to 433 proteins in 138
species: Archae - 6; Bacteria - 80; Metazoa - 195; Fungi -
44; Plants - 59; Viruses - 0; Other Eukaryotes - 90
(source: NCBI BLink).		 -0.61 0.3 -0.29
39 AT3G63300 FORKED 1 FORKED 1 -0.61 0.3 -0.31
40 AT1G15790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15780.1); Has 170 Blast hits
to 94 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.3 -0.33
41 AT4G27480 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.6 0.32 -0.32
42 AT3G29035 NAC domain containing protein 3 Arabidopsis NAC domain containing
protein 59, NAC domain containing
protein 3, NAC domain containing
protein 3, ORE1 SISTER1		 0.59 0.3 -0.31
43 AT1G15570 CYCLIN A2;3 CYCLIN A2;3 -0.59 0.31 -0.33
44 AT5G12170 CRT (chloroquine-resistance transporter)-like transporter 3 CRT (chloroquine-resistance
transporter)-like transporter 3		 0.59 0.33 -0.32
45 AT2G22490 Cyclin D2;1 ATCYCD2;1, Cyclin D2;1 0.59 0.32 -0.32
46 AT5G53200 Homeodomain-like superfamily protein TRIPTYCHON -0.59 0.33 -0.31
47 AT5G25490 Ran BP2/NZF zinc finger-like superfamily protein -0.59 0.34 -0.35
48 AT2G44830 Protein kinase superfamily protein -0.58 0.34 -0.31
49 AT5G61480 Leucine-rich repeat protein kinase family protein PHLOEM INTERCALATED WITH XYLEM,
TDIF receptor		 -0.58 0.31 -0.3
50 AT2G27110 FAR1-related sequence 3 FAR1-related sequence 3 -0.58 0.3 -0.32
51 AT1G59530 basic leucine-zipper 4 basic leucine-zipper 4, basic
leucine-zipper 4		 -0.58 0.31 -0.31
52 AT4G18820 AAA-type ATPase family protein -0.57 0.31 -0.34
53 AT1G55550 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.55 0.31 -0.33
54 AT2G31440 INVOLVED IN: positive regulation of catalytic activity,
protein processing; LOCATED IN: integral to membrane;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Aph-1
(InterPro:IPR009294); Has 268 Blast hits to 262 proteins in
79 species: Archae - 0; Bacteria - 0; Metazoa - 212; Fungi
- 0; Plants - 34; Viruses - 0; Other Eukaryotes - 22
(source: NCBI BLink).		 -0.55 0.32 -0.34
55 AT1G27850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G40070.1); Has 9215
Blast hits to 5316 proteins in 473 species: Archae - 6;
Bacteria - 773; Metazoa - 3392; Fungi - 1710; Plants - 539;
Viruses - 143; Other Eukaryotes - 2652 (source: NCBI
BLink).		 -0.55 0.31 -0.3
56 AT3G09670 Tudor/PWWP/MBT superfamily protein -0.55 0.3 -0.3
57 AT4G18670 Leucine-rich repeat (LRR) family protein -0.54 0.32 -0.32
58 AT3G17160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 54259
Blast hits to 25265 proteins in 1209 species: Archae - 350;
Bacteria - 10795; Metazoa - 16137; Fungi - 8620; Plants -
3305; Viruses - 957; Other Eukaryotes - 14095 (source: NCBI
BLink).		 -0.54 0.33 -0.33
59 AT3G07210 unknown protein; Has 97 Blast hits to 85 proteins in 31
species: Archae - 0; Bacteria - 14; Metazoa - 7; Fungi -
19; Plants - 37; Viruses - 0; Other Eukaryotes - 20
(source: NCBI BLink).		 -0.54 0.32 -0.32
60 AT3G18160 peroxin 3-1 peroxin 3-1 -0.54 0.34 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
61 C0248 Sulfoquinovosyldiacylglycerol-36:3 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.75 0.51 -0.49 C0248
62 C0229 Robinin - - flavone biosynthesis -0.7 0.45 -0.45
63 C0019 1-O-β-Glucopyranosylsinapic acid 1-O-β-D-Glucopyranosylsinapic acid - phenylpropanoid pathwayl,
lignin biosynthesis 		-0.65 0.43 -0.42
64 C0089 Fortunellin - - - -0.63 0.45 -0.47
65 C0212 PR_MST_2336.8 - - - -0.59 0.43 -0.45
66 C0024 2-(Anilinomethyl)pyrrolidine (S)-(+)-2-(anilinomethyl)pyrrolidine - - -0.56 0.46 -0.41